BLASTX nr result

ID: Glycyrrhiza29_contig00024151 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00024151
         (427 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterran...    70   2e-11
GAU14292.1 hypothetical protein TSUD_308520 [Trifolium subterran...    62   8e-09
KYP57109.1 Putative ribonuclease H protein At1g65750 family [Caj...    59   2e-07
GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium ...    56   1e-06
GAU48967.1 hypothetical protein TSUD_188140 [Trifolium subterran...    57   1e-06
GAU47359.1 hypothetical protein TSUD_403620 [Trifolium subterran...    56   1e-06
XP_003629364.1 hypothetical protein MTR_8g076330 [Medicago trunc...    55   2e-06
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran...    55   4e-06

>GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterraneum]
          Length = 1147

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
 Frame = -3

Query: 425  KTVLCRRGVLSSSVCSLCQGEEKTIPHCLFGYAIAKRVWQACGFQGLDLTASTSSLHQWL 246
            K +L RR V +S++C  C    +TI HCLF    A  +W+ACG + +   ++   L  W 
Sbjct: 853  KYILNRRRVCASNICPRCTAMPETIVHCLFACTDAIGIWRACGLEHVLPPSTDVDLFCWC 912

Query: 245  HDLVVQEGTSCLVILWVIWCA*NLHIF*GTVVVPAELFSKVYPLTHHIHHAFWDMVALAH 66
             D+    G    +I+W +WC+ N  IF     +   L +KV+ +      AF +  + + 
Sbjct: 913  RDVGKSHGCIIFIIMWFVWCSRNDAIFNNNKAIVHNLVAKVHYMLSFCTAAFENTTSGSG 972

Query: 65   PPCE---VSWIWAGEDVFVLNVD 6
               E   V W    E    LNVD
Sbjct: 973  GNSEHRLVVWPRPDEGTVCLNVD 995


>GAU14292.1 hypothetical protein TSUD_308520 [Trifolium subterraneum]
          Length = 292

 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 27/87 (31%), Positives = 44/87 (50%)
 Frame = -3

Query: 425 KTVLCRRGVLSSSVCSLCQGEEKTIPHCLFGYAIAKRVWQACGFQGLDLTASTSSLHQWL 246
           + VL  R +  S++C  C    +TI HCLF    A  VW+ACG + +  +    +L  W 
Sbjct: 112 REVLHHRWICVSNICPRCSTMVETIEHCLFWCVEAVCVWKACGLERVLPSLQVGNLFSWC 171

Query: 245 HDLVVQEGTSCLVILWVIWCA*NLHIF 165
            ++    G    +++W +WCA N  +F
Sbjct: 172 REVCSSHGNIVFIVMWFVWCARNDFLF 198


>KYP57109.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 365

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 29/97 (29%), Positives = 50/97 (51%)
 Frame = -3

Query: 425 KTVLCRRGVLSSSVCSLCQGEEKTIPHCLFGYAIAKRVWQACGFQGLDLTASTSSLHQWL 246
           +  L  RG++ +S C +C  +++T+ HCL        +W + G     L   +  + +WL
Sbjct: 69  RETLVHRGIIDNSNCPMCNAQQETLLHCLLECPRIGALWNSLGLCQPHLPTDSEKIKEWL 128

Query: 245 HDLVVQEGTSCLVILWVIWCA*NLHIF*GTVVVPAEL 135
              V ++G+   V+LWVIW + N  IF G +   A+L
Sbjct: 129 KCWVEEQGSIIPVLLWVIWRSRNNMIFKGKLDKVADL 165


>GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
          Length = 284

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
 Frame = -3

Query: 395 SSSVCSLCQGEEKTIPHCLFGYAIAKRVWQACGFQGLDLTASTSSLHQWL-HDLVVQEGT 219
           SS +C+ C   E+TI HCL    I++R+W + GFQ      S S L  WL ++ +     
Sbjct: 3   SSDICTRCSSGEETILHCLRDCPISRRIWNSLGFQNSSF-FSCSDLELWLRNNSIGLNAP 61

Query: 218 SCLVILWVIWCA*NLHIF*GTVVVPAELFSKVYPLTHHIHHAFWDMVALAHPPCEVSWIW 39
           + L  LW  W A N+       +   ++ ++V  L   I   F   V    P   +SW  
Sbjct: 62  TFLAGLWWNWRARNIFCVGNASIHSFKVVAEVSKLVALIVFCFPARVHTDTPRRWISWHP 121

