BLASTX nr result
ID: Glycyrrhiza29_contig00023455
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00023455
(906 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP51324.1 Putative ribonuclease H protein At1g65750 family, par... 200 3e-57
KYP74203.1 Putative ribonuclease H protein At1g65750 family [Caj... 181 6e-49
KYP35629.1 Putative ribonuclease H protein At1g65750 family [Caj... 181 1e-47
KYP32375.1 Putative ribonuclease H protein At1g65750 family [Caj... 164 3e-44
KYP48192.1 Putative ribonuclease H protein At1g65750 family [Caj... 160 3e-43
XP_019457635.1 PREDICTED: uncharacterized protein LOC109358024 [... 167 6e-43
KYP70337.1 Putative ribonuclease H protein At1g65750 family, par... 155 7e-42
KYP62772.1 Putative ribonuclease H protein At1g65750 family [Caj... 160 1e-40
GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterran... 152 2e-39
KYP50116.1 Putative ribonuclease H protein At1g65750 family [Caj... 153 3e-39
GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium ... 144 1e-37
KYP75107.1 Putative ribonuclease H protein At1g65750 family [Caj... 150 4e-37
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ... 148 3e-36
KYP66844.1 Putative ribonuclease H protein At1g65750 family [Caj... 140 4e-36
KYP33511.1 Putative ribonuclease H protein At1g65750 family [Caj... 140 4e-36
KYP39425.1 Putative ribonuclease H protein At1g65750 family, par... 143 8e-36
GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterran... 144 6e-35
OMO81305.1 reverse transcriptase [Corchorus capsularis] 144 6e-35
KYP43651.1 Putative ribonuclease H protein At1g65750 family [Caj... 140 2e-34
KYP64705.1 Putative ribonuclease H protein At1g65750 family, par... 136 3e-34
>KYP51324.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 483
Score = 200 bits (509), Expect = 3e-57
Identities = 109/299 (36%), Positives = 158/299 (52%)
Frame = +2
Query: 5 IWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPT 184
+WL +LPTN LR + +A S C C + ++DILH LRDC H+RE W R G P
Sbjct: 188 LWLAFRTALPTNQLRFQRHLAASASCPCCLTRDKDILHCLRDCHHAREVWKRLGFSTLPA 247
Query: 185 FFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDF 364
F + + W++ I GD+ LF + W+W WRN + E W V + + D
Sbjct: 248 FNATNV-VSWIESMIYGDHSTLFSVAAWWIWKWRNNYIFEQEIWSISQVLNWIRALELDC 306
Query: 365 AQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILGF 544
A R++ KW PL +KLN+D SC M TGGL+R+ +G+W+ F
Sbjct: 307 A-----REVAIYGTHSKPKWSPPLAPFLKLNIDGSC-SRNGQMGTGGLVRNQQGEWLTVF 360
Query: 545 STKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYAGLL 724
S+ +G GD LAELLA++NGL W G R + CE +A+ V++++ D++FH +A ++
Sbjct: 361 SSNEGQGDAPLAELLALRNGLEVAWGCGYREIKCECDALDVVNVVMGLLDLNFHPHARVV 420
Query: 725 QEIIQFDNNDWRLEFKHVMREANMCADYLAKDVHHLQSRGKRWKEPTIQLESLLLHDCL 901
+I N W HV REAN AD LAK H + W P I +++ + HD L
Sbjct: 421 LQIRMLMNRAWSCHLAHVPREANSSADILAKFGAHQGGKWHFWYTPPIMVKNSVEHDAL 479
>KYP74203.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 611
Score = 181 bits (459), Expect = 6e-49
Identities = 91/272 (33%), Positives = 147/272 (54%)
Frame = +2
