BLASTX nr result
ID: Glycyrrhiza29_contig00024833
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00024833
(221 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004514624.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 122 2e-33
GAU39304.1 hypothetical protein TSUD_119090 [Trifolium subterran... 122 2e-33
XP_004516253.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 118 9e-32
ABD28306.1 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-... 117 3e-31
XP_012567540.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 111 7e-30
KYP62807.1 DNA-directed RNA polymerases I, II, and III subunit R... 99 2e-24
XP_003539245.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 97 2e-23
KRH30040.1 hypothetical protein GLYMA_11G154500 [Glycine max] 97 3e-23
KHN15236.1 DNA-directed RNA polymerases I, II, and III subunit R... 86 2e-19
XP_007148970.1 hypothetical protein PHAVU_005G029700g [Phaseolus... 86 4e-19
XP_006579231.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 84 9e-19
XP_019427747.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 85 1e-18
XP_017425234.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 85 1e-18
XP_007221129.1 hypothetical protein PRUPE_ppa018371mg, partial [... 85 1e-18
ONI20758.1 hypothetical protein PRUPE_2G032100 [Prunus persica] 85 2e-18
KRH62911.1 hypothetical protein GLYMA_04G141500 [Glycine max] 83 2e-18
KNA17634.1 hypothetical protein SOVF_076010 [Spinacia oleracea] 83 7e-18
XP_014499453.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 82 1e-17
XP_010999617.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 82 3e-17
XP_007011114.2 PREDICTED: DNA-directed RNA polymerases IV and V ... 80 7e-17
>XP_004514624.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Cicer
arietinum]
Length = 219
Score = 122 bits (307), Expect = 2e-33
Identities = 61/72 (84%), Positives = 67/72 (93%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYK 38
SNPS KVQVVFTGTEDI+K T+T IY QIVDKERLSRLILIVQS MTA+AR+ELENCPYK
Sbjct: 76 SNPSNKVQVVFTGTEDIRKKTMTDIYGQIVDKERLSRLILIVQSNMTAFARRELENCPYK 135
Query: 37 VEIIKMNDLLVN 2
VEIIK+NDL+VN
Sbjct: 136 VEIIKLNDLVVN 147
>GAU39304.1 hypothetical protein TSUD_119090 [Trifolium subterraneum]
Length = 223
Score = 122 bits (307), Expect = 2e-33
Identities = 59/73 (80%), Positives = 67/73 (91%)
Frame = -2
Query: 220 RSNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPY 41
RSNPS K+QVVF GT+DI+K T+T IY+QIVDKERLSRLIL+VQSKMTAYARKE ENCPY
Sbjct: 79 RSNPSNKIQVVFAGTDDIRKRTLTEIYSQIVDKERLSRLILVVQSKMTAYARKEFENCPY 138
Query: 40 KVEIIKMNDLLVN 2
KVEII +NDL+VN
Sbjct: 139 KVEIINLNDLVVN 151
>XP_004516253.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like isoform X1
[Cicer arietinum]
Length = 219
Score = 118 bits (296), Expect = 9e-32
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYK 38
SNPS KVQVVFTGTE I+K T+T IY+QIVDKERLSRLILIVQS MTA+ARKELE CPYK
Sbjct: 76 SNPSNKVQVVFTGTEYIRKKTMTDIYSQIVDKERLSRLILIVQSNMTAFARKELEKCPYK 135
Query: 37 VEIIKMNDLLVN 2
VEIIK+NDL+VN
Sbjct: 136 VEIIKLNDLVVN 147
>ABD28306.1 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal
[Medicago truncatula]
Length = 224
Score = 117 bits (293), Expect = 3e-31
Identities = 57/73 (78%), Positives = 67/73 (91%)
Frame = -2
Query: 220 RSNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPY 41
RSNPSIKVQVVF GT+DI+K + I +QIVDKERLSRLIL++QSKMT+YARKELENCP+
Sbjct: 80 RSNPSIKVQVVFPGTDDIRKSNLIVIQSQIVDKERLSRLILVMQSKMTSYARKELENCPF 139
Query: 40 KVEIIKMNDLLVN 2
KVEII++NDLLVN
Sbjct: 140 KVEIIQLNDLLVN 152
>XP_012567540.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B-like
isoform X2 [Cicer arietinum]
Length = 147
Score = 111 bits (278), Expect = 7e-30
Identities = 56/67 (83%), Positives = 62/67 (92%)
Frame = -2
