BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00023034
         (1319 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU29820.1 hypothetical protein TSUD_223660 [Trifolium subterran...   322   e-100
KYP34033.1 Putative ribonuclease H protein At1g65750 family, par...   296   5e-93
GAU25119.1 hypothetical protein TSUD_274080 [Trifolium subterran...   309   7e-93
GAU40143.1 hypothetical protein TSUD_163120 [Trifolium subterran...   293   4e-92
KHN28363.1 Putative ribonuclease H protein, partial [Glycine soja]    293   5e-92
GAU24087.1 hypothetical protein TSUD_388800 [Trifolium subterran...   313   2e-91
GAU38148.1 hypothetical protein TSUD_395930 [Trifolium subterran...   293   5e-91
KYP44529.1 Putative ribonuclease H protein At1g65750 family [Caj...   294   1e-90
KHN20323.1 Putative ribonuclease H protein, partial [Glycine soja]    289   2e-90
KYP47047.1 Putative ribonuclease H protein At1g65750 family [Caj...   288   9e-90
GAU43110.1 hypothetical protein TSUD_373050 [Trifolium subterran...   303   2e-89
GAU18134.1 hypothetical protein TSUD_248350 [Trifolium subterran...   294   3e-89
GAU46725.1 hypothetical protein TSUD_100170 [Trifolium subterran...   293   7e-88
GAU50085.1 hypothetical protein TSUD_371690 [Trifolium subterran...   283   8e-88
GAU26515.1 hypothetical protein TSUD_361480 [Trifolium subterran...   292   6e-87
GAU25690.1 hypothetical protein TSUD_266170 [Trifolium subterran...   283   6e-87
GAU30230.1 hypothetical protein TSUD_67820 [Trifolium subterraneum]   279   2e-86
GAU48210.1 hypothetical protein TSUD_404970 [Trifolium subterran...   297   4e-86
KYP59667.1 Putative ribonuclease H protein At1g65750 family [Caj...   278   4e-86
KYP44023.1 Putative ribonuclease H protein At1g65750 family [Caj...   291   1e-85

>GAU29820.1 hypothetical protein TSUD_223660 [Trifolium subterraneum]
          Length = 672

 Score =  322 bits (824), Expect = e-100
 Identities = 159/424 (37%), Positives = 243/424 (57%), Gaps = 3/424 (0%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            + + P KV + +V IQRNFLWGGL + ++I WV WE +C PKK+GGLG++N+ L NLSLL
Sbjct: 254  YMRMPLKVWREVVRIQRNFLWGGLTKRRRINWVKWEDLCKPKKEGGLGIRNLRLVNLSLL 313

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGS-LVGSGRTDQ-QCLQNASRWMKDLFALEVNPGESG 966
             KWRWR       VW D++V +YG  ++G+ R D    LQ  S W +DL  L+ + G   
Sbjct: 314  TKWRWRLLSGEGEVWKDIIVAKYGERVMGNARLDNIVYLQFGSAWWRDLCNLDKDEG--- 370

Query: 965  KWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWD 786
             W    + +K+G G+++ FW D+W G + L+  FPRLF +S ++  +V  MG W    W 
Sbjct: 371  -WFNQVVLKKVGMGNSILFWKDVWAGDQSLEHRFPRLFGISIQQNEVVRNMGSWVNVEWR 429

Query: 785  WEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFG-L 609
            WE  WRR FFVWE ++ R   + ++ + P     D W WKP+   GFSVKS Y  L   L
Sbjct: 430  WELLWRRQFFVWENELVRELGE-VLNIFPLSEEVDRWVWKPNEAEGFSVKSLYDWLDSTL 488

Query: 608  RCNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIF 429
                   PL   +   IW+C +PSKVS LAW+L  +++PTK++L  + ++ +  +V C  
Sbjct: 489  VTRAILTPLEAFSFCSIWKCVVPSKVSALAWQLFLDRIPTKDNLCRRRIIRSEDAV-CDM 547

Query: 428  CSRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRH 249
            C   +E   H+F  C+FA +VW A+  W G +  +    +  +    G    +  ++   
Sbjct: 548  CGGVSETSRHVFMHCDFAAQVWYAICRWLGVVVLLPPDVMTMYGSLVGCGSNKKIKKGFS 607

Query: 248  IIWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNP 69
            I+W+A +WV+W +RN+ +F   +  V D + +I+ +SW WF++   K   LLY +W  +P
Sbjct: 608  IVWLAFIWVMWRSRNDKVFNNVAGVVEDALNHIQRISWQWFLSNTAKGPCLLY-EWSWDP 666

Query: 68   LGCI 57
              C+
Sbjct: 667  GKCM 670


>KYP34033.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
            cajan]
          Length = 443

 Score =  296 bits (759), Expect = 5e-93
 Identities = 158/421 (37%), Positives = 214/421 (50%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F+K P +V K IVS+QR FLWGG+   KK+ W+SW+K+ +PK+KGGLGVKN+ LFN SLL
Sbjct: 25   FFKIPNRVSKEIVSLQRRFLWGGVGDQKKVCWISWDKVTLPKEKGGLGVKNIILFNRSLL 84