Query: 2 LIWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTP 181
+IWL+ H ++PTN R G+A SP C RC + E +LH +RDC +S+ W + G +
Sbjct: 308 IIWLMLHVAVPTNLFRFNRGLALSPLCVRCGEDTESVLHCMRDCKYSKALWLQFGF--SN 365
Query: 182 TFFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYD 361
F H+ W++ + FLA + W W WRN VL E+W+ V ++ + D
Sbjct: 366 INFFNHEVRTWIQRGVNSAQCSKFLAVMWWTWRWRNMDVLGGEEWNMEQVRYKINSTLCD 425
Query: 362 FAQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILG 541
+ ++ + + + W +P P ++K+NVD S + GG++R +G W G
Sbjct: 426 WNNAFAGEQV-HSHEVQEVTWCKPTPPMVKVNVDGSYKSGDLCVGFGGVIRDHEGTWKTG 484
Query: 542 FSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYAGL 721
FS + T LLAELL +K+GL+ WD G R V CE+++++ L++ FH + +
Sbjct: 485 FSGRHQTTSVLLAELLGLKHGLLLAWDAGFREVQCETDSLEAFRLVSMAHVPKFHNFGVV 544
Query: 722 LQEIIQFDNNDWRLEFKHVMREANMCADYLAK 817
+Q+I + DWR+ H++R+ N CAD LAK
Sbjct: 545 IQQIRELLRRDWRVALSHILRQGNACADILAK 576
>KYP35629.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1411
Score = 181 bits (459), Expect = 1e-47
Identities = 91/272 (33%), Positives = 147/272 (54%)
Frame = +2
Query: 2 LIWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTP 181
+IWL+ H ++PTN R G+A SP C RC + E +LH +RDC +S+ W + G +
Sbjct: 1108 IIWLMLHVAVPTNLFRFNRGLALSPLCVRCGEDTESVLHCMRDCKYSKALWLQFGF--SN 1165
Query: 182 TFFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYD 361
F H+ W++ + FLA + W W WRN VL E+W+ V ++ + D
Sbjct: 1166 INFFNHEVRTWIQRGVNSAQCSKFLAVMWWTWRWRNMDVLGGEEWNMEQVRYKINSTLCD 1225
Query: 362 FAQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILG 541
+ ++ + + + W +P P ++K+NVD S + GG++R +G W G
Sbjct: 1226 WNNAFAGEQV-HSHEVQEVTWCKPTPPMVKVNVDGSYKSGDLCVGFGGVIRDHEGTWKTG 1284
Query: 542 FSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYAGL 721
FS + T LLAELL +K+GL+ WD G R V CE+++++ L++ FH + +
Sbjct: 1285 FSGRHQTTSVLLAELLGLKHGLLLAWDAGFREVQCETDSLEAFRLVSMAHVPKFHNFGVV 1344
Query: 722 LQEIIQFDNNDWRLEFKHVMREANMCADYLAK 817
+Q+I + DWR+ H++R+ N CAD LAK
Sbjct: 1345 IQQIRELLRRDWRVALSHILRQGNACADILAK 1376
>KYP32375.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 376
Score = 164 bits (414), Expect = 3e-44
Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 4/302 (1%)
Frame = +2
Query: 8 WLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPTF 187
W I + +LPTN R ++TS C RCS ++E ILHVLRDCPH+RE W R G+ P
Sbjct: 77 WQILNNALPTNSKRKDCHLSTSDTCPRCSGSSETILHVLRDCPHAREIWSRMGISSGP-L 135
Query: 188 FTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLR--DEDWDALHVASRMVHSTYD 361
+ I W + I + + + W W WRN ++ ++W+ +V R ++++
Sbjct: 136 LSPDNIISWFRNVINSKDSPKIITVLWWAWKWRNNSIFAAGKDEWNINNVI-RGIYNSLA 194
Query: 362 FAQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILG 541
+LN + + H W P +KLNVD S + M GG++R G W+ G
Sbjct: 195 ELPYLNKMLQHEFN---HSPWTPPKNQFLKLNVDGSFNVSNGRMSIGGVVRDCAGRWLYG 251
Query: 542 FSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLL-TSGGDISF-HMYA 715
FS G GD +LAELLA+K GL W++G + ++CES+ ++V +L D S H +
Sbjct: 252 FSKTAGKGDHILAELLAIKTGLSRCWEKGWKHIICESDCLEVTKVLPLEKEDHSHRHKHC 311
Query: 716 GLLQEIIQFDNNDWRLEFKHVMREANMCADYLAKDVHHLQSRGKRWKEPTIQLESLLLHD 895
