BLASTX nr result

ID: Glycyrrhiza29_contig00027299 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00027299
         (208 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003612076.1 GRF zinc finger protein [Medicago truncatula] AES...    58   3e-09
XP_013468565.1 GRF zinc finger protein [Medicago truncatula] KEH...    57   5e-09
XP_003593148.1 GRF zinc finger protein [Medicago truncatula] AES...    57   6e-09
XP_003628960.1 GRF zinc finger protein [Medicago truncatula] AET...    57   1e-08
XP_013459499.1 GRF zinc finger protein [Medicago truncatula] KEH...    55   6e-08
XP_003589792.2 GRF zinc finger protein [Medicago truncatula] AES...    50   3e-06

>XP_003612076.1 GRF zinc finger protein [Medicago truncatula] AES95034.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 116

 Score = 58.2 bits (139), Expect = 3e-09
 Identities = 26/47 (55%), Positives = 37/47 (78%)
 Frame = +2

Query: 8   GTFFQVDGKRSCSFFRWYDGEVNERERKIIKGLLRKYEAMKSRERFL 148
           G +FQ   +R CSFFRW+D EV ER++K+I+GLL+K +AMK +E+ L
Sbjct: 48  GKYFQ---RRKCSFFRWFDPEVPERQKKLIRGLLKKNDAMKKKEKKL 91


>XP_013468565.1 GRF zinc finger protein [Medicago truncatula] KEH42602.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 115

 Score = 57.4 bits (137), Expect = 5e-09
 Identities = 24/56 (42%), Positives = 41/56 (73%)
 Frame = +2

Query: 32  KRSCSFFRWYDGEVNERERKIIKGLLRKYEAMKSRERFLVAGCVLVSNFHLSVVIV 199
           +R CSFFRW+D EV +R++K+I+GLL+K +A+K++E+ L+   V++       V+V
Sbjct: 54  RRKCSFFRWFDPEVPDRQKKLIRGLLKKNDALKNKEKMLLLTIVILGMLLFVSVLV 109


>XP_003593148.1 GRF zinc finger protein [Medicago truncatula] AES63399.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 116

 Score = 57.4 bits (137), Expect = 6e-09
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = +2

Query: 8   GTFFQVDGKRSCSFFRWYDGEVNERERKIIKGLLRKYEAMKSRERFL 148
           G +FQ   +R CSFFRW+D EV ER +K+I+GLL+K +AMK +E+ L
Sbjct: 48  GKYFQ---RRKCSFFRWFDPEVPERRKKLIRGLLKKNDAMKKKEKKL 91


>XP_003628960.1 GRF zinc finger protein [Medicago truncatula] AET03436.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 114

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = +2

Query: 32  KRSCSFFRWYDGEVNERERKIIKGLLRKYEAMKSRERFLV 151
           +R C+FFRWYD EV +R+ KII+GLLRK + +K +ER LV
Sbjct: 52  RRKCNFFRWYDPEVPDRQNKIIRGLLRKNDELKKKERSLV 91


>XP_013459499.1 GRF zinc finger protein [Medicago truncatula] KEH33530.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 153

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +2

Query: 32  KRSCSFFRWYDGEVNERERKIIKGLLRKYEAMKSRERFLVAGCVLV 169
           KR C+FFRWYD EV +R++KII+ LLRK + +K +ER  V   V++
Sbjct: 89  KRKCNFFRWYDPEVPDRQKKIIRELLRKNDELKKKERSFVIAIVVL 134


>XP_003589792.2 GRF zinc finger protein [Medicago truncatula] AES60043.2 GRF zinc
           finger protein [Medicago truncatula]
          Length = 114

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
 Frame = +2

Query: 8   GTFFQVDGKRSCSFFRWYDGEVNERERKIIKGLLRKYEAMKSRER-----FLVAGCVLVS 172
           G +FQ   +R C FFR +D EV +R++KII+GLL+K +A++ +ER      ++ G +L+ 
Sbjct: 47  GRYFQ---RRKCKFFRRFDPEVPDRQKKIIRGLLKKNDALRKKERTHVSIIVILGVLLLL 103

Query: 173 NF 178
           +F
Sbjct: 104 SF 105


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