BLASTX nr result

ID: Glycyrrhiza29_contig00028168 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00028168
         (346 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KRH04768.1 hypothetical protein GLYMA_17G185400 [Glycine max]          96   4e-24
ERN11849.1 hypothetical protein AMTR_s00020p00100020 [Amborella ...    64   1e-11
CAN65166.1 hypothetical protein VITISV_029400 [Vitis vinifera]         68   2e-11
XP_012436112.1 PREDICTED: ribosomal protein S10, mitochondrial [...    54   2e-06

>KRH04768.1 hypothetical protein GLYMA_17G185400 [Glycine max]
          Length = 62

 Score = 96.3 bits (238), Expect = 4e-24
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = -1

Query: 346 PTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGFTKRLSTVHSR 212
           PTEARKPPSCPRSHSVNRKGKPTHP APLVDRCGFTKRL TVHSR
Sbjct: 18  PTEARKPPSCPRSHSVNRKGKPTHPLAPLVDRCGFTKRLGTVHSR 62


>ERN11849.1 hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
          Length = 85

 Score = 63.9 bits (154), Expect(2) = 1e-11
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = -1

Query: 346 PTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGF 242
           PTEA K PSCP+SHSVNRKGKPTHPSAPLVD   F
Sbjct: 37  PTEACKLPSCPKSHSVNRKGKPTHPSAPLVDAVWF 71



 Score = 33.1 bits (74), Expect(2) = 1e-11
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 245 FYEASKHSSLALINQ 201
           FYEASKHSSLALINQ
Sbjct: 71  FYEASKHSSLALINQ 85


>CAN65166.1 hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/50 (70%), Positives = 37/50 (74%)
 Frame = -3

Query: 326 PIVSQITFRKSKGEAYXXXXXXXXXXRFYEASKHSSLALINQELCRHSLR 177
           P  +QITFR+SKGEAY          RFYEASKHSSLALINQE CRHSLR
Sbjct: 140 PSCTQITFRESKGEAYSSISSSRRSVRFYEASKHSSLALINQEFCRHSLR 189


>XP_012436112.1 PREDICTED: ribosomal protein S10, mitochondrial [Gossypium
           raimondii]
          Length = 171

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +2

Query: 20  CDLEDIRLLGQAKKIAVRMLLPHHAWPFTLP 112
           CDL DIRLLGQAK ++ R+LLPHHA PFTLP
Sbjct: 105 CDLGDIRLLGQAKNLSDRVLLPHHARPFTLP 135


Top