G +++I W H+ R+AN AD LA + W P + LL+ D
Sbjct: 312 GTIEDIRILLRKSWFTTIVHINRDANKVADRLASWNTTKVDWDENWDIPPNNVLDLLMLD 371
Query: 896 CL 901
L
Sbjct: 372 NL 373
>KYP48192.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 356
Score = 160 bits (406), Expect = 3e-43
Identities = 91/278 (32%), Positives = 134/278 (48%), Gaps = 6/278 (2%)
Frame = +2
Query: 2 LIWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTP 181
L+WL+ H++LPTN R+R + SP C RCS N E ILH +RDCPHSRE W R + +
Sbjct: 82 LLWLLVHQALPTNVFRNRCNLQDSPYCSRCSGNIETILHCIRDCPHSRELWTRLDLAQSN 141
Query: 182 TFFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRM------ 343
F P+ W+ + + +++ L + +I W W WRN +L W +V +
Sbjct: 142 DFHIL-DPVAWIFKQLSAEDKELRMLTIWWAWRWRNNMILDSSCWSVNYVVRCIYLDALN 200
Query: 344 VHSTYDFAQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDK 523
+H + L P S +H LNVD + + GGL+R+
Sbjct: 201 LHLSLSSDFQLTPTLFPLDSSTVH------------LNVDGCWFSDQSRLGFGGLIRNVS 248
Query: 524 GDWILGFSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISF 703
G W+ GFS+ GDP LAELLA+ GL W G + V C +++ ++ L
Sbjct: 249 GHWLAGFSSNCSHGDPSLAELLAILEGLKIAWHMGFKTVQCMIDSMDIVQSLLHRDQAYL 308
Query: 704 HMYAGLLQEIIQFDNNDWRLEFKHVMREANMCADYLAK 817
H +A L +I + W + F + R+ N AD LAK
Sbjct: 309 HSHASYLFDIFSLVDKPWTVNFLWIARDRNCSADALAK 346
>XP_019457635.1 PREDICTED: uncharacterized protein LOC109358024 [Lupinus
angustifolius]
Length = 1188
Score = 167 bits (423), Expect = 6e-43
Identities = 103/300 (34%), Positives = 150/300 (50%), Gaps = 2/300 (0%)
Frame = +2
Query: 2 LIWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTP 181
L WL HE+LP+NDLR R + +P C RC+ ED++HV RDCP S W R G
Sbjct: 919 LCWLGFHEALPSNDLRFRRNLTANPMCMRCNGGVEDLMHVFRDCPASSNLWKRIGW--DN 976
Query: 182 TFFTQHQPIQ-WVKEHIQGDNECLFLASI*W-LWCWRNQTVLRDEDWDALHVASRMVHST 355
+ F +P + WV ++ + N LFLA + W W W NQTV + D
Sbjct: 977 SLFWVTRPFRSWVLKNCKQRNGLLFLAGMWWNFWDW-NQTVHAICERD------------ 1023
Query: 356 YDFAQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWI 535
I WQRP G IK+NVD SCI ++ M GG++R G W+
Sbjct: 1024 --------------------ICWQRPDIGTIKINVDGSCIRSSLIMGGGGVIRDHAGQWL 1063
Query: 536 LGFSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYA 715
GFS G G +LAELLA+ +GL W+ G ++V ES+ ++ + LL+SG I
Sbjct: 1064 SGFSANFGVGSAILAELLAMDHGLKLAWELGFKKVHLESDCLEAVHLLSSGIHIRHQKIL 1123
Query: 716 GLLQEIIQFDNNDWRLEFKHVMREANMCADYLAKDVHHLQSRGKRWKEPTIQLESLLLHD 895
++ + + + DW +E V+REAN AD++A+ H + + W I + ++ D
Sbjct: 1124 KVVSVVRSWLSRDWIVEVDFVVREANQVADFMARIGSHSSDKLRIWSTVPIDCQMYMVQD 1183
>KYP70337.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 299
Score = 155 bits (392), Expect = 7e-42
Identities = 93/274 (33%), Positives = 135/274 (49%), Gaps = 2/274 (0%)
Frame = +2
Query: 2 LIWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTP 181
L+WL+ H++LPTN R+R + SP C RCS N E ILH +RDCPHSRE W R + +
Sbjct: 6 LLWLLIHQALPTNVFRNRCNLQDSPYCLRCSGNIETILHCIRDCPHSRELWTRLDLAQSN 65
Query: 182 TFFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYD 361
F P+ W+ + + +++ L + +I W+W WRN +L W +V V Y