Query: 38  AGEDVFVLNVD 6
              D  VLNVD
Sbjct: 122 CKTDCVVLNVD 132


>GAU48967.1 hypothetical protein TSUD_188140 [Trifolium subterraneum]
          Length = 621

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
 Frame = -3

Query: 425 KTVLCRRGVLSSSVCSLCQGEEKTIPHCLFGYAIAKRVWQACGFQGLDLTASTSSLHQWL 246
           K VL  R V  S++C  C  + +TI HCLF    +  +W  CG   +  +        W 
Sbjct: 451 KDVLHHRQVCISNLCPRCLLDTETIDHCLFLCGDSVDIWNMCGLHSIPSSIQGVDRMTWC 510

Query: 245 HDLVVQEGTSCLVILWVIWCA*NLHIF*GTVVVPAELFSKVYPLTHHIHHAFW--DMVA- 75
                + G   LV LW+ WCA N  IF           +K + L +    AF   ++V+ 
Sbjct: 511 KQFGRKHGNIILVTLWMAWCARNNFIFNNQRECTQTSVAKFFSLVNASADAFLLPEVVSP 570

Query: 74  LAHPPCEVSWIWAGEDVFVLNVD 6
           LA     V+W    E    LNVD
Sbjct: 571 LAGNHRLVTWSRPVEGFVCLNVD 593


>GAU47359.1 hypothetical protein TSUD_403620 [Trifolium subterraneum]
          Length = 330

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 3/143 (2%)
 Frame = -3

Query: 425 KTVLCRRGVLSSSVCSLCQGEEKTIPHCLFGYAIAKRVWQACGFQGLDLTASTSSLHQWL 246
           + VL  R V ++ +C  C    ++I HCLF    A  VW+A G   +  ++       W 
Sbjct: 60  RAVLHHRHVCTTDICPRCAIASESIEHCLFTCNDAASVWRAYGLHVIPNSSHGVDNFTWY 119

Query: 245 HDLVVQEGTSCLVILWVIWCA*NLHIF*GTVVVPAELFSKVYPLTHHIHHAFWDMVALA- 69
               ++ G    +I+WVIWCA N  IF            K+  L      AF     +A 
Sbjct: 120 KKQGMKHGRIFFIIMWVIWCARNEFIFDNHRQSVVTSVIKIDSLQQACAAAFGSTQTIAT 179

Query: 68  --HPPCEVSWIWAGEDVFVLNVD 6
               P  V+W    E    LNVD
Sbjct: 180 QSSNPRLVTWARPMEGTICLNVD 202


>XP_003629364.1 hypothetical protein MTR_8g076330 [Medicago truncatula] AET03840.1
           hypothetical protein MTR_8g076330 [Medicago truncatula]
          Length = 220

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
 Frame = -3

Query: 425 KTVLCRRGVLSSSVCSLCQGEEKTIPHCLFGYAIAKRVWQACGF---QGLDLTASTSSLH 255
           K VL  RGV  S++C  C  ++++IPHCL     A  VW  C F     L +   +S++ 
Sbjct: 27  KYVLHHRGVNVSAICPCCNRKDESIPHCLILCPRAVAVWSGCEFPNVSSLCINNPSSNMR 86

Query: 254 QWLHDLVVQEGTSCLVILWVIWCA*NLHIF*GTVVVPAELFSKVY 120
             +  L+ + G+   +I+W + C  N  +F G  ++     S VY
Sbjct: 87  DIIQMLLSKIGSVAPIIMWNLSCTRNKLVFDGIQLIVRTAVSAVY 131


>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
 Frame = -3

Query: 425 KTVLCRRGVLSSSVCSLCQGEEKTIPHCLFGYAIAKRVWQACGFQGLDLTASTSSLHQWL 246
           K++L  RG+L +++C  C  EE++  HCL      KR W+A GF G        +L+ WL
Sbjct: 256 KSMLSHRGLLQANLCPRCNIEEESTLHCLRNCEFIKRFWKAIGFLGQTFFQG-DNLNDWL 314

Query: 245 HDLVVQEGTSCLVIL---WVIWCA*N 177
            + +  +G S  + +   W IWCA N
Sbjct: 315 RNSI--DGPSSFLFMAAVWWIWCARN 338


Top