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGSLVGSGRTDQQCLQNASRWMKDLFALEVNPGESGKW 960
            AKWRW     SS++W  +L  RY    G     Q   Q  S W +DL  +     E   W
Sbjct: 85   AKWRWNLFHQSSSMWAQVLQSRYRG--GHNLCAQASSQKDSIWWRDLL-MVCGGVEEDNW 141

Query: 959  ITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDWE 780
                I  ++G GS V FW D WVG   L   FPRLF  S+++   +AE+G +    W W 
Sbjct: 142  FDKLIEWRVGVGSKVRFWLDKWVGPTNLAVAFPRLFISSDQQLASIAEIGAFVNGEWVWH 201

Query: 779  WCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLRCN 600
              WRR  F WE  + +     +     + +  DSW W  +S+  FSVKSAY I+      
Sbjct: 202  LRWRRNRFEWEIPLEQQLLRLINSRIFNSSQCDSWSWVAESSGMFSVKSAYQIILAESVT 261

Query: 599  VPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFCSR 420
            +    +F     LIW    P KV   AWRLL   LPT ++LA + +L       CIFC  
Sbjct: 262  IEDHDIF----KLIWSIPAPPKVLFFAWRLLNRGLPTVDNLARRNILLGEHESRCIFCKV 317

Query: 419  DTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHIIW 240
            D E  +H+F TC    RVW     W     P+     +HF      I+  +   + H +W
Sbjct: 318  DIETTTHIFCTCPMVDRVWKQCLSWLNCPAPLPRQIFDHFSFLPAPIQNESEAETWHTVW 377

Query: 239  MATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPLGC 60
            +AT+W LW  RN  IF G + +   +V +I    W W ++    +    +S W SNP  C
Sbjct: 378  LATMWTLWRYRNKCIFDGGTFEQGSIVRDILIFCWRW-LSTLKPSFAYSFSQWSSNPGPC 436

Query: 59   I 57
            I
Sbjct: 437  I 437


>GAU25119.1 hypothetical protein TSUD_274080 [Trifolium subterraneum]
          Length = 937

 Score =  309 bits (792), Expect = 7e-93
 Identities = 169/426 (39%), Positives = 232/426 (54%), Gaps = 5/426 (1%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F K P  V+KSI  IQR FLWGG+    KI WV W+++C P+ +GGLGV++V   NLSLL
Sbjct: 516  FLKLPAAVLKSITRIQREFLWGGVKGGSKISWVKWKEVCKPRSQGGLGVRDVGKVNLSLL 575

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGSLVGSGRTDQQC--LQNASRWMKDLFALEVNPGESG 966
             KWRW+     +AVW D+LV RYG           C    +AS W +DL  +++   E G
Sbjct: 576  IKWRWKLLQKDAAVWKDVLVARYGENARHNVLWIGCPIPSSASCWWRDLCRIDLT--EEG 633

Query: 965  KWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMG-RWTGDRW 789
             W    I R++G G    FW D WVG   L E FPRLF +S +KE +V+E+     G  W
Sbjct: 634  SWFAKNISRRVGRGDTTRFWKDCWVGQVPLCESFPRLFSISLQKEALVSEIRVGGEGVSW 693

Query: 788  DWEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGL 609
             WEW WRR  FVWE ++    QD +  ++ S + +D W W  +    F+VKSAY +L G 
Sbjct: 694  -WEWGWRRSLFVWEEELLLGLQDFISPMAFSTD-DDVWYWGLEDGGVFTVKSAY-LLLGR 750

Query: 608  RCNVPSDPLFCS--ACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTC 435
                 S    C     N IW+   PSKV   +W+LL+N++PT++ L+ +G+L A GS  C
Sbjct: 751  MFASFSMFNVCELRVLNSIWRSPAPSKVIAFSWKLLRNRIPTRDCLSRRGILAAGGSREC 810

Query: 434  IFCSRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRS 255
            + C    E   HLF  C+FA+RVW A+  W G +  M  +    F  F G      R + 
Sbjct: 811  VHCQGREETALHLFLFCDFAFRVWSAIFQWLGVVIVMPPNLFILFDCFVGAAGCNKRAKG 870

Query: 254  RHIIWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCS 75
              +IW  TVW +W +RN ++F     D   V+  IK LSW W ++R      LLY +WC 
Sbjct: 871  FLLIWHTTVWAIWRSRNEILFANGVLDPSSVIDEIKLLSWRWGLSRQKIPMCLLY-EWCW 929

Query: 74   NPLGCI 57
            +P  C+
Sbjct: 930  DPGICL 935


>GAU40143.1 hypothetical protein TSUD_163120 [Trifolium subterraneum]
          Length = 419

 Score =  293 bits (751), Expect = 4e-92
 Identities = 155/427 (36%), Positives = 233/427 (54%), Gaps = 10/427 (2%)
 Frame = -1

Query: 1307 PKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLLAKWR 1128
            P  V+K I+ IQR FLWGG+   KKI WVSW+++C P+ +GGLGV++V   NLSLL KWR
Sbjct: 2    PAVVIKKIIRIQREFLWGGVKGGKKISWVSWKEVCRPRSEGGLGVRDVAKVNLSLLIKWR 61