Sbjct: 66 DFQIL-DPVAWIFKQLSAEDKELRMLTIWWVWRWRNNMILDSSCWSVNYV----VRCIYL 120
Query: 362 FAQFLNPRKITDASGLLHIKWQR-PLP-GVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWI 535
A L+ +D H+ PL + LNVD + + GGL+R G W+
Sbjct: 121 DALNLHLSLSSD----FHLTPTLFPLDLSTVHLNVDGCWFSDQSRLGFGGLIRDVSGHWL 176
Query: 536 LGFSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYA 715
GFS GDP L ELLA+ GL W G + V C +++ ++ L H +A
Sbjct: 177 AGFSGNFSHGDPSLTELLAILEGLKIAWHMGFKTVQCMIDSMDIVQSLLHRDQAYLHSHA 236
Query: 716 GLLQEIIQFDNNDWRLEFKHVMREANMCADYLAK 817
L +I + W + F + R+ N AD LAK
Sbjct: 237 SYLFDIFSLVDKPWTMNFLWIDRDRNCSADALAK 270
>KYP62772.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 789
Score = 160 bits (404), Expect = 1e-40
Identities = 85/270 (31%), Positives = 135/270 (50%)
Frame = +2
Query: 8 WLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPTF 187
W I + +LPTN R M+ C RCS+ ED +H LRDCP S+E W + ++ +
Sbjct: 497 WSILNNALPTNSKRKASHMSILESCPRCSATTEDAIHALRDCPKSKELWNKLDLLEKNLW 556
Query: 188 FTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDFA 367
T + + WV ++ N + ++ W W WRN + +E WD V + + D +
Sbjct: 557 MTDNI-LTWVTNILKHKNTVKIITTMWWAWRWRNNHIFDEEKWDINKVIRHVYTTMADLS 615
Query: 368 QFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILGFS 547
+ +D + +WQ +K+NVD S P+++ M GG +R G WI GFS
Sbjct: 616 FMKKSQWDSDENN----QWQPLADQFVKVNVDGSFNPSSSVMTIGGSIRDRNGKWIFGFS 671
Query: 548 TKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYAGLLQ 727
G GD +LAEL A+K GL W++G R ++CE++ + + + G ++ H + ++
Sbjct: 672 KNMGRGDHILAELYAIKLGLEICWNKGWRNIICETDCREAMKCIIEGNNLR-HSHLEVID 730
Query: 728 EIIQFDNNDWRLEFKHVMREANMCADYLAK 817
EI W + + RE N AD LAK
Sbjct: 731 EINHLRRKTWNTKINCINRETNKVADILAK 760
>GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterraneum]
Length = 458
Score = 152 bits (385), Expect = 2e-39
Identities = 93/274 (33%), Positives = 140/274 (51%), Gaps = 2/274 (0%)
Frame = +2
Query: 2 LIWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTP 181
L WL H S+PT L H M S C RC ++ E LH +RDC SR W+R G +TP
Sbjct: 155 LFWLACHNSVPTLSLLHHRRMNPSSNCPRCCTHEETFLHCVRDCDLSRPIWHRLG-FITP 213
Query: 182 TFFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYD 361
FF+ +W+K G F S+ W W +N L++E W ++ + +
Sbjct: 214 DFFSSSDAHEWLKFGSTGSQAFAFSTSVWWAWRHQNLMCLQNETWSINRLSFNIQSMSAT 273
Query: 362 FAQFLNPRKITDASGLLHIKW-QRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWIL 538
+ R T S +H+KW PGVI LNVD SC+ + GG++R++ G ++
Sbjct: 274 ITSCFSSRS-TTTSEEIHVKWNNNNFPGVI-LNVDGSCLGSPVRAGFGGVIRNESGFYLS 331
Query: 539 GFS-TKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYA 715
GFS G+ D LLAEL + L + ++C S+++ I+L+ G I +H+YA
Sbjct: 332 GFSGFIQGSSDILLAELFVIYKSLTLAKNMAIDELVCYSDSLHCINLI-KGPSIKYHVYA 390
Query: 716 GLLQEIIQFDNNDWRLEFKHVMREANMCADYLAK 817
L+Q+I + + + H +RE N CAD+LAK
Sbjct: 391 VLIQDIKELMSQS-NITLCHTLREGNNCADFLAK 423
>KYP50116.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 519
Score = 153 bits (387), Expect = 3e-39
Identities = 100/297 (33%), Positives = 147/297 (49%), Gaps = 10/297 (3%)
Frame = +2
Query: 2 LIWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTP 181