Query: 202 KVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYKVEIIK 23
KVQVVFTGTE I+K T+T IY+QIVDKERLSRLILIVQS MTA+ARKELE CPYKVEIIK
Sbjct: 9 KVQVVFTGTEYIRKKTMTDIYSQIVDKERLSRLILIVQSNMTAFARKELEKCPYKVEIIK 68
Query: 22 MNDLLVN 2
+NDL+VN
Sbjct: 69 LNDLVVN 75
>KYP62807.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Cajanus
cajan]
Length = 213
Score = 99.4 bits (246), Expect = 2e-24
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYK 38
S+PS VQVVFTG++ I+KGT++ I+N IVD+E L LILIVQSKMT++ARK+LE CP+K
Sbjct: 70 SHPSNMVQVVFTGSDHIRKGTVSEIFNLIVDRENLKALILIVQSKMTSFARKDLETCPFK 129
Query: 37 VEIIKMNDLLVN 2
VEI ++ DLLVN
Sbjct: 130 VEIFRITDLLVN 141
>XP_003539245.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Glycine max]
XP_006591190.1 PREDICTED: DNA-directed RNA polymerase V
subunit 5C [Glycine max] KHN21306.1 DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Glycine soja]
KRH30041.1 hypothetical protein GLYMA_11G154500 [Glycine
max]
Length = 214
Score = 97.1 bits (240), Expect = 2e-23
Identities = 47/72 (65%), Positives = 60/72 (83%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYK 38
SNPS VQVVF GT+DI+KGT+ I QI DK RL LIL+VQSKMT++A+K+LE+ P+K
Sbjct: 71 SNPSNTVQVVFAGTDDIRKGTVNEICTQIADKGRLKGLILVVQSKMTSFAKKDLESLPFK 130
Query: 37 VEIIKMNDLLVN 2
VEII+++DLLVN
Sbjct: 131 VEIIRIDDLLVN 142
>KRH30040.1 hypothetical protein GLYMA_11G154500 [Glycine max]
Length = 236
Score = 97.1 bits (240), Expect = 3e-23
Identities = 47/72 (65%), Positives = 60/72 (83%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYK 38
SNPS VQVVF GT+DI+KGT+ I QI DK RL LIL+VQSKMT++A+K+LE+ P+K
Sbjct: 93 SNPSNTVQVVFAGTDDIRKGTVNEICTQIADKGRLKGLILVVQSKMTSFAKKDLESLPFK 152
Query: 37 VEIIKMNDLLVN 2
VEII+++DLLVN
Sbjct: 153 VEIIRIDDLLVN 164
>KHN15236.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Glycine
soja]
Length = 183
Score = 86.3 bits (212), Expect = 2e-19
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = -2
Query: 199 VQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYKVEIIKM 20
VQVVF G ++I+KGT+ I +QIVDK L LIL+VQSKMT++A+K+LEN P+KVE IK+
Sbjct: 46 VQVVFVGPKEIRKGTVNEICSQIVDKGSLKWLILVVQSKMTSFAKKDLENFPFKVETIKI 105
Query: 19 NDLLVN 2
+DLLVN
Sbjct: 106 DDLLVN 111
>XP_007148970.1 hypothetical protein PHAVU_005G029700g [Phaseolus vulgaris]
ESW20964.1 hypothetical protein PHAVU_005G029700g
[Phaseolus vulgaris]
Length = 213
Score = 85.9 bits (211), Expect = 4e-19
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYK 38
SN S VQVVF GT+ IKKGT+ +I ++IVD L LI+I+QSK+T++A+K+L N PYK
Sbjct: 70 SNLSNTVQVVFAGTDAIKKGTVMAICSRIVDSGNLKSLIIILQSKITSFAQKQLSNLPYK 129
Query: 37 VEIIKMNDLLVN 2
VEII++ DLLVN
Sbjct: 130 VEIIRIEDLLVN 141
>XP_006579231.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Glycine
max]
Length = 153
Score = 83.6 bits (205), Expect = 9e-19
Identities = 40/67 (59%), Positives = 55/67 (82%)
Frame = -2
Query: 202 KVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYKVEIIK 23
+VQVVF G ++I+KGT+ I +QI DK L LIL+V+SKMT++A+K+LEN P+KVE IK
Sbjct: 15 QVQVVFVGPKEIRKGTVNEICSQIADKGSLKWLILVVKSKMTSFAKKDLENFPFKVETIK 74
Query: 22 MNDLLVN 2
++DLLVN
Sbjct: 75 IDDLLVN 81
>XP_019427747.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Lupinus
angustifolius] OIW16898.1 hypothetical protein
TanjilG_01763 [Lupinus angustifolius]
Length = 223
Score = 85.1 bits (209), Expect = 1e-18
Identities = 46/73 (63%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDI-KKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPY 41
S+PS KV V F GT DI +K TI +++ I +KERL+RLILIVQSKMTAYA+K L+ P+
Sbjct: 79 SDPSNKVLVCFMGTTDIIRKETIRALHIDIAEKERLNRLILIVQSKMTAYAQKYLDASPF 138
Query: 40 KVEIIKMNDLLVN 2
KVEI+ +NDLLVN
Sbjct: 139 KVEILNINDLLVN 151
>XP_017425234.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Vigna
angularis] XP_017425235.1 PREDICTED: DNA-directed RNA
