BLASTX nr result

ID: Glycyrrhiza29_contig00024331 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00024331
         (306 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU48882.1 hypothetical protein TSUD_406610 [Trifolium subterran...    70   5e-12
GAU39162.1 hypothetical protein TSUD_147840 [Trifolium subterran...    55   1e-06

>GAU48882.1 hypothetical protein TSUD_406610 [Trifolium subterraneum]
          Length = 725

 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = -2

Query: 185 MIPTFDKKE-AYWWLIKVDQYFEAIG-MPEEMKLSWAAAMALRGDALKWWFYRKESNQNV 12
           ++P FD +E  YWWLI++D+YF A   + E+MK+ W    ALRGDA  WW   K+ NQNV
Sbjct: 5   VVPIFDGREDGYWWLIQLDRYFLANSWILEKMKVDWVTLFALRGDAYMWWSSWKQGNQNV 64

Query: 11  TW 6
           TW
Sbjct: 65  TW 66


>GAU39162.1 hypothetical protein TSUD_147840 [Trifolium subterraneum]
          Length = 322

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -2

Query: 182 IPTFDKKE-AYWWLIKVDQYFEAIGMPEEMKLSWAAAMALRGDALKWWFYRKESNQNVTW 6
           IP F++++ AYWW++ +D+YF  +  PEE K++   A A+RG+A+ WWF        V W
Sbjct: 7   IPVFNEEDDAYWWVLCMDKYFGGMNTPEEKKMT-VVAKAIRGNAILWWFCWIHRYPKVNW 65


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