L+W H +LPTN R R +A S C RCS + E I+H LRDCPHSR+ W+ SG L P
Sbjct: 209 LLWQGLHGALPTNLARFRRHLAPSSACARCSCSLESIIHALRDCPHSRQVWFDSG--LAP 266
Query: 182 TF-FTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDED----WDALHV-ASRM 343
F + + W++ I + + W+W +RN W + S +
Sbjct: 267 QISFAEMECGAWLRSIILHPQVAVLANLLWWIWRFRNNMTFPGNKHILCWSLWSLFISSL 326
Query: 344 VHSTYDFAQFLNPRKITDAS-GLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSD 520
++ + AQ N + ++++W P P +KLNVD S +P NAM GG++R+
Sbjct: 327 LYCQIEEAQVQNQIYLAKCKLWQVNVQWSPPEPSWVKLNVDDSFVPQLNAMGFGGVVRNS 386
Query: 521 KGDWILGFSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTS--GGD 694
+W LGF+ D AELLAV GL W EG ++V+CES+ + VI+ S G
Sbjct: 387 VREWKLGFAVGLQGSDSFQAELLAVVEGLELCWKEGCKKVICESDCLGVINTAKSLGKGP 446
Query: 695 ISFHMYAGLLQEIIQFDNNDWRLEFKHVMREANMCADYLAK-DVHHLQSRGKRWKEP 862
H Y +++ + + W +EF + RE N A LA+ V HL S W+ P
Sbjct: 447 QLRHKYYDIVKRLTDQCSRAWEVEFVCIPREINCVAHSLARWGVQHLNS-NVSWRSP 502
>GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
Length = 284
Score = 144 bits (363), Expect = 1e-37
Identities = 94/280 (33%), Positives = 134/280 (47%)
Frame = +2
Query: 62 MATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPTFFTQHQPIQWVKEHIQGDN 241
+++S C RCSS E ILH LRDCP SR W G +FF+ W++ + G N
Sbjct: 1 LSSSDICTRCSSGEETILHCLRDCPISRRIWNSLGFQ-NSSFFSCSDLELWLRNNSIGLN 59
Query: 242 ECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDFAQFLNPRKITDASGLLHIK 421
FLA + W W RN + + + V + V F P ++ + I
Sbjct: 60 APTFLAGLWWNWRARNIFCVGNASIHSFKVVAE-VSKLVALIVFCFPARVHTDTPRRWIS 118
Query: 422 WQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILGFSTKDGTGDPLLAELLAVKN 601
W + LNVD SC+ GGL R G+WI GFS G + +LAEL+AV +
Sbjct: 119 WHPCKTDCVVLNVDGSCLGDPGRAGFGGLFRKGDGEWIRGFSGYLGVTNIMLAELMAVYH 178
Query: 602 GLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYAGLLQEIIQFDNNDWRLEFKHVM 781
GL + G R+ C S++ V+ LL+ + SFH YA ++ I +W + KH +
Sbjct: 179 GLKIAREAGYNRLFCYSDSKTVLDLLSKERN-SFHCYAAIIANIQDLLVLEWDVSLKHSL 237
Query: 782 REANMCADYLAKDVHHLQSRGKRWKEPTIQLESLLLHDCL 901
RE N CAD+LAK + W+ P ++ LLL D L
Sbjct: 238 REGNFCADFLAKLGSANDEKFFIWESPPPDMQDLLLSDAL 277
>KYP75107.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 954
Score = 150 bits (379), Expect = 4e-37
Identities = 91/272 (33%), Positives = 134/272 (49%), Gaps = 2/272 (0%)
Frame = +2
Query: 5 IWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPT 184
+W H +LPTN +R +A S C RCS E ILH LRDCP+SRE G+
Sbjct: 658 LWQCLHSALPTNQVRADRRLAESGACSRCSCPQETILHALRDCPYSREVLMADGIN-AGW 716
Query: 185 FFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDF 364
FF+ QW+K I + ++ W+W +RN + DE W V +M ST +
Sbjct: 717 FFSGMDCFQWLKRIILHNEAIKLSITLWWVWRFRNNMLFNDELWTISAVLRKMTLSTVEN 776
Query: 365 AQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILGF 544
+ + +++ H W+ P +KLN D S + T+AM GG++R G W GF
Sbjct: 777 SVYNAKQRLWAE----HAIWRPPEHPWVKLNTDGSWVSGTSAMGMGGVIRDSAGMWRGGF 832
Query: 545 STKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLL--TSGGDISFHMYAG 718
S GD L AELLA+++GL WD G R+V C+ + + ++L S H +