Query: 1127 WRFCMDSSAVWCDLLVHRYGSL-------VGSGRTDQQCLQNASRWMKDLFALEVNPGES 969
            WR      A W ++LV +YG +       +G    ++      S W KD+  +++   E 
Sbjct: 62   WRLLQSGYAFWKEVLVAKYGIMARFKVHWIGHALPNR-----VSLWWKDICGIDIR--ED 114

Query: 968  GKWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRW 789
            G W    + RK+GNG++  FW D W+G+  L + FPRLF LS  ++ MV E     G   
Sbjct: 115  GSWFARNMCRKLGNGNSTRFWLDRWIGSLPLSDQFPRLFSLSLNQQGMVREFRDVRGGED 174

Query: 788  DWEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAY---GIL 618
             W   WRR  FVWE ++ +  QD L    P    ED W W+ + +  FSV S Y   G +
Sbjct: 175  GWVMRWRRRLFVWEEELLQRLQDLLPVDVPWSEAEDRWSWRLEEDGSFSVSSMYWYLGSV 234

Query: 617  FGLRCNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVT 438
            F    +  +  L+      IW+  +PSKV    W+LL+N++PT+ +LA++G+    G + 
Sbjct: 235  FSQASSFNAQELW--VFGKIWKSPVPSKVIAFTWKLLRNRIPTRCNLASRGI-QLIGGLD 291

Query: 437  CIFCSRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRR 258
            C+ C    E+ +HLF  C+FA ++W A+  W G +  +  +    F  F G    +  R+
Sbjct: 292  CVHCVGREESGTHLFMFCDFAGQIWNAIFRWLGLVLVIPPNFFLLFECFTGAAANKKIRK 351

Query: 257  SRHIIWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWC 78
               +IW  T+W+LW +RN+++F     DV  V+ +IK LSW W ++R      L Y +WC
Sbjct: 352  GYALIWHTTIWMLWKSRNDIMFSNGVIDVEKVIDDIKLLSWRWGLSRHSIPVCLFY-EWC 410

Query: 77   SNPLGCI 57
             +P  C+
Sbjct: 411  WDPGLCL 417


>KHN28363.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 417

 Score =  293 bits (750), Expect = 5e-92
 Identities = 142/386 (36%), Positives = 217/386 (56%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F+KAPK V+K +  IQR+FLWG  ++ +KI WVSWE IC PKK+GGLGVKN+E+FN+SLL
Sbjct: 32   FFKAPKVVIKELTQIQRDFLWGSHEEERKICWVSWEDICKPKKEGGLGVKNLEVFNISLL 91

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGSLVG--SGRTDQQCLQNASRWMKDLFALEVNPGESG 966
            AKW+WR   D +A+W DLL  RYG+L+   +   D+      S W +DL  LE +  ++ 
Sbjct: 92   AKWKWRCIHDHNALWRDLLAFRYGNLIAKQTCSLDRSWGTKDSIWWRDLMLLEKDLSQNQ 151

Query: 965  KWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWD 786
             +   A+   +G+G ++ FW + W+G+E LK+ FP LF +S+++   V   G W  D+W 
Sbjct: 152  NFFQRAVSCDVGDGQSILFWYNKWLGSEPLKDAFPELFAISSQQLVSVGNAGSWRRDQWT 211

Query: 785  WEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLR 606
            W   W+R     E +     +  L+ V       D W W   ++  F+V S Y     L 
Sbjct: 212  WGLTWKRQLNPNEEESLHSLETILVDVHLVAESHDRWKWSLHNSKLFTVSSCYSFAMSLV 271

Query: 605  CNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFC 426
                 +       +++W+  +PSKV++  WRLL ++LPTK++L  + V+  N    C  C
Sbjct: 272  NQTQMNSDILDILSIVWKVPVPSKVALFCWRLLLDRLPTKDNLIRRNVVINNS--RCSLC 329

Query: 425  SRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIK-GRARRRSRH 249
                EN  HLFF C+F+  +W  V  W G +  +   G+ HF E+   +K   +R +   
Sbjct: 330  DSCDENVVHLFFHCDFSNCIWKEVLSWIGIVDVIAVGGVQHFWEYDRLLKYNTSRNKVPF 389

Query: 248  IIWMATVWVLWITRNNVIFRGASADV 171
            + W+AT+W++W  RNN IF+    D+
Sbjct: 390  MFWLATLWIIWQVRNNSIFKEEEKDI 415


>GAU24087.1 hypothetical protein TSUD_388800 [Trifolium subterraneum]
          Length = 1985

 Score =  313 bits (801), Expect = 2e-91
 Identities = 158/426 (37%), Positives = 247/426 (57%), Gaps = 5/426 (1%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            + K P  V K IV++QRNFLWGGL + ++I WV W +IC PKK+GGL ++++   NLSLL
Sbjct: 1567 YMKMPLMVWKEIVTLQRNFLWGGLSKRRRICWVKWAEICKPKKEGGLSIRDLRTVNLSLL 1626

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYG-SLVGSGRTDQQCLQN-ASRWMKDLFALEVNPGESG 966
            AKWRW+   +   VW ++++ +YG  ++G+ R D++ + + +S W +DL  L+   G   
Sbjct: 1627 AKWRWKLLSEEEEVWKNVIIAKYGIHMLGNARLDERDIGSMSSLWWRDLCRLDKGVG--- 1683

