BLASTX nr result
ID: Glycyrrhiza29_contig00028947
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00028947
(370 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium ... 74 3e-13
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ... 69 4e-11
GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterran... 65 5e-10
GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterran... 65 6e-10
ABD32401.2 Ribonuclease H, partial [Medicago truncatula] 61 1e-08
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum] 61 2e-08
GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterran... 60 6e-08
GAU39885.1 hypothetical protein TSUD_69330 [Trifolium subterraneum] 58 8e-08
GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterran... 59 8e-08
GAU12548.1 hypothetical protein TSUD_182620 [Trifolium subterran... 58 2e-07
GAU20193.1 hypothetical protein TSUD_352570 [Trifolium subterran... 56 3e-07
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran... 58 3e-07
GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterran... 57 5e-07
GAU35137.1 hypothetical protein TSUD_394630 [Trifolium subterran... 57 7e-07
GAU28886.1 hypothetical protein TSUD_293380 [Trifolium subterran... 56 1e-06
GAU26057.1 hypothetical protein TSUD_225190 [Trifolium subterran... 56 1e-06
GAU42251.1 hypothetical protein TSUD_327290 [Trifolium subterran... 55 2e-06
GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterran... 55 3e-06
GAU51832.1 hypothetical protein TSUD_324470 [Trifolium subterran... 54 4e-06
GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum] 54 8e-06
>GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
Length = 284
Score = 73.9 bits (180), Expect = 3e-13
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +2
Query: 59 WGRTGDKGL---LFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPRQT 229
W R GL F AG+ +++N C+ + F+++ EV +++ C+ R
Sbjct: 50 WLRNNSIGLNAPTFLAGLWWNWRARNIFCVGNASIHSFKVVAEVSKLVALIVFCFPARVH 109
Query: 230 PMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
RW+SWHP + + V+LNVDGS G+ RAG GGL R+ DG
Sbjct: 110 TDTPRRWISWHPCKTDCVVLNVDGSCLGDPGRAGFGGLFRKGDG 153
>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 68.9 bits (167), Expect = 4e-11
Identities = 36/100 (36%), Positives = 57/100 (57%)
Frame = +2
Query: 62 GRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPRQTPMIT 241
G G K +LF AG+ + +S+NA C+++E + + L + F + + C+ M++
Sbjct: 639 GLIGSKAILFAAGLWWIWRSRNARCMSEESMLLQRLAANITYFVDDINSCFFQPLPVMVS 698
Query: 242 VRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
R+V W+ S ILNVDGS G+ RAG GGL+R + G
Sbjct: 699 DRYVKWNNSNFNCTILNVDGSCIGSPIRAGFGGLIRNSVG 738
>GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterraneum]
Length = 357
Score = 65.5 bits (158), Expect = 5e-10
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +2
Query: 44 YLSMHWGRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCY-SP 220
Y+ + + + LLF AGI + +++NA C+ E++ L + +A +L CY +
Sbjct: 182 YVWLRYDLSSSALLLFIAGIWWIWRARNALCLDSEMISFCSLKLHIMDYALLLKNCYFNT 241
Query: 221 RQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