Sbjct: 833 SRGVLHGDALRAELLALEDGLAFCWDGGFRKVSCDCDCLGAVTLFQDRSTDRDYLHKHYD 892
Query: 719 LLQEIIQFDNNDWRLEFKHVMREANMCADYLA 814
+++ I + DW + H+ RE N A LA
Sbjct: 893 VIRRIKRMLTRDWEVHVSHIPREINSVAHTLA 924
>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 148 bits (373), Expect = 3e-36
Identities = 91/274 (33%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Frame = +2
Query: 2 LIWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTP 181
LIWL H + PT L H MA + C RC N+E LH +RDC HS W++ G +T
Sbjct: 992 LIWLACHNAAPTLSLLHHRKMAPAATCSRCGENDESFLHCVRDCKHSAAIWHKLG-FVTA 1050
Query: 182 TFFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYD 361
FF+ W++ G FLA + W W RN L +E W ++ R+ S
Sbjct: 1051 AFFSVSSVQDWIRNFSSGSRAITFLAGLWWSWRHRNLMCLSNETWPLTRISFRINDSINA 1110
Query: 362 FAQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILG 541
+ +KW + LNVD SC+ T GG+ R++ G ++ G
Sbjct: 1111 IRSAFVKSNVIQPDSARMVKWNQGNHQCHILNVDGSCLGTPIRAGFGGIFRNNVGGYLSG 1170
Query: 542 FS--TKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYA 715
+S + T D LLAEL A+ GLI + G + C S+++ I+L+T +H YA
Sbjct: 1171 YSGFISEST-DILLAELTALHQGLIMAAEMGIEELACYSDSLLTINLITRTTS-KYHTYA 1228
Query: 716 GLLQEIIQFDNNDWRLEFKHVMREANMCADYLAK 817
L+Q+I + H RE N CADYLAK
Sbjct: 1229 VLIQDIKDL-LSAHNFSVYHCFREGNQCADYLAK 1261
>KYP66844.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 306
Score = 140 bits (354), Expect = 4e-36
Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Frame = +2
Query: 5 IWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPT 184
+W H +LPTN +R ++ S C RCS +E ILH LRDCP+SRE G+ T
Sbjct: 10 LWQCLHSALPTNQVRADKRLSESGACSRCSCPHETILHALRDCPYSREVLMAGGVS-TGW 68
Query: 185 FFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDF 364
F + QW+K I ++ W+W +RN + E W V ++ ST +
Sbjct: 69 SFLERDCFQWLKGIILHKEAITLSFTLWWIWRFRNHMLFNGELWTISAVRRKVTLSTVEN 128
Query: 365 AQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILGF 544
F R + L W P KLN D SC+ +AM GG++R G W GF
Sbjct: 129 EVFNAKRGLWLEQPL----WSPPEHPWAKLNTDGSCLSDISAMGMGGVIRDWTGRWRGGF 184
Query: 545 STKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHM--YAG 718
S TGD L AELLA+++GL W G R+V CE + ++ +SL + H+ +
Sbjct: 185 SRGASTGDALRAELLALEDGLSLCWASGFRKVSCECDCLEAVSLFQARSTERDHLHNHYD 244
Query: 719 LLQEIIQFDNNDWRLEFKHVMREANMCADYLA 814
+++ I DW + H+ R+ N A LA
Sbjct: 245 VIRRIQCMLAWDWVVYISHIPRDINSVAHTLA 276
>KYP33511.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 306
Score = 140 bits (354), Expect = 4e-36
Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Frame = +2
Query: 5 IWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPT 184
+W H +LPTN +R ++ S C RCS +E ILH LRDCP+SRE G+ T
Sbjct: 10 LWQCLHSALPTNQVRADRRLSESGACSRCSCPHETILHALRDCPYSREVLMAGGVS-TGW 68
Query: 185 FFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDF 364
F + QW+K I ++ W+W +RN + E W V ++ ST +
Sbjct: 69 SFLERDCFQWLKGIILHKEAITLSFTLWWIWRFRNHMLFNGELWTISAVRRKVTLSTVEN 128
Query: 365 AQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILGF 544
F R + L W P KLN D SC+ +AM GG++R G W GF
Sbjct: 129 EVFNAKRGLWLEQPL----WSPPEHPWAKLNTDGSCLSDISAMGMGGVIRDWTGRWRGGF 184
