BLASTX nr result

ID: Glycyrrhiza29_contig00028491 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00028491
         (271 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003589367.1 F-box associated domain protein [Medicago truncat...    81   4e-17
XP_003589364.1 F-box protein interaction domain protein [Medicag...    78   4e-15
XP_003588608.1 F-box protein interaction domain protein [Medicag...    76   3e-14
XP_013466093.1 F-box protein interaction domain protein [Medicag...    72   1e-12
XP_013466076.1 F-box protein [Medicago truncatula] KEH40115.1 F-...    65   1e-10
GAU28942.1 hypothetical protein TSUD_59550 [Trifolium subterraneum]    65   2e-10
XP_013466178.1 transmembrane protein, putative [Medicago truncat...    63   2e-10
GAU40521.1 hypothetical protein TSUD_92930 [Trifolium subterraneum]    64   4e-10
GAU44490.1 hypothetical protein TSUD_13010 [Trifolium subterraneum]    59   1e-08
XP_003607609.1 F-box protein interaction domain protein [Medicag...    55   8e-07
XP_013466878.1 F-box protein interaction domain protein [Medicag...    52   7e-06

>XP_003589367.1 F-box associated domain protein [Medicago truncatula] AES59618.1
           F-box associated domain protein [Medicago truncatula]
          Length = 180

 Score = 80.9 bits (198), Expect = 4e-17
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = +2

Query: 5   VWVMDQRAWAMKYRIGPIGPEVQILGIWIKDGARVLGGKVGELLTSYDQDGNPVHQFQIK 184
           +WVMDQ  W   Y IGP+    ++ G+W K+  ++LGGK G+ LTSYD  GN + QFQI 
Sbjct: 94  IWVMDQSGWRKMYNIGPVFSMFRMFGLW-KNSNQLLGGKFGKPLTSYDHQGNSLCQFQID 152

Query: 185 VRPRDQYELCLHDYVQSIAPLST 253
           V   D     +H+YV SIAPLST
Sbjct: 153 V--DDTEHFWIHEYVPSIAPLST 173


>XP_003589364.1 F-box protein interaction domain protein [Medicago truncatula]
           AES59615.1 F-box protein interaction domain protein
           [Medicago truncatula]
          Length = 353

 Score = 78.2 bits (191), Expect = 4e-15
 Identities = 41/82 (50%), Positives = 52/82 (63%)
 Frame = +2

Query: 5   VWVMDQRAWAMKYRIGPIGPEVQILGIWIKDGARVLGGKVGELLTSYDQDGNPVHQFQIK 184
           +WVMDQ  W  K  IGP+    ++ G+W K+G ++LGGKVGE LTSYD  G  ++QFQI 
Sbjct: 277 IWVMDQSGWHKKCNIGPLVSMFRMCGLW-KNGDQILGGKVGEPLTSYDYQGKSLYQFQID 335

Query: 185 VRPRDQYELCLHDYVQSIAPLS 250
           V          H+YV SIAPLS
Sbjct: 336 VDYTK-----FHEYVPSIAPLS 352


>XP_003588608.1 F-box protein interaction domain protein [Medicago truncatula]
           AES58859.1 F-box protein interaction domain protein
           [Medicago truncatula]
          Length = 379

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 5   VWVMDQRAWAMKYRIGPIGPEVQILGIWIKDGARVLGGKVGELLTSYDQDGNPVHQFQIK 184
           +W+MDQ  W   Y IGP+     I   W KDG +V GGKVG+LL SYD  GN +  FQI 
Sbjct: 299 IWIMDQNRWTKIYNIGPVPWTCCISDFW-KDGDQVFGGKVGKLLASYDDQGNSLSDFQIY 357

Query: 185 VRPRDQYELCL--HDYVQSIAPLST 253
           V     Y  CL   +Y+QSI PLST
Sbjct: 358 VL---NYYRCLWGSEYLQSITPLST 379


>XP_013466093.1 F-box protein interaction domain protein [Medicago truncatula]
           KEH40132.1 F-box protein interaction domain protein
           [Medicago truncatula]
          Length = 380

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   VWVMDQR-AWAMKYRIGPIGPEVQILGIWIKDGARVLGGKVGELLTSYDQDGNPVHQFQI 181
           +WVMD R  W  KY I P     ++ G+W K+G ++LGG+ GELL SYD  GN + QFQI
Sbjct: 290 IWVMDHRNGWEKKYNIVPPLFNFRMCGLW-KNGDQLLGGRAGELLRSYDHQGNSLCQFQI 348

Query: 182 KVRPRDQYELCLHDYVQSIAPLST*LGE 265
            V     +   +H+YV SIAPLS  L +
Sbjct: 349 DVDYAKYF--WIHEYVPSIAPLSAYLAK 374


>XP_013466076.1 F-box protein [Medicago truncatula] KEH40115.1 F-box protein
           [Medicago truncatula]
          Length = 322

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/52 (57%), Positives = 35/52 (67%)
 Frame = +2