polymerase V subunit 5C-like [Vigna angularis]
KOM42401.1 hypothetical protein LR48_Vigan05g000500
[Vigna angularis] BAT93406.1 hypothetical protein
VIGAN_07235900 [Vigna angularis var. angularis]
Length = 213
Score = 84.7 bits (208), Expect = 1e-18
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYK 38
SNPS VQV F GT+ IK GT+ I ++IVD L LI+IVQSK+T++A+K+L N PYK
Sbjct: 70 SNPSNTVQVAFAGTDAIKVGTVMEICSRIVDSGNLKSLIIIVQSKITSFAQKKLMNLPYK 129
Query: 37 VEIIKMNDLLVN 2
VEII++ DLL+N
Sbjct: 130 VEIIRIEDLLIN 141
>XP_007221129.1 hypothetical protein PRUPE_ppa018371mg, partial [Prunus persica]
Length = 214
Score = 84.7 bits (208), Expect = 1e-18
Identities = 42/73 (57%), Positives = 55/73 (75%)
Frame = -2
Query: 220 RSNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPY 41
RSNPS K+ V+F GTE+I+K T+ IY + +KE + RLIL++QSKM +YARKELE P+
Sbjct: 70 RSNPSKKIVVIFCGTEEIRKQTMCGIYAGLPNKENIHRLILVLQSKMNSYARKELEMYPF 129
Query: 40 KVEIIKMNDLLVN 2
KVE + DLLVN
Sbjct: 130 KVETFHICDLLVN 142
>ONI20758.1 hypothetical protein PRUPE_2G032100 [Prunus persica]
Length = 230
Score = 84.7 bits (208), Expect = 2e-18
Identities = 42/73 (57%), Positives = 55/73 (75%)
Frame = -2
Query: 220 RSNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPY 41
RSNPS K+ V+F GTE+I+K T+ IY + +KE + RLIL++QSKM +YARKELE P+
Sbjct: 86 RSNPSKKIVVIFCGTEEIRKQTMCGIYAGLPNKENIHRLILVLQSKMNSYARKELEMYPF 145
Query: 40 KVEIIKMNDLLVN 2
KVE + DLLVN
Sbjct: 146 KVETFHICDLLVN 158
>KRH62911.1 hypothetical protein GLYMA_04G141500 [Glycine max]
Length = 183
Score = 83.2 bits (204), Expect = 2e-18
Identities = 40/66 (60%), Positives = 54/66 (81%)
Frame = -2
Query: 199 VQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYKVEIIKM 20
VQVVF G ++I+KGT+ I +QI DK L LIL+V+SKMT++A+K+LEN P+KVE IK+
Sbjct: 46 VQVVFVGPKEIRKGTVNEICSQIADKGSLKWLILVVKSKMTSFAKKDLENFPFKVETIKI 105
Query: 19 NDLLVN 2
+DLLVN
Sbjct: 106 DDLLVN 111
>KNA17634.1 hypothetical protein SOVF_076010 [Spinacia oleracea]
Length = 219
Score = 82.8 bits (203), Expect = 7e-18
Identities = 36/73 (49%), Positives = 58/73 (79%)
Frame = -2
Query: 220 RSNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPY 41
R+NPS K+ V+F GTE+IKKG I +I++QI++K+ L R+IL++Q+KM +ARK +++ P
Sbjct: 75 RANPSTKILVIFGGTEEIKKGNILTIFSQIINKDSLHRIILVLQNKMNHHARKVVDDYPV 134
Query: 40 KVEIIKMNDLLVN 2
K EI ++ DL++N
Sbjct: 135 KTEIFQITDLMIN 147
>XP_014499453.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Vigna radiata
var. radiata]
Length = 213
Score = 82.0 bits (201), Expect = 1e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = -2
Query: 217 SNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPYK 38
SNPS VQV F GT+ IK GT+ I ++IVD L LI+IVQSK+T++A+K+L N YK
Sbjct: 70 SNPSNTVQVAFAGTDAIKMGTVMEICSRIVDSGNLKSLIIIVQSKITSFAQKKLMNLAYK 129
Query: 37 VEIIKMNDLLVN 2
VEII++ DLL+N
Sbjct: 130 VEIIRIEDLLIN 141
>XP_010999617.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Populus
euphratica]
Length = 233
Score = 81.6 bits (200), Expect = 3e-17
Identities = 40/73 (54%), Positives = 54/73 (73%)
Frame = -2
Query: 220 RSNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPY 41
RSNP K V+F GT++IK I ++Y QI++KE L LILI+QSKM +A+KELE P+
Sbjct: 89 RSNPHKKTLVMFLGTDEIKTANIRTVYGQILNKECLHGLILILQSKMNHFAKKELEKFPF 148
Query: 40 KVEIIKMNDLLVN 2
KVE+ ++ DLLVN
Sbjct: 149 KVEVFQITDLLVN 161
>XP_007011114.2 PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B
[Theobroma cacao]
Length = 235
Score = 80.5 bits (197), Expect = 7e-17
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = -2
Query: 220 RSNPSIKVQVVFTGTEDIKKGTITSIYNQIVDKERLSRLILIVQSKMTAYARKELENCPY 41
RSNPS K+ VVF GT DI+K T+ ++ QI++ E LS LILI+QSKM ++A KEL+N P+
Sbjct: 92 RSNPSKKILVVFMGTNDIRKATVCALKGQILN-ESLSGLILILQSKMNSFALKELKNFPF 150
Query: 40 KVEIIKMNDLLVN 2
KVE+ K+ DL VN
Sbjct: 151 KVELFKIADLYVN 163