Query: 545 STKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHM--YAG 718
S TGD L AELLA+++GL W G R+V CE + ++ +SL + H+ +
Sbjct: 185 SRGASTGDALRAELLALEDGLSLCWASGFRKVSCECDCLEAVSLFQARSTERDHLHNHYD 244
Query: 719 LLQEIIQFDNNDWRLEFKHVMREANMCADYLA 814
+++ I DW + H+ R+ N A LA
Sbjct: 245 VIRRIQCMLAWDWVVYISHIPRDINSVAHTLA 276
>KYP39425.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 452
Score = 143 bits (360), Expect = 8e-36
Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 2/272 (0%)
Frame = +2
Query: 5 IWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPT 184
+W H++LPTN R R + C RC+ + E+ LH LRDCP S W +G TP
Sbjct: 152 LWKGLHDALPTNSKRFRCHITMVESCPRCNHSRENGLHALRDCPISYNVWEMTGD--TPV 209
Query: 185 -FFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYD 361
FF+ + + W+K I + W+W RN VL W +V ++
Sbjct: 210 DFFSMNCTMSWIKSLIFHPQAERLSLTAWWVWRLRNTMVLSTTRWTVPYVVRQIKADVAA 269
Query: 362 FAQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILG 541
FLN RK+ + W P +KLN D S P T M T G++R G W+ G
Sbjct: 270 NMVFLNHRKLWEEIA----SWVPPEHPNVKLNTDGSWRPNTRLMGTRGVIRDCVGRWLFG 325
Query: 542 FSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDIS-FHMYAG 718
F+ TGDPL AEL AV GL W+ G R ++CE++ +VI S + + +YA
Sbjct: 326 FANSARTGDPLKAELTAVVEGLSLCWNVGLRNIICETDCAEVIEACESLVSLERWQVYAD 385
Query: 719 LLQEIIQFDNNDWRLEFKHVMREANMCADYLA 814
L++ + + + +W + + + RE N A LA
Sbjct: 386 LVRALKELLSRNWLIFIRWIPREINKVAHTLA 417
>GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterraneum]
Length = 1075
Score = 144 bits (363), Expect = 6e-35
Identities = 96/273 (35%), Positives = 138/273 (50%), Gaps = 3/273 (1%)
Frame = +2
Query: 8 WLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPTF 187
WL+ H S+PT L + M+ S C RC E LH +RDC SR W+ G PTF
Sbjct: 774 WLVCHNSVPTLSLLNHRKMSNSFICARCGLQEETFLHCVRDCDFSRNIWHHIGFN-DPTF 832
Query: 188 FTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDF- 364
F+ +W+K G F AS+ W W RN L +E W +L+ S +HS D
Sbjct: 833 FSFTDAREWLKVGSTGSQAYTFSASVWWAWRHRNLMCLNNESW-SLNRLSFNIHSMVDIF 891
Query: 365 -AQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILG 541
+ F + T S L IKW + LNVD SC+ + GG++R+D G ++ G
Sbjct: 892 TSSFSSNSDGTSVSRL--IKWNNDNFSCVILNVDGSCLGSPVRAGYGGIIRNDSGFYLSG 949
Query: 542 FS-TKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHMYAG 718
FS + D LLAEL A+ GL D ++C S+++ I+L+ G + +H+YA
Sbjct: 950 FSGFIRESSDILLAELYAIYQGLTLAKDLVIDELVCYSDSLLCINLI-KGPIVKYHVYAV 1008
Query: 719 LLQEIIQFDNNDWRLEFKHVMREANMCADYLAK 817
L+Q+I + + + H RE N CAD+LAK
Sbjct: 1009 LIQDIKELISQS-NVTLCHTFREGNQCADFLAK 1040
>OMO81305.1 reverse transcriptase [Corchorus capsularis]
Length = 1538
Score = 144 bits (363), Expect = 6e-35
Identities = 92/310 (29%), Positives = 145/310 (46%), Gaps = 10/310 (3%)
Frame = +2
Query: 5 IWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPT 184
IWL+ L TN LR GM P C C E ++H+LRDCP SR+ W G L
Sbjct: 1227 IWLVRRGRLLTNSLRATWGMGNDPKCHLCGLEEESLVHILRDCPTSRKVWDYFGKPLNSD 1286
Query: 185 FFTQHQPIQWVKE-------HIQGDNECLFLASI*WLWCWRNQTVLRDEDW---DALHVA 334
+QW+ + H + + +F ++ +W R V+ + D ++ A
