BLASTX nr result
ID: Glycyrrhiza29_contig00026200
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00026200
(254 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_063618977.1 integrase [Bradyrhizobium sp. th.b2] 85 2e-29
WP_063711789.1 integrase, partial [Bradyrhizobium japonicum] 84 3e-29
WP_074130200.1 hypothetical protein [Bradyrhizobium sp. NAS96.2] 84 5e-29
SED09430.1 Integrase [Bradyrhizobium erythrophlei] 79 7e-28
WP_011474280.1 integrase [Rhodopseudomonas palustris] ABD89398.1... 78 3e-27
SFN38917.1 Integrase [Bradyrhizobium sp. Rc3b] 80 1e-26
WP_011665382.1 integrase [Rhodopseudomonas palustris] ABJ07920.1... 67 1e-21
WP_044406634.1 integrase [Rhodopseudomonas palustris] KIZ47274.1... 70 1e-21
WP_011159617.1 integrase [Rhodopseudomonas palustris] CAE29523.1... 71 5e-21
WP_057846118.1 hypothetical protein [Bradyrhizobium retamae] KRR... 77 4e-19
OJY45816.1 integrase [Rhizobiales bacterium 64-17] 60 2e-17
WP_011924398.1 integrase [Bradyrhizobium sp. ORS 278] CAL75161.1... 59 2e-17
WP_076829842.1 integrase [Bradyrhizobium sp. UFLA 03-321] OMI058... 84 5e-17
WP_009030750.1 integrase [Bradyrhizobium sp. ORS 375] CCD95844.1... 58 9e-17
WP_057741322.1 integrase [Bradyrhizobium manausense] KRQ17114.1 ... 83 9e-17
SFP95956.1 Site-specific recombinase XerD [Bradyrhizobium sp. Ghvi] 80 6e-16
WP_057018951.1 integrase [Bradyrhizobium pachyrhizi] KRP90021.1 ... 54 3e-13
WP_024879647.1 MULTISPECIES: hypothetical protein [Methylosinus]... 48 5e-11
WP_018045697.1 hypothetical protein [Methylobacterium sp. 88A] 55 3e-10
WP_051881864.1 hypothetical protein [Parvularcula oceani] 52 4e-10
>WP_063618977.1 integrase [Bradyrhizobium sp. th.b2]
Length = 408
Score = 84.7 bits (208), Expect(2) = 2e-29
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
P APWTPELARREAKRLLGLVANGKDPADEKAKARLQA DTL VI
Sbjct: 65 PHGAPWTPELARREAKRLLGLVANGKDPADEKAKARLQAADTLLVI 110
Score = 72.0 bits (175), Expect(2) = 2e-29
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
REAVRGFGVRR+RDQATYV+KYR FGRQRFVTIGPH
Sbjct: 31 REAVRGFGVRRQRDQATYVLKYRVFGRQRFVTIGPH 66
>WP_063711789.1 integrase, partial [Bradyrhizobium japonicum]
Length = 418
Score = 84.0 bits (206), Expect(2) = 3e-29
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
P APWTPELARREAKRLLGLVANGKDPADEKAKARLQ+ DTL VI
Sbjct: 60 PHGAPWTPELARREAKRLLGLVANGKDPADEKAKARLQSADTLRVI 105
Score = 72.0 bits (175), Expect(2) = 3e-29
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
REAVRGFGVRR+RDQATYV+KYR FGRQRFVTIGPH
Sbjct: 26 REAVRGFGVRRQRDQATYVLKYRVFGRQRFVTIGPH 61
>WP_074130200.1 hypothetical protein [Bradyrhizobium sp. NAS96.2]
Length = 240
Score = 83.6 bits (205), Expect(2) = 5e-29
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
P APWTPELAR+EAKRLLGLVANGKDPADE++KARLQA DTLSVI
Sbjct: 60 PHGAPWTPELARKEAKRLLGLVANGKDPADERSKARLQAADTLSVI 105
Score = 71.6 bits (174), Expect(2) = 5e-29
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
REAVRGFGVRR+RDQATYV+KYR FGRQRFVTIGPH
Sbjct: 26 REAVRGFGVRRQRDQATYVLKYRLFGRQRFVTIGPH 61
>SED09430.1 Integrase [Bradyrhizobium erythrophlei]