Query: 965  KWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWD 786
             W      + +G G+++ FW ++WVG + L+  FPRLF +S +++ MV E+G W    W 
Sbjct: 1684 -WFNHFARKYLGCGNSIKFWKEVWVGGQSLELQFPRLFGISVQQDDMVREVGSWVNGVWR 1742

Query: 785  WEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGL- 609
            W   WRR  FVWE D+    +  L  +S ++  ED W W+ +  +GF+VKS Y  L  L 
Sbjct: 1743 WGLRWRRVLFVWEEDLVSELELVLNNISITEE-EDRWVWRLNVGDGFTVKSLYEALDPLL 1801

Query: 608  --RCNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTC 435
              RC V S   F  A   IW+  +PSKVS LAW+L  +++PTK +L  +G+L  +   +C
Sbjct: 1802 TPRCLVSSFESF--AYRSIWKSAVPSKVSALAWQLFLDRIPTKVNLYKRGILRMD-HASC 1858

Query: 434  IFCSRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRS 255
            + C  + E   HLF  C++A  +W AV  W G    +    +  +    G  + +  R+ 
Sbjct: 1859 VLCGEEAETARHLFLHCDYAAGIWYAVCRWLGVFAVLPADVMMSYGLLVGCGRNKKIRKG 1918

Query: 254  RHIIWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCS 75
              I+WMA +WV+W  RN  +F+ A+ +V D V  ++ LSW W++N+   +  LLY +W  
Sbjct: 1919 FAIVWMAFIWVIWKVRNERVFKNATVEVTDAVDMVQRLSWQWYLNKMASSSCLLY-EWIW 1977

Query: 74   NPLGCI 57
            NP  C+
Sbjct: 1978 NPCECM 1983


>GAU38148.1 hypothetical protein TSUD_395930 [Trifolium subterraneum]
          Length = 503

 Score =  293 bits (751), Expect = 5e-91
 Identities = 145/425 (34%), Positives = 232/425 (54%), Gaps = 4/425 (0%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            + K P KV + +V +QR FLW GL +  K  WV W+ IC PKK+GGLGV+++ L N+SLL
Sbjct: 85   YMKMPLKVWRELVKLQRVFLWAGLSKQTKTCWVKWDVICKPKKEGGLGVRDLRLVNISLL 144

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYG-SLVGS-GRTDQQCLQNASRWMKDLFALEVNPGESG 966
            AKWRW+       VW +++  RYG  ++G     D    +  S W +DL  L+       
Sbjct: 145  AKWRWKLLTTECEVWKEVVGARYGRDVIGKVNLGDIDVTRTGSCWWRDLCLLD----SDV 200

Query: 965  KWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWD 786
            +W + A+G+++G G +  FWN++W+G + L++ FPRLF +S ++  ++  MG      W 
Sbjct: 201  RWFSSAVGKRVGRGDSTMFWNEIWIGDQPLRQRFPRLFGMSTQQNEVICNMGSLVNGLWH 260

Query: 785  WEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLR 606
            WE  WRR FF WE D +  F D ++Q +P+   +D W W  D   G++  SAY ++   +
Sbjct: 261  WELQWRRNFFTWEEDQYNHFLDIIVQFAPTVQ-QDRWLWLGDGVQGYTANSAYSLVVN-K 318

Query: 605  CNVPS--DPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCI 432
               PS  DP+      ++W+C  PSKVS  +W+L+ ++L TK++L  + ++ A+    C+
Sbjct: 319  LVTPSVCDPINDLVFKILWKCGAPSKVSAFSWQLMLDRLQTKDNLMKRRIIQAHHG-NCV 377

Query: 431  FCSRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSR 252
            FC+   E+ SHLF  C+   +VW  +  W G    + ++ ++           +  R   
Sbjct: 378  FCNLAQESASHLFLHCDRVAKVWYDLMRWLGLTVILPHNIVSSLAILVTCANNKKERAGL 437

Query: 251  HIIWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSN 72
             +IW A +WV+W  RN  +F        +V   +K  SW WF+ R  K   +LY +W  +
Sbjct: 438  CLIWNAYMWVIWTVRNVCVFNNGVFMEEEVADQVKLESWKWFIGRVAKGPCMLY-EWRWS 496

Query: 71   PLGCI 57
            PL C+
Sbjct: 497  PLDCL 501


>KYP44529.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 567

 Score =  294 bits (753), Expect = 1e-90
 Identities = 146/421 (34%), Positives = 220/421 (52%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F++ P  V K IVS+QRNFLWG  +  +KI W+SW+++ +PKK GGLGVKN+  FN++LL
Sbjct: 153  FFRIPPSVSKEIVSLQRNFLWGCKEDQRKICWISWDRVTLPKKMGGLGVKNIIRFNMALL 212

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGSLVGSGRTDQQCLQNASRWMKDLFALEVNPGESGKW 960
            AKWRW     + ++W  +L  RYG   G+    Q   +  S W +DL  +     E   W
Sbjct: 213  AKWRWSLFHQNDSLWARVLYSRYGG--GTNLCAQSSSRRDSLWWRDLVVV-CGGLEQDNW 269