Query: 5   VWVMDQRAWAMKYRIGPIGPEVQILGIWIKDGARVLGGKVGELLTSYDQDGN 160
           +W+MDQ  WA KY IGP+       G W KDG RV GGKVG+LLTSY+  GN
Sbjct: 261 IWIMDQSGWAKKYNIGPVEWTCCRRGFW-KDGDRVFGGKVGQLLTSYEDQGN 311


>GAU28942.1 hypothetical protein TSUD_59550 [Trifolium subterraneum]
          Length = 351

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 34/82 (41%), Positives = 48/82 (58%)
 Frame = +2

Query: 5   VWVMDQRAWAMKYRIGPIGPEVQILGIWIKDGARVLGGKVGELLTSYDQDGNPVHQFQIK 184
           +WVMDQ  W+ KY I      ++  G+   D A + GGK GELL SYD  G  + QFQI+
Sbjct: 274 IWVMDQNEWSKKYEIQTSMCNLRRFGV---DAAEIFGGKAGELLKSYDHHGKKLRQFQIE 330

Query: 185 VRPRDQYELCLHDYVQSIAPLS 250
           +   D ++  +++YV SI  LS
Sbjct: 331 IPETDYFK--IYEYVPSITLLS 350


>XP_013466178.1 transmembrane protein, putative [Medicago truncatula] KEH40219.1
           transmembrane protein, putative [Medicago truncatula]
          Length = 155

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = +2

Query: 5   VWVMDQRAWAMKYRIGPIGPEV---QILGIWIKDGARVLGGKVGELLTSYDQDGNPVHQF 175
           +WVMDQ  W  KY I  IGP V   ++LG+W K+G  +LGGK GE L SYD  GN + QF
Sbjct: 90  IWVMDQSGWHKKYNI--IGPPVSMSRMLGLW-KNGDELLGGKFGEPLKSYDHQGNSLCQF 146

Query: 176 QI 181
           QI
Sbjct: 147 QI 148


>GAU40521.1 hypothetical protein TSUD_92930 [Trifolium subterraneum]
          Length = 331

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +2

Query: 5   VWVMDQRAWAMKYRIG-PIGPEVQILGIWIKDGARVLGGKVGELLTSYDQDGNPVHQFQI 181
           +WVMDQ  W+ KY I  P        G W  DGA +LG  VGELL SYD  GN + +FQI
Sbjct: 255 IWVMDQNKWSKKYNINNPFTSMFGTCGPW-NDGAEILGANVGELLASYDHHGNKLRKFQI 313

Query: 182 KVRPRDQYELCLHDYVQSIAPLS 250
                +     +++YV SIA LS
Sbjct: 314 -----EYGYFMIYEYVPSIALLS 331


>GAU44490.1 hypothetical protein TSUD_13010 [Trifolium subterraneum]
          Length = 169

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
 Frame = +2

Query: 5   VWVMD-QRAWAMKYRIGPIGPEVQILGIWIK--DGARVLGGKVGELLTSYDQDGNPVHQF 175
           +WVMD Q  W   Y + P+   +    ++ K  +G + LGGK G+ LT YD  GN + QF
Sbjct: 85  IWVMDKQHQWTKVYNLVPLELAITKHAMFCKGKNGVQFLGGKPGQPLTLYDHHGNLLRQF 144

Query: 176 QIKVRPRDQYELCLHDYVQSIAPLS 250
           QI +         +H+YVQSIAPLS
Sbjct: 145 QILLHDLLD-SFLVHEYVQSIAPLS 168


>XP_003607609.1 F-box protein interaction domain protein [Medicago truncatula]
           AES89806.1 F-box protein interaction domain protein
           [Medicago truncatula]
          Length = 350

 Score = 55.1 bits (131), Expect = 8e-07
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +2

Query: 5   VWVMDQRAWAMKYRIGPIGPEVQILGIWIKDGARVLGGKVGE-LLTSYDQDGNPVHQFQI 181
           +W ++Q  WA KY I        I G+W  DGA +L G+ G+  LTS D  GN + QFQ+
Sbjct: 270 IWTLEQNGWAKKYNIDTKMSIFHIYGLW-NDGAEILVGEFGQRQLTSCDHHGNVLRQFQL 328

Query: 182 KVRPRDQYELCLHDYVQSIAPLS 250
                  +    ++YV S+APLS
Sbjct: 329 DTLENACF--WYYEYVPSMAPLS 349


>XP_013466878.1 F-box protein interaction domain protein [Medicago truncatula]
           KEH40919.1 F-box protein interaction domain protein
           [Medicago truncatula]
          Length = 401

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
 Frame = +2

Query: 5   VWVMDQ-RAWAMKYRIGPIGPEV---QILGIWIKDGARVLGGKVGELLTSYDQDGNPVHQ 172
           +WVMD+   W   Y    +         +    K+G + LGGK G+LLT YD  GN + Q
Sbjct: 316 IWVMDKLNGWTKLYNFVSLDSTYIHKHAICKGKKNGVQFLGGKPGQLLTLYDHHGNSLQQ 375

Query: 173 FQIKVRP-RDQYELCLHDYVQSIAPLS 250
           FQI +    D +   +H+YV+SIAPLS
Sbjct: 376 FQIVLHGILDAF--LVHEYVKSIAPLS 400


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