Length = 419
Score = 79.3 bits (194), Expect(2) = 7e-28
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
P APWTPELARREAKRLLGLVA+GKDPADEK KARLQA DTL I
Sbjct: 60 PHGAPWTPELARREAKRLLGLVASGKDPADEKNKARLQAADTLRAI 105
Score = 72.0 bits (175), Expect(2) = 7e-28
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
REAVRGFGVRR+RDQATYV+KYR FGRQRFVTIGPH
Sbjct: 26 REAVRGFGVRRQRDQATYVLKYRVFGRQRFVTIGPH 61
>WP_011474280.1 integrase [Rhodopseudomonas palustris] ABD89398.1 phage integrase
[Rhodopseudomonas palustris BisB18]
Length = 400
Score = 77.8 bits (190), Expect(2) = 3e-27
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
P +PWTPELAR+EAKRLLGLVA GKDPADEKAKARLQA DTL I
Sbjct: 60 PHGSPWTPELARKEAKRLLGLVAIGKDPADEKAKARLQAADTLRAI 105
Score = 71.6 bits (174), Expect(2) = 3e-27
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
REAVRGFGVRR+RDQATYV+KYR FGRQRFVTIGPH
Sbjct: 26 REAVRGFGVRRQRDQATYVLKYRLFGRQRFVTIGPH 61
>SFN38917.1 Integrase [Bradyrhizobium sp. Rc3b]
Length = 405
Score = 80.1 bits (196), Expect(2) = 1e-26
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = -2
Query: 130 APWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
APWTPELAR+EAKRLLG+VANGKDPADEKAKARLQA DTL I
Sbjct: 63 APWTPELARKEAKRLLGIVANGKDPADEKAKARLQAADTLRTI 105
Score = 67.4 bits (163), Expect(2) = 1e-26
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
REAVRGFGVRR+RDQATYV+KYR FGRQRF TIG H
Sbjct: 26 REAVRGFGVRRQRDQATYVLKYRVFGRQRFATIGAH 61
>WP_011665382.1 integrase [Rhodopseudomonas palustris] ABJ07920.1 phage integrase
family protein [Rhodopseudomonas palustris BisA53]
Length = 409
Score = 67.4 bits (163), Expect(2) = 1e-21
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
P +PWTPE AR+EAKRLLGLVA+GKDPAD++ +A L+A DTL I
Sbjct: 57 PHGSPWTPERARKEAKRLLGLVADGKDPADQRTQAALEAADTLRKI 102
Score = 62.8 bits (151), Expect(2) = 1e-21
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
REAVRGFGVRR+R YV+KYR FGRQRF TIGPH
Sbjct: 23 REAVRGFGVRRQRGAPVYVVKYRAFGRQRFFTIGPH 58
>WP_044406634.1 integrase [Rhodopseudomonas palustris] KIZ47274.1 integrase
[Rhodopseudomonas palustris]
Length = 408
Score = 70.5 bits (171), Expect(2) = 1e-21
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTL 11
P +PWTPE ARREAKRLLGLVA+GKDPAD++A+A LQA DTL
Sbjct: 60 PHGSPWTPERARREAKRLLGLVADGKDPADKRAEAALQAADTL 102
Score = 59.7 bits (143), Expect(2) = 1e-21
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
REAVRGFGVRR+R YV+KYR GRQRF TIGPH
Sbjct: 26 REAVRGFGVRRQRGAPVYVLKYRAHGRQRFFTIGPH 61
>WP_011159617.1 integrase [Rhodopseudomonas palustris] CAE29523.1 possible
phage-like integrase [Rhodopseudomonas palustris CGA009]
Length = 408
Score = 70.9 bits (172), Expect(2) = 5e-21
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTL 11
P +PWTPE ARREAKRLLGLVA+GKDPAD++A+A LQA DTL
Sbjct: 60 PHGSPWTPERARREAKRLLGLVADGKDPADDRAEAALQAADTL 102
Score = 57.4 bits (137), Expect(2) = 5e-21
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
R AVRGFGVRR+R YV+KYR GRQRF TIGPH
Sbjct: 26 RAAVRGFGVRRQRGAPVYVLKYRAHGRQRFFTIGPH 61