Query: 959  ITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDWE 780
                +   IG+GS V FW D W+G  CL  +FPRLF +S ++   + +MG WTG RW W+
Sbjct: 270  FDRKVKWSIGSGSRVRFWLDKWIGPICLASLFPRLFTISEQQNQFIQDMGYWTGHRWAWQ 329

Query: 779  WCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLRCN 600
              WRR  F WE  + +     L++ +P     DSW W  + +  ++V+SAY  +     +
Sbjct: 330  LHWRRERFEWEIPLEQQLMQRLLECNPRARQVDSWWWLGEPSGTYTVRSAYSAITS-EAD 388

Query: 599  VPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFCSR 420
            V S+     A + +W    P K  I AWR++   LPT ++LA++ ++ +     C+FC  
Sbjct: 389  VGSN---IGAPSSVWSIPAPPKAKIFAWRMMSRGLPTVDNLASRSIVLSENDALCVFCKS 445

Query: 419  DTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHIIW 240
            D E   HLF TC    +VW     W     P+    ++HF    G      +      +W
Sbjct: 446  DIETDYHLFCTCPVVDKVWKVCLSWINCPAPLPRCILDHFNFIPGPFHQSTQAVYWRTVW 505

Query: 239  MATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPLGC 60
            + T W++W TRN   F+ +S     +V  I+  SW W ++   K+    +S WC NP  C
Sbjct: 506  LVTTWIVWRTRNLCRFKDSSFCFDSMVKEIQVHSWRW-LSSFTKSFRYSFSQWCCNPGLC 564

Query: 59   I 57
            +
Sbjct: 565  L 565


>KHN20323.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 417

 Score =  289 bits (740), Expect = 2e-90
 Identities = 140/386 (36%), Positives = 216/386 (55%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F+KAPK V+K +  IQR+FLWG  ++ +KI WVSWE IC PKK+GGLGVKN+E+FN+SLL
Sbjct: 32   FFKAPKVVIKELTQIQRDFLWGSHEEERKICWVSWEDICKPKKEGGLGVKNLEVFNISLL 91

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGSLVG--SGRTDQQCLQNASRWMKDLFALEVNPGESG 966
            AKW+WR   D +A+W DLL  RYG+L+   +   D+      S W +DL  LE +  ++ 
Sbjct: 92   AKWKWRCIHDHNALWRDLLAFRYGNLIAKQTCSLDRSWGTKDSIWWRDLMLLEKDLSQNQ 151

Query: 965  KWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWD 786
             +   A+   +G+G ++ FW + W+G+E LK+ FP LF +S+++   V     W  D+W 
Sbjct: 152  NFFQRAVSCDVGDGQSILFWYNKWLGSEPLKDAFPELFAISSQQLESVGNASSWRRDQWT 211

Query: 785  WEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLR 606
            W   W+R     E +     +  L+ V       D W W   ++  F+V S Y     L 
Sbjct: 212  WGLTWKRQLNPNEEESLHSLETILVDVHLVAESHDRWKWSLHNSKLFTVSSCYSFAMSLV 271

Query: 605  CNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFC 426
                 +       +++W+  +PSKV++  WRLL ++LPTK++L  + V+  N    C  C
Sbjct: 272  NQTQMNSDILDILSIVWKVPVPSKVALFCWRLLLDRLPTKDNLIRRNVVINNS--RCSLC 329

Query: 425  SRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIK-GRARRRSRH 249
                EN  HLFF C+F+  +W  +  W G +  +   G+ HF E+   +K   +R +   
Sbjct: 330  DSCDENVVHLFFHCDFSKCIWKEILSWIGIVDVIAVGGVQHFWEYDRLLKYNTSRNKVPF 389

Query: 248  IIWMATVWVLWITRNNVIFRGASADV 171
            + W+AT+W++W  RNN IF+    D+
Sbjct: 390  MFWLATLWIIWQVRNNSIFKEEEKDI 415


>KYP47047.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 448

 Score =  288 bits (738), Expect = 9e-90
 Identities = 155/421 (36%), Positives = 213/421 (50%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F+K P +V K IV +QR FLWGG+   KK+ W+SW+K+ +PK+KGGLGVKN+ LFN SLL
Sbjct: 30   FFKIPNRVAKEIVFLQRRFLWGGVGDQKKVCWISWDKVTLPKEKGGLGVKNIILFNRSLL 89

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGSLVGSGRTDQQCLQNASRWMKDLFALEVNPGESGKW 960
            AKWRW     SS++W  +L  RY    G     Q   Q  S W +DL  +     E   W
Sbjct: 90   AKWRWNLFHQSSSMWAQVLQSRYRG--GHNLCAQASSQKDSIWWRDLL-MVCGGVEEDNW 146

Query: 959  ITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDWE 780
                I  ++G GS V FW D WVG   L   FPRLF  S+++   +AE+G +    W W 
Sbjct: 147  FDKLIEWRVGVGSKVRFWLDKWVGPTNLAVAFPRLFISSDQQLASIAEIGAFVNGEWVWH 206

Query: 779  WCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLRCN 600
              WRR  F WE  + +     +     + +  DSW W  +S+  FSVKSAY I+      
Sbjct: 207  LRWRRNRFEWEIPLEQQLLRLINSRIFNSSQCDSWSWVAESSGMFSVKSAYQIILAESVT 266