+TP T R V W+ +ILNVDGS GN +G GGL+R ADG
Sbjct: 242 HETP--TTRLVKWNVLGGTGMILNVDGSIIGNPGISGFGGLIRNADG 286
>GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterraneum]
Length = 1200
Score = 65.5 bits (158), Expect = 6e-10
Identities = 37/106 (34%), Positives = 57/106 (53%)
Frame = +2
Query: 44 YLSMHWGRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPR 223
Y +H G +LF AGI + +++NA C+ E+V + + +A +L CY
Sbjct: 1021 YAWLHNGLNSPTMMLFIAGIWWIWRARNAMCLDSEMVSFWSQKLRIMDYALLLKNCYFST 1080
Query: 224 QTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
+ T ++V W+ +ILNVDGS+ GN +G GGL+R ADG
Sbjct: 1081 HE-ISTTKFVKWNALGGTGLILNVDGSSIGNPGISGFGGLIRNADG 1125
>ABD32401.2 Ribonuclease H, partial [Medicago truncatula]
Length = 233
Score = 60.8 bits (146), Expect = 1e-08
Identities = 32/101 (31%), Positives = 51/101 (50%)
Frame = +2
Query: 62 GRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPRQTPMIT 241
G +G + +F AG+ V + +N C+ E + +F L + A+ ++ + P +
Sbjct: 3 GISGSRSSIFLAGLWWVWRHRNLMCLNNETLSLFRLCNNIISAADAANSAFNGEENPPHS 62
Query: 242 VRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADGL 364
R V W+ + ILNVDGS G R G GG+LR + GL
Sbjct: 63 DRLVKWNNRNHQDFILNVDGSCIGTPPRTGYGGVLRNSAGL 103
>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
Length = 724
Score = 60.8 bits (146), Expect = 2e-08
Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Frame = +2
Query: 5 DRGSPLHTDSSSAYLSMHWGRTG---DKGLLFTAGIGCVLKSKNATCITKELVQIFELLR 175
DR DSSS W R G LF A I + +++NA C+ EL+ F L
Sbjct: 480 DRNFFQEVDSSS------WLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELIPQFSLKM 533
Query: 176 EVRGFAEILLLCYSPRQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQA 355
+ +A +L C+ Q + + V W+ +ILNVDGS GN +G GGL+R A
Sbjct: 534 RIVDYALLLKNCHFNHQVTTLP-KIVRWNALGGTSMILNVDGSTIGNPGISGFGGLIRNA 592
Query: 356 DG 361
DG
Sbjct: 593 DG 594
>GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterraneum]
Length = 458
Score = 59.7 bits (143), Expect = 6e-08
Identities = 35/116 (30%), Positives = 55/116 (47%)
Frame = +2
Query: 14 SPLHTDSSSAYLSMHWGRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFA 193
+P SS A+ + +G TG + F+ + + +N C+ E I L ++ +
Sbjct: 212 TPDFFSSSDAHEWLKFGSTGSQAFAFSTSVWWAWRHQNLMCLQNETWSINRLSFNIQSMS 271
Query: 194 EILLLCYSPRQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
+ C+S R T V W+ + VILNVDGS G+ RAG GG++R G
Sbjct: 272 ATITSCFSSRSTTTSEEIHVKWNNNNFPGVILNVDGSCLGSPVRAGFGGVIRNESG 327
>GAU39885.1 hypothetical protein TSUD_69330 [Trifolium subterraneum]
Length = 178
Score = 57.8 bits (138), Expect = 8e-08
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +2
Query: 170 LREVRGFAEILLLCYSPRQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLR 349
L EV +++ C+ R RW+SWH + + V+LNVDGS G+ RAG GGL R
Sbjct: 40 LAEVSKLVALIVSCFPARVRTDTPRRWISWHSCKTDCVVLNVDGSCLGDPGRAGFGGLFR 99
Query: 350 QADG 361
+ DG
Sbjct: 100 KGDG 103
>GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterraneum]
Length = 440
Score = 59.3 bits (142), Expect = 8e-08
Identities = 36/113 (31%), Positives = 59/113 (52%)
Frame = +2
Query: 23 HTDSSSAYLSMHWGRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEIL 202
H D+ A+L G +F A + + +++N C+ ELV F + R + +A ++
Sbjct: 201 HGDNLYAWLRK--GCDSPSMFMFLAALWWIWRARNKLCLANELVSPFTISRCIEDYALLV 258
Query: 203 LLCYSPRQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
CYS +++ + R V W+ +ILNVDGS+ GN G GGL+R + G
Sbjct: 259 KKCYSQQKSTLAN-RLVRWNAHDGTDMILNVDGSSIGNPEIYGFGGLIRNSHG 310
>GAU12548.1 hypothetical protein TSUD_182620 [Trifolium subterraneum]
Length = 236
Score = 57.8 bits (138), Expect = 2e-07
Identities = 35/107 (32%), Positives = 54/107 (50%)
Frame = +2
Query: 41 AYLSMHWGRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSP 220
AY + + + LLF AGI + + +N C+ E++ L + +A +L CY
Sbjct: 58 AYSWLRYDLSSSALLLFIAGIWWIWRVRNVLCLDSEMISFCPLKLRIMDYALLLKNCYFN 117
Query: 221 RQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
+IT + V W+ +ILNVDGS+ GN + GL+R ADG
Sbjct: 118 THETLIT-KLVKWNALGGTGMILNVDGSSIGNPSISSFRGLIRNADG 163
>GAU20193.1 hypothetical protein TSUD_352570 [Trifolium subterraneum]
Length = 171
Score = 56.2 bits (134), Expect = 3e-07
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +2
Query: 242 VRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
+RW+SWHPSR+E +LNVDGS G R G GGL+R DG
Sbjct: 1 MRWISWHPSRQEGYVLNVDGSCLGASGRTGFGGLIRMGDG 40
>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
Length = 545
Score = 57.8 bits (138), Expect = 3e-07
Identities = 32/97 (32%), Positives = 49/97 (50%)
Frame = +2
Query: 71 GDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPRQTPMITVRW 250
G LF A + + ++N C+ E + F L A++L +C+ +Q T
Sbjct: 320 GPSSFLFMAAVWWIWCARNQLCMDNEAISYFTLRTNTENLAQLLRMCFI-KQNISSTATM 378
Query: 251 VSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
V W+ +ILNVDGS+ GN +G GGL+R +DG
Sbjct: 379 VRWNAHGGIGMILNVDGSSIGNPGISGFGGLIRNSDG 415
>GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterraneum]
Length = 968
Score = 57.0 bits (136), Expect = 5e-07
Identities = 33/116 (28%), Positives = 52/116 (44%)
Frame = +2
Query: 14 SPLHTDSSSAYLSMHWGRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFA 193
+P + Y + G TG + L+F+AG+ + +N + E + L +R
Sbjct: 722 NPNFFSNMDVYDWLKMGATGTQSLIFSAGVWWSWRHRNLMSLNNETWTLSRLSFNIRSMV 781
Query: 194 EILLLCYSPRQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
E C +P R++ W + ILNVDGS G+ RAG GG++R G
Sbjct: 782 ETFKNCCTPVSNVGSVDRFIKWKNNNFSCTILNVDGSCLGSPARAGFGGIIRNTFG 837
>GAU35137.1 hypothetical protein TSUD_394630 [Trifolium subterraneum]
Length = 547
Score = 56.6 bits (135), Expect = 7e-07
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +2
Query: 50 SMHWGRTG---DKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSP 220
S W R G +F A + + +++NA C+ EL+ +F L + +A +L C S
Sbjct: 368 SYDWLRNGLSFPSMFIFLAAVWWIWRARNALCLNSELIPLFALKLRIMDYALLLRNCQSN 427
Query: 221 RQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
I + V W+ ++ ILNV+GS+ GN G GGL+R ADG
Sbjct: 428 LHETSIP-KLVKWNAGGTDM-ILNVEGSSIGNPGIYGFGGLIRNADG 472
>GAU28886.1 hypothetical protein TSUD_293380 [Trifolium subterraneum]
Length = 286
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +2