>WP_057846118.1 hypothetical protein [Bradyrhizobium retamae] KRR20790.1
hypothetical protein CQ13_32165 [Bradyrhizobium retamae]
Length = 96
Score = 77.4 bits (189), Expect(2) = 4e-19
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTL 11
P APWTPELAR+EAKRLLGLVANGKDP DEKAKARLQA D L
Sbjct: 40 PHGAPWTPELARKEAKRLLGLVANGKDPVDEKAKARLQAADPL 82
Score = 44.7 bits (104), Expect(2) = 4e-19
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -3
Query: 198 QATYVIKYRGFGRQRFVTIGPH 133
+ATYV+KYR FGRQRFVTIGPH
Sbjct: 20 KATYVLKYRVFGRQRFVTIGPH 41
>OJY45816.1 integrase [Rhizobiales bacterium 64-17]
Length = 407
Score = 59.7 bits (143), Expect(2) = 2e-17
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = -2
Query: 130 APWTPELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
APWTPE ARREAKRL GLVA GKDP EKA A+ T TL I
Sbjct: 63 APWTPETARREAKRLFGLVATGKDPQIEKATAKENGTFTLRTI 105
Score = 56.6 bits (135), Expect(2) = 2e-17
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = -3
Query: 237 EAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
EAV+GFGVRR++ YVIKYR FGRQRFVTIG H
Sbjct: 27 EAVKGFGVRRQKGNPVYVIKYRVFGRQRFVTIGRH 61
>WP_011924398.1 integrase [Bradyrhizobium sp. ORS 278] CAL75161.1 putative
phage-like integrase [Bradyrhizobium sp. ORS 278]
Length = 424
Score = 59.3 bits (142), Expect(2) = 2e-17
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDT 14
P +PWTPE AR+EAKRLLGLVA GKDPA E+ LQ DT
Sbjct: 60 PHGSPWTPEKARKEAKRLLGLVAQGKDPAAERELLTLQTADT 101
Score = 56.6 bits (135), Expect(2) = 2e-17
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
+EAVRGFGVRR+R YV+K+R GRQRF TIGPH
Sbjct: 26 KEAVRGFGVRRQRGTPVYVLKFRASGRQRFFTIGPH 61
>WP_076829842.1 integrase [Bradyrhizobium sp. UFLA 03-321] OMI05844.1 integrase
[Bradyrhizobium sp. UFLA 03-321]
Length = 406
Score = 83.6 bits (205), Expect = 5e-17
Identities = 52/88 (59%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = -2
Query: 253 WDADPRS---GAGLWCSAPTRPGDLRHQV-PRVRSAALRHDRPSRAPWTPELARREAKRL 86
WDAD R G G+ L+++V R R + P APWTPELARREAKRL
Sbjct: 21 WDADHREAVRGFGVRRQRDQATYVLKYRVFGRQRFVTIG---PHGAPWTPELARREAKRL 77
Query: 85 LGLVANGKDPADEKAKARLQATDTLSVI 2
LGLVA+GKDPADEKAKARLQA DTL VI
Sbjct: 78 LGLVADGKDPADEKAKARLQAADTLRVI 105
>WP_009030750.1 integrase [Bradyrhizobium sp. ORS 375] CCD95844.1 putative
phage-like integrase [Bradyrhizobium sp. ORS 375]
Length = 429
Score = 57.8 bits (138), Expect(2) = 9e-17
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -2
Query: 139 PSRAPWTPELARREAKRLLGLVANGKDPADEKAKARLQATDT 14
P +PWTPE AR+EAKRLLGLVA GKDPA E+ L+ DT
Sbjct: 60 PHGSPWTPEKARKEAKRLLGLVAQGKDPAAERELLTLRTADT 101
Score = 56.2 bits (134), Expect(2) = 9e-17
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
+EAVRGFGVRR+R Y++K+R GRQRF TIGPH
Sbjct: 26 KEAVRGFGVRRQRGTPVYILKFRASGRQRFFTIGPH 61
>WP_057741322.1 integrase [Bradyrhizobium manausense] KRQ17114.1 integrase
[Bradyrhizobium manausense]
Length = 406
Score = 82.8 bits (203), Expect = 9e-17
Identities = 51/88 (57%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = -2
Query: 253 WDADPRS---GAGLWCSAPTRPGDLRHQV-PRVRSAALRHDRPSRAPWTPELARREAKRL 86
