BLASTX nr result

ID: Glycyrrhiza29_contig00026041 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00026041
         (275 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran...    63   1e-09
XP_013457497.1 hypothetical protein MTR_4g095720 [Medicago trunc...    54   1e-07
OMP01064.1 reverse transcriptase [Corchorus capsularis]                56   5e-07
KYP59936.1 Putative ribonuclease H protein At1g65750 family [Caj...    53   5e-07
OMO88470.1 reverse transcriptase [Corchorus capsularis]                55   6e-07
KYP35215.1 Putative ribonuclease H protein At1g65750 family, par...    54   1e-06
KYP30980.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    55   1e-06
XP_019462902.1 PREDICTED: uncharacterized protein LOC109361820 [...    52   3e-06
OMO83333.1 reverse transcriptase [Corchorus olitorius]                 52   7e-06
GAU34226.1 hypothetical protein TSUD_210080 [Trifolium subterran...    52   8e-06

>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
          Length = 1250

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 29/51 (56%), Positives = 36/51 (70%)
 Frame = -1

Query: 215  HVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDACNTFFPRGF 63
            H +REANQVAD LA   LSL  +C IFD +P FL++PL+ D+    FPRGF
Sbjct: 1200 HTWREANQVADALAKFSLSLSNNCIIFDHVPGFLVMPLMADSVGIGFPRGF 1250


>XP_013457497.1 hypothetical protein MTR_4g095720 [Medicago truncatula] KEH31528.1
           hypothetical protein MTR_4g095720 [Medicago truncatula]
          Length = 85

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = -1

Query: 218 SHVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDACNTFFPRGF 63
           SH+ REANQ+AD LA   LSLD S +IFD +PDF +  ++ D     FP+ F
Sbjct: 34  SHLLREANQIADSLAKFDLSLDNSIRIFDYVPDFSLNYVVADTLAVSFPQDF 85


>OMP01064.1 reverse transcriptase [Corchorus capsularis]
          Length = 789

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 30/67 (44%), Positives = 39/67 (58%)
 Frame = -1

Query: 269 IPYLIHKLMSDIECNHVSHVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDA 90
           I Y   KLM  I+   +SH FREANQ AD  AN G  LD S  +++ IPDF++  L+ + 
Sbjct: 716 IIYDCRKLMERIQNIKISHSFREANQAADAFANRGRMLDESFVVYNCIPDFVMNILIANT 775

Query: 89  CNTFFPR 69
               FPR
Sbjct: 776 MGISFPR 782


>KYP59936.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 116

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 28/59 (47%), Positives = 36/59 (61%)
 Frame = -1

Query: 239 DIECNHVSHVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDACNTFFPRGF 63
           D EC H+    REANQVAD LAN G SL  +  +F+ +  F+ L +L D  +T F RGF
Sbjct: 61  DFECRHI---LREANQVADGLANYGRSLTNNLHVFENVMPFISLVVLADVSSTIFLRGF 116


>OMO88470.1 reverse transcriptase [Corchorus capsularis]
          Length = 1768

 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 30/67 (44%), Positives = 36/67 (53%)
 Frame = -1

Query: 269  IPYLIHKLMSDIECNHVSHVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDA 90
            I Y    LM    C ++SH FRE N VAD LAN+G    MS  +FDVIP F+   L+ D 
Sbjct: 1698 IIYDCRMLMQRFPCLNLSHCFREGNMVADALANNGRVQQMSFSVFDVIPYFVFDLLMADT 1757

Query: 89   CNTFFPR 69
                 PR
Sbjct: 1758 AGISLPR 1764


>KYP35215.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan] KYP35220.1 Putative ribonuclease H protein
           At1g65750 family, partial [Cajanus cajan]
          Length = 170

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = -1

Query: 236 IECNHVSHVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDACNTFFPRGF 63
           ++CNH+   F EANQVAD LA  G+ +    +IF   P +++ PL  D+ N  FPRGF
Sbjct: 116 VDCNHI---FCEANQVADCLAKRGIDILDGIQIFSSPPPWVMAPLFADSSNVIFPRGF 170


>KYP30980.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 565

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 35/61 (57%)
 Frame = -1

Query: 245 MSDIECNHVSHVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDACNTFFPRG 66
           + ++EC   SH+ REANQVADR A  G SL     +F   P ++ LPL  D     FPRG
Sbjct: 508 IQNLEC---SHILREANQVADRFAKHGFSLSEGVSVFTQPPGWVNLPLFADKSAVTFPRG 564

Query: 65  F 63
           F
Sbjct: 565 F 565


>XP_019462902.1 PREDICTED: uncharacterized protein LOC109361820 [Lupinus
           angustifolius]
          Length = 158

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = -1

Query: 215 HVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDACNTFFPRG 66
           H+F+E N VAD LA   LSL++  ++FDVI DF +LP   D   T + RG
Sbjct: 108 HIFQEGNSVADALAKHDLSLNLRFRLFDVISDFCVLPFTFDVAFTVYRRG 157


>OMO83333.1 reverse transcriptase [Corchorus olitorius]
          Length = 408

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 24/60 (40%), Positives = 38/60 (63%)
 Frame = -1

Query: 248 LMSDIECNHVSHVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLGDACNTFFPR 69
           LM+ +    ++H  RE NQVAD+LA +  SL+ +  I++ +P+F+   LL D   T+FPR
Sbjct: 302 LMNQLGILRLNHTLREGNQVADQLAKAATSLEQNFYIYNAVPNFISNLLLADLMGTYFPR 361


>GAU34226.1 hypothetical protein TSUD_210080 [Trifolium subterraneum]
          Length = 964

 Score = 52.4 bits (124), Expect = 8e-06
 Identities = 25/71 (35%), Positives = 37/71 (52%)
 Frame = -1

Query: 275  FTIPYLIHKLMSDIECNHVSHVFREANQVADRLANSGLSLDMSCKIFDVIPDFLILPLLG 96
            + + +  H L    E    +H+ REANQVAD+LA   LS  +   +F  +PD + +  + 
Sbjct: 894  YQLVHSTHLLAESFEIVEWNHILREANQVADKLARHSLSSIVDFNVFTYVPDLISVHFMA 953

Query: 95   DACNTFFPRGF 63
            D     FPRGF
Sbjct: 954  DLACIVFPRGF 964


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