Query: 599  VPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFCSR 420
            +    +F     LIW    P KV   AWRLL   LPT ++LA + +L       CIFC  
Sbjct: 267  IEDHDIF----KLIWSIPAPPKVLFFAWRLLNRGLPTVDNLARRNILLGEHESRCIFCKV 322

Query: 419  DTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHIIW 240
            D E  +H+F TC    RVW     W     P+     +HF      IK  ++ ++ H +W
Sbjct: 323  DIETTTHIFCTCPMVDRVWKQCLSWLNCPAPLPRQIFDHFSFLPAPIKTESQAKTWHTVW 382

Query: 239  MATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPLGC 60
            +AT+W LW  R+  IF   + +   +V +I    W W ++    +    +S W SN   C
Sbjct: 383  LATMWTLWRYRDKWIFDSGTFEQGSIVRDILIFCWRW-LSTLKPSFAYSFSQWSSNHGPC 441

Query: 59   I 57
            I
Sbjct: 442  I 442


>GAU43110.1 hypothetical protein TSUD_373050 [Trifolium subterraneum]
          Length = 1099

 Score =  303 bits (776), Expect = 2e-89
 Identities = 159/422 (37%), Positives = 228/422 (54%), Gaps = 3/422 (0%)
 Frame = -1

Query: 1313 KAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLLAK 1134
            K P  V K +V +QR FLWGG+    KI WV W  +C  K KGGLGV++V + NLSLLAK
Sbjct: 679  KMPVNVWKQVVRLQRVFLWGGVKGGNKIKWVKWSVVCRAKNKGGLGVRDVRIVNLSLLAK 738

Query: 1133 WRWRFCMDSSAVWCDLLVHRYGS--LVGSGRTDQQCLQNASRWMKDLFALEVNPGESGKW 960
            WRWR  +    +W ++LV +YG   L     +D +   +AS+W KD+ +++    E   W
Sbjct: 739  WRWRLLLPGRPLWKEILVAKYGEHILHRVDWSDYRIPSSASKWWKDICSID-KVVEDKNW 797

Query: 959  ITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDWE 780
            + + +GRK+GNG++ SFW+  W+G   L  IFPRLF LSN K+CMV +     GD   W 
Sbjct: 798  LVEEVGRKVGNGNSTSFWSTKWIGDAPLSVIFPRLFSLSNHKDCMVRDFYEDDGDNERWR 857

Query: 779  WCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILF-GLRC 603
            + WRR  F WE D     ++ L+    S + +DSW W+PD +  FSVKSAY +L   LR 
Sbjct: 858  FSWRRELFQWEVDRLTRLKELLVSFVFSSD-DDSWIWRPDPDGVFSVKSAYNLLIEELRS 916

Query: 602  NVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFCS 423
                +         IW+   PSKV   +W+LL +++PT+ +L  +G+LG +    C+ C 
Sbjct: 917  GEELEEEAALIFEQIWESPAPSKVIAFSWQLLYDRIPTRRNLEVRGLLGLDSPWECVGCV 976

Query: 422  RDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHII 243
               E  +HLF  C  A  VW  V  W G +       +  F    G+ + +  R    +I
Sbjct: 977  GSVETTTHLFLHCPSALMVWYEVFRWIGVIIVTPPSMMILFEVLRGSARNKKTRLGFLMI 1036

Query: 242  WMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPLG 63
            W AT+W +W  RNN IF   S     +V  IK LSW W ++R  K    ++ +W  +P  
Sbjct: 1037 WHATIWCIWRARNNSIFANGSFSPKVIVEEIKVLSWKWCLSR-TKISPCMFYEWTWDPGE 1095

Query: 62   CI 57
            C+
Sbjct: 1096 CL 1097


>GAU18134.1 hypothetical protein TSUD_248350 [Trifolium subterraneum]
          Length = 694

 Score =  294 bits (753), Expect = 3e-89
 Identities = 162/423 (38%), Positives = 231/423 (54%), Gaps = 3/423 (0%)
 Frame = -1

Query: 1316 YKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLLA 1137
            +K P  V K IV++QR FLWGG+  + KIPWV+W  +C PKK+GGLGVK++ + N+SLLA
Sbjct: 276  FKMPVGVWKKIVNLQRRFLWGGVAGSSKIPWVNWRDVCRPKKEGGLGVKDLRIMNISLLA 335

Query: 1136 KWRWRFCMDSSAVWCDLLVHRY-GSLVGSGRTDQQCLQN-ASRWMKDLFALEVNPGESGK 963
            KW+WR   +  ++W ++L  RY G   G G   +  + + AS W  DL  + V  GE   
Sbjct: 336  KWKWRLLSEGKSIWKNVLEDRYRGGESGVGWMSKVWVSSKASPWWNDLMTMGVVAGEDR- 394

Query: 962  WITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDW 783
             +     +KIGNG +  FW+D WVGT+ LKE+FPRLF +S +KEC V E+G     RWD 
Sbjct: 395  -LHGIFFKKIGNGGDTRFWHDSWVGTQPLKELFPRLFLISVQKECSVFEVGGGVSGRWDL 453