WDAD R G G+ L+++V R R + P APWTPELAR+EAKRL
Sbjct: 21 WDADHREAVRGFGVRRQRDQATYVLKYRVFGRQRFVTIG---PHGAPWTPELARKEAKRL 77
Query: 85 LGLVANGKDPADEKAKARLQATDTLSVI 2
LGLVANGKDPADEKAK RLQA DTL VI
Sbjct: 78 LGLVANGKDPADEKAKTRLQAADTLRVI 105
>SFP95956.1 Site-specific recombinase XerD [Bradyrhizobium sp. Ghvi]
Length = 405
Score = 80.5 bits (197), Expect = 6e-16
Identities = 50/88 (56%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = -2
Query: 253 WDADPRS---GAGLWCSAPTRPGDLRHQV-PRVRSAALRHDRPSRAPWTPELARREAKRL 86
WDAD R G G+ L+++V R R + P +PWTPELAR+EAKRL
Sbjct: 21 WDADHREAVRGFGVRRQRDQATYVLKYRVFSRQRFVTIG---PHGSPWTPELARKEAKRL 77
Query: 85 LGLVANGKDPADEKAKARLQATDTLSVI 2
LGLVANGKDPA EKAKARLQA DTL VI
Sbjct: 78 LGLVANGKDPAAEKAKARLQAADTLRVI 105
>WP_057018951.1 integrase [Bradyrhizobium pachyrhizi] KRP90021.1 integrase
[Bradyrhizobium pachyrhizi]
Length = 428
Score = 53.9 bits (128), Expect(2) = 3e-13
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPHARRGHP 115
REA++GFGVRR++ A Y++KYR GRQRF T+G H P
Sbjct: 26 REALKGFGVRRQKSAAVYILKYRVHGRQRFYTLGTHGEHFPP 67
Score = 48.1 bits (113), Expect(2) = 3e-13
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = -2
Query: 118 PELARREAKRLLGLVANGKDPADEKAKARLQATDTLSVI 2
PE ARREAKRLLG VA GKDP EK AR +A +TL +
Sbjct: 67 PEKARREAKRLLGRVAEGKDPQTEKHIARDEAQNTLGAV 105
>WP_024879647.1 MULTISPECIES: hypothetical protein [Methylosinus] OAI30976.1
hypothetical protein A1351_06715 [Methylosinus sp.
R-45379]
Length = 426
Score = 48.1 bits (113), Expect(2) = 5e-11
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = -2
Query: 130 APWTPELARREAKRLLGLVANGKDPADEKAKARLQAT 20
APWTP+LAR EA+RLLG + +G DPA ++ + R AT
Sbjct: 59 APWTPDLARAEARRLLGEIVSGGDPAADRQEGRKAAT 95
Score = 46.2 bits (108), Expect(2) = 5e-11
Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = -3
Query: 240 REAVRGFGVRRRRDQATYVIKYRGF-GRQRFVTIGPH 133
R AV GFG RR++D+A+YV+KYR GRQR+ TIG H
Sbjct: 21 RGAVPGFGARRQKDRASYVLKYRTLDGRQRWHTIGRH 57
>WP_018045697.1 hypothetical protein [Methylobacterium sp. 88A]
Length = 385
Score = 54.7 bits (130), Expect(2) = 3e-10
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 130 APWTPELARREAKRLLGLVANGKDPADEKAKARLQAT 20
+PWT +LARREAKRLLGLVA G+DPA +KA AR T
Sbjct: 60 SPWTADLARREAKRLLGLVATGQDPATKKAVARTAPT 96
Score = 37.4 bits (85), Expect(2) = 3e-10
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -3
Query: 231 VRGFGVRRRRDQATYVIKYRGFGRQRFVTIGPH 133
++GF R +R YV+KYR GRQR+ TIG H
Sbjct: 26 LKGFAARCQRRDHVYVLKYRLDGRQRWFTIGKH 58
>WP_051881864.1 hypothetical protein [Parvularcula oceani]
Length = 394
Score = 51.6 bits (122), Expect(2) = 4e-10
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -2
Query: 130 APWTPELARREAKRLLGLVANGKDPADEKAKARLQAT 20
+PWTP+ AR+EA+ LL LVA GKDPA EK AR +AT
Sbjct: 50 SPWTPDTARKEAQALLALVAQGKDPATEKLAARDRAT 86
Score = 39.7 bits (91), Expect(2) = 4e-10
Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = -3
Query: 231 VRGFGVRRRRD-QATYVIKYRGFGRQRFVTIGPH 133
++GFGV+R + A+YV+K+R GRQR++TIG H
Sbjct: 15 LKGFGVQRTKGGTASYVLKFRAGGRQRWLTIGKH 48