Sbjct: 1287 SL-----MQWLDDNLALRTLHDRVEWRIIFGVTLWRIWTRRCGFVMNEGDVSLDESSLTA 1341
Query: 335 SRMVHSTYDFAQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLR 514
+ MV + +N + + L ++W P V+KLN D + GG++R
Sbjct: 1342 NIMVTAGEVMKSLVNHKPLLSQD--LQVRWVPPEDAVVKLNTDGAAKGNPGVAGAGGVIR 1399
Query: 515 SDKGDWILGFSTKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGD 694
S G W++GF G + AEL A++ GL+ W+ R ++CE++A+ I L+ GD
Sbjct: 1400 SAVGSWLMGFKLHLGVCSNVEAELQAIRQGLLVAWNCSYRDIICETDALIAIDLI-KNGD 1458
Query: 695 ISFHMYAGLLQEIIQFDNNDWRLEFKHVMREANMCADYLAKDVHHLQSRGKRWKEPTIQL 874
FH LL +I Q + +WR + +H RE N CAD+LA L + P ++
Sbjct: 1459 AKFHPLGYLLIDIRQLLHREWRCKLQHTYREGNFCADWLANAACELDDNFELLPAPPDEV 1518
Query: 875 ESLLLHDCLG 904
+S+L D G
Sbjct: 1519 KSILNADTTG 1528
>KYP43651.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 552
Score = 140 bits (354), Expect = 2e-34
Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Frame = +2
Query: 5 IWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPT 184
+W H +LPTN +R ++ S C RCS +E ILH LRDCP+SRE G+ T
Sbjct: 256 LWQCLHSALPTNQVRADRRLSESGACSRCSCPHETILHALRDCPYSREVLMAGGVS-TGW 314
Query: 185 FFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDF 364
F + QW+K I ++ W+W +RN + E W V ++ ST +
Sbjct: 315 SFLERDCFQWLKGIILHKEAITLSFTLWWIWRFRNHMLFNGELWTISAVRRKVTLSTVEN 374
Query: 365 AQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILGF 544
F R + L W P KLN D SC+ +AM GG++R G W GF
Sbjct: 375 EVFNAKRGLWLEQPL----WSPPEHPWAKLNTDGSCLSDISAMGMGGVIRDWTGRWRGGF 430
Query: 545 STKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLLTSGGDISFHM--YAG 718
S TGD L AELLA+++GL W G R+V CE + ++ +SL + H+ +
Sbjct: 431 SRGASTGDALRAELLALEDGLSLCWASGFRKVSCECDCLEAVSLFQARSTERDHLHNHYD 490
Query: 719 LLQEIIQFDNNDWRLEFKHVMREANMCADYLA 814
+++ I DW + H+ R+ N A LA
Sbjct: 491 VIRRIQCMLAWDWVVYISHIPRDINSVAHTLA 522
>KYP64705.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 339
Score = 136 bits (343), Expect = 3e-34
Identities = 94/302 (31%), Positives = 142/302 (47%), Gaps = 3/302 (0%)
Frame = +2
Query: 5 IWLITHESLPTNDLRHRLGMATSPGCQRCSSNNEDILHVLRDCPHSREAWYRSGMMLTPT 184
+W H +LPTN +R +A S C CS E ILH LRDCP+SRE G + +
Sbjct: 43 LWQCLHLALPTNQVRADRRLAESGACSPCSCPRETILHALRDCPYSREVLMSGGFSVGWS 102
Query: 185 FFTQHQPIQWVKEHIQGDNECLFLASI*WLWCWRNQTVLRDEDWDALHVASRMVHSTYDF 364
F QW+K I + ++ W+W +RN + E W + +++ ST +
Sbjct: 103 FSVM-DCFQWLKGIILHKDVIELSITLWWVWRFRNNMLFNGELWQVSVIRRKVLMSTVEN 161
Query: 365 AQFLNPRKITDASGLLHIKWQRPLPGVIKLNVDRSCIPTTNAMCTGGLLRSDKGDWILGF 544
+ R++ G+ W+ P +KLN D S + T AM GG +R G W GF
Sbjct: 162 CVYNAKRRL----GVEQALWRPPEHPWVKLNTDGSWLSGTVAMGMGGAIRDCAGMWRGGF 217
Query: 545 STKDGTGDPLLAELLAVKNGLIHVWDEGARRVLCESNAVKVISLL--TSGGDISFHMYAG 718
S GD L AELLA++ GL W+ G ++V CE + + ++LL S H +
Sbjct: 218 SRGASQGDALRAELLALEEGLSLCWEGGFQKVSCECDCLGAVTLLQDRSPNRDYLHKHYD 277
Query: 719 LLQEIIQFDNNDWRLEFKHVMREANMCADYLAK-DVHHLQSRGKRWKEPTIQLESLLLHD 895
+++ + + DW + H+ RE N A LA V +L S W+ P + L D
Sbjct: 278 VIRRVKKMLARDWVVYVSHIPREINSVAHTLASWGVRNLGST-VFWRSPPDFILLPLGRD 336
Query: 896 CL 901
C+
Sbjct: 337 CM 338