Query: 782  EWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLRC 603
            +W  RR  FVWE ++     + L  +    N ED W     + + FSV S Y  L G+  
Sbjct: 454  KW--RRNLFVWEEELRELLVNVLTPIQLI-NKEDEWRCHYFNGSLFSVSSLYKYLSGIII 510

Query: 602  N-VPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFC 426
              +  DP        +W+   PSKV + +W+LL ++LPTK +LA +G++  + +  C+ C
Sbjct: 511  PPISRDPELVRDLGFLWESLAPSKVIVFSWQLLLSRLPTKANLAIRGIVEHDSNSFCVLC 570

Query: 425  SRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHI 246
              +TE   HLF  C FA R+W  V  W G  G +       F  F     G  R +    
Sbjct: 571  PMNTECEGHLFGWCAFASRIWSRVFDWFGWGGVVPRDPREIFQSFCRGRPGGRRIKGLLA 630

Query: 245  IWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPL 66
            +W   VW +W  RN++IF      + DV+ +I +LSW W + +       LY +W S PL
Sbjct: 631  VWHVVVWAIWRARNDLIFNSKVPVLEDVLHSIMSLSWKWLLEKKKGGSCSLY-EWKSYPL 689

Query: 65   GCI 57
             CI
Sbjct: 690  DCI 692


>GAU46725.1 hypothetical protein TSUD_100170 [Trifolium subterraneum]
          Length = 776

 Score =  293 bits (749), Expect = 7e-88
 Identities = 162/427 (37%), Positives = 234/427 (54%), Gaps = 9/427 (2%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            + K P KV + +V IQRNFLWGGL    K  WV W+ IC PK + GLG++++ L N SLL
Sbjct: 357  YMKMPTKVWRQLVKIQRNFLWGGLSNRSKTCWVKWDDICRPKNEVGLGIRDLRLVNTSLL 416

Query: 1139 AKWRWRFCM-DSSAVWCDLLVHRYGSLVGSGRTDQQCL------QNASRWMKDLFALEVN 981
            AKWRW+    +   VW  ++  RYGS V   R    CL      ++ S W +D+  LE  
Sbjct: 417  AKWRWKILSHEEEEVWKQIVKARYGSDVIGNR----CLGAADIPRSTSNWWRDICNLE-- 470

Query: 980  PGESGKWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWT 801
             GE   W + A+G+K+G G + SFWN++W+G + L++ FPRLF +S +K+ ++  +G  T
Sbjct: 471  -GEFS-WFSSAVGKKVGRGDSTSFWNEIWIGDQSLRQRFPRLFGISLQKQEVIQNLGSLT 528

Query: 800  GDRWDWEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGI 621
              RW WE  WRR  F WE D +R F D +   +P  N  D W W  D   GF+VKSAY  
Sbjct: 529  EGRWQWELLWRRDRFQWEEDQYREFIDVIAPFAPVDN-HDRWLWLGDGIQGFTVKSAYMR 587

Query: 620  LFGLRCNVP-SDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGS 444
            L  L  N    +P+       +W+C  PSKV    W+LL +++ TK +L    +L ++  
Sbjct: 588  LENLVNNRRILEPVENFVFKRLWKCAAPSKVHAFVWQLLLDRVQTKANLFKCKMLHSD-Q 646

Query: 443  VTCIFCSRDTENHSHLFFTCEFAYRVWMAVNLWSG-TMGPMFNHGINHFLEFAGTIKGRA 267
             TC+ C    E   HLF  C++  +VW  +  W G T+    N  I+ F  +A  +  + 
Sbjct: 647  QTCVLCDGKIETAVHLFLHCDWVAKVWYEITRWLGFTLIIPPNLAIS-FAMWATCVSNKK 705

Query: 266  RRRSRHIIWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYS 87
             ++   +IW   +WV+W TRN  IF   +A   +VV  IK +SW WF+ R  K   LLY 
Sbjct: 706  EKKGICLIWNVFMWVVWKTRNGCIFNNMAAICEEVVEQIKVMSWQWFIGRMAKAPCLLY- 764

Query: 86   DWCSNPL 66
            +W  +P+
Sbjct: 765  EWKWSPI 771


>GAU50085.1 hypothetical protein TSUD_371690 [Trifolium subterraneum]
          Length = 438

 Score =  283 bits (724), Expect = 8e-88
 Identities = 153/423 (36%), Positives = 228/423 (53%), Gaps = 4/423 (0%)
 Frame = -1

Query: 1313 KAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLLAK 1134
            K P K++K ++ IQR FLWGG+    KI WV W  +C  K KGGLGV++V L NLSLLAK
Sbjct: 18   KIPVKILKQVICIQREFLWGGVRGENKIKWVKWSMVCKEKSKGGLGVRDVRLANLSLLAK 77

Query: 1133 WRWRFCMDSSAVWCDLLVHRYGSLVGSGRTDQQCLQ---NASRWMKDLFALEVNPGESGK 963
            WRWR  +  + +W ++LV +YG+ +   R D + ++    AS+W KD+  L+    ++  
Sbjct: 78   WRWRLLLPGNPLWKEVLVAKYGNHI-LNRVDWRDIRIPTLASKWWKDICTLD-KVVDNHN 135