Query: 35 SSAYLSMHWGRTGDKGLLFT--AGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLL 208
S A+ + +G TG + F+ AG+ + +N C+ E I L ++ +
Sbjct: 45 SDAHEWLKFGSTGSQAFAFSFSAGVWWAWRHRNLMCLQNETWSINRLSFNIQSMIATITS 104
Query: 209 CYSPRQTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
C+S R T + W+ + VILNVDGS G+ RAG GG++R G
Sbjct: 105 CFSSRSTTTSEEIHIKWNNNNFPGVILNVDGSCLGSPVRAGFGGVIRNESG 155
>GAU26057.1 hypothetical protein TSUD_225190 [Trifolium subterraneum]
Length = 536
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/92 (33%), Positives = 50/92 (54%)
Frame = +2
Query: 86 LFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPRQTPMITVRWVSWHP 265
LF A I + +++NA C+ + + + L + +A ++ C+S T + V W+
Sbjct: 371 LFMATIWWIWRTRNALCLNSDPIPFYSLKLRIMDYALLIENCHSNHHDTS-TSKLVKWNV 429
Query: 266 SREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
+ILNVDGS+ GN +G GGL+R ADG
Sbjct: 430 LGGTSMILNVDGSSLGNPGISGFGGLIRNADG 461
>GAU42251.1 hypothetical protein TSUD_327290 [Trifolium subterraneum]
Length = 269
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/98 (29%), Positives = 46/98 (46%)
Frame = +2
Query: 68 TGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPRQTPMITVR 247
TG L+F+AG+ + +N C+ E + L +R E +SP + R
Sbjct: 26 TGSHALIFSAGVWWSWQHRNLMCLQNETWSLSRLSFSIRAMVETFKNYFSPASNEALVER 85
Query: 248 WVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
++ W+ VILNVD S + R+G GG++R G
Sbjct: 86 YIKWNHKNYSCVILNVDESCLDSPIRSGFGGIIRNTFG 123
>GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterraneum]
Length = 1049
Score = 55.1 bits (131), Expect = 3e-06
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 59 WGRTG---DKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPRQT 229
W R G LF A I + +++NA C+ E + + L + +A ++ C+S
Sbjct: 817 WIRNGLHCSSMFLFMATIWWIWRARNALCLNSESILFYSLKLRIMDYALLIENCHSNHHD 876
Query: 230 PMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
T + V W+ +ILNVDGS+ GN +G GGL+ ADG
Sbjct: 877 TS-TSKLVKWNALGGTGMILNVDGSSLGNPGISGFGGLIHNADG 919
>GAU51832.1 hypothetical protein TSUD_324470 [Trifolium subterraneum]
Length = 209
Score = 53.5 bits (127), Expect = 4e-06
Identities = 32/95 (33%), Positives = 46/95 (48%)
Frame = +2
Query: 62 GRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPRQTPMIT 241
G TG + F AG+ V + +N C+ E I L ++ I+ C+S R T
Sbjct: 5 GSTGSQPFAFYAGVLWVWRLRNLMCLQNETWSINRLSFNIQSMIVIITSCFSSRSTTTSE 64
Query: 242 VRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLL 346
V W+ + VILNVD S G+ RAG GG++
Sbjct: 65 EIHVKWNNNNYSSVILNVDESCLGSHIRAGFGGVI 99
>GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum]
Length = 521
Score = 53.5 bits (127), Expect = 8e-06
Identities = 33/106 (31%), Positives = 50/106 (47%)
Frame = +2
Query: 44 YLSMHWGRTGDKGLLFTAGIGCVLKSKNATCITKELVQIFELLREVRGFAEILLLCYSPR 223
Y+ + G LLFTA I + ++N C+ E + L + +A +L C
Sbjct: 287 YVWLWNGLDSPSKLLFTAAIWWIWCTRNNLCMNNESISQVSLRMRIEDYAHLLRACLF-N 345
Query: 224 QTPMITVRWVSWHPSREEIVILNVDGSNRGNLRRAGVGGLLRQADG 361
Q M + V W+ +ILNVDGS+ GN +G GGL+ + G
Sbjct: 346 QITMSNTKLVKWNALGSPDMILNVDGSSIGNPGVSGFGGLIHNSKG 391