Query: 962  WITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDW 783
            W+ +++ RK+GNG++ SFW   W+G   L   FP LF LSN K  MV       G+ W W
Sbjct: 136  WLAESMIRKVGNGTSTSFWCSNWIGEAPLSVTFPLLFSLSNHKNGMVRNFCDHVGENWRW 195

Query: 782  EWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILF-GLR 606
             + WRR  F WE D+    ++ L  V  S  VED W WK D    FSVKSAY  L   L 
Sbjct: 196  SFSWRRDLFQWEEDLVVRLREILEPVVLSL-VEDFWSWKLDPEGKFSVKSAYTFLVEELT 254

Query: 605  CNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFC 426
             +   +    +  + IW    PSKV   +W+LL +++PT+ +L  +G+LG +    C+ C
Sbjct: 255  RDDDLEEAMATVFDQIWDSPAPSKVIAFSWQLLSDRIPTRRNLEIRGLLGLDMPWECVGC 314

Query: 425  SRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHI 246
                E+ +HLF  C  A  VW  V  W G +  +       F    G+++ +  RR   +
Sbjct: 315  VGRVESTTHLFLHCPSAMMVWYEVFRWLGVVLIIPPSMEVLFEVLRGSVRIKKIRRGYLM 374

Query: 245  IWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPL 66
            IW AT+W +W  +N  +F   +    ++V  IK +SW W + R   +  + Y +W  +P 
Sbjct: 375  IWHATLWCIWKAQNKALFANGTFIPKEIVEEIKVVSWKWCLARTKVSLCMFY-EWTWDPG 433

Query: 65   GCI 57
             C+
Sbjct: 434  DCL 436


>GAU26515.1 hypothetical protein TSUD_361480 [Trifolium subterraneum]
          Length = 873

 Score =  292 bits (748), Expect = 6e-87
 Identities = 153/423 (36%), Positives = 225/423 (53%), Gaps = 3/423 (0%)
 Frame = -1

Query: 1316 YKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLLA 1137
            +K P  V+K I+ IQR FLWGG+   +KI WV W+++C P+ +GGLGV++V   NLSLL 
Sbjct: 453  FKMPVLVIKKIIRIQREFLWGGVKGGRKISWVKWKEVCKPRCQGGLGVRDVGKVNLSLLI 512

Query: 1136 KWRWRFCMDSSAVWCDLLVHRYGSLVGSGRTDQQC--LQNASRWMKDLFALEVNPGESGK 963
            KWRWR      A W +LLV +YG +V        C     AS W KD+   E++  E G 
Sbjct: 513  KWRWRLLQPEGAFWKELLVAKYGEMVRQKLHWNDCPIPSRASSWWKDI--CEIDVCEEGS 570

Query: 962  WITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDW 783
            W    + R++G G ++ FW D W G   L ++FPRLF ++  KE +V E+   T     W
Sbjct: 571  WFAQHVFRRVGKGDSIRFWKDCWFGNSPLCDLFPRLFSIATHKEALVNEVRVVTEGLNLW 630

Query: 782  EWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGL-R 606
             W WRR  FVWE ++     + L  +  S   ED W W+ +    F+VKS Y +L  +  
Sbjct: 631  NWEWRRRLFVWEQELLVSLTETLPLLVLS-GEEDVWYWRLEDGGVFTVKSVYTLLGSVFA 689

Query: 605  CNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFC 426
             +    P      + IW+   PSKV +  W+LL+N++PTK +LA +G+    GS+ C+ C
Sbjct: 690  TDAVWSPPELRVFDQIWKSPAPSKVIVFPWKLLRNRIPTKANLALRGIQVVGGSLNCVHC 749

Query: 425  SRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHI 246
                E+ SHLF  C FA +VW ++  W G    +  +    F    G        +   +
Sbjct: 750  VGSGEDASHLFMYCNFAAQVWNSIFRWIGVTIVIPPNIFLLFDCMRGAAPNNKIAKGFSL 809

Query: 245  IWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPL 66
            IW  T+WV+W +RN++ F   + D+   V  IK LSW W ++R  K    L+ +WC +P 
Sbjct: 810  IWHTTLWVIWKSRNSISFGSGTIDLGQAVGEIKLLSWRWDLSR-RKIPLCLFYEWCWDPG 868

Query: 65   GCI 57
             C+
Sbjct: 869  ICL 871


>GAU25690.1 hypothetical protein TSUD_266170 [Trifolium subterraneum]
          Length = 496

 Score =  283 bits (723), Expect = 6e-87
 Identities = 154/423 (36%), Positives = 223/423 (52%), Gaps = 3/423 (0%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F K P KV K +  IQR FLWGG+   KK+ WV W  +C  KKKGGLGV++V L NLSLL
Sbjct: 74   FMKMPTKVWKQVRRIQREFLWGGVRGGKKVSWVKWSVVCKAKKKGGLGVRDVRLVNLSLL 133

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGS--LVGSGRTDQQCLQNASRWMKDLFALEVNPGESG 966
            AKWRWR  +   ++W D+L  +YG+  L     ++ +    AS W KD+  L+    ES 
Sbjct: 134  AKWRWRLLLPGRSLWKDVLAAKYGNHILHKVDWSEFRIPSFASNWWKDICTLD-KVVESK 192

Query: 965  KWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWD 786
             W+ +++ RK+GNG++  FW+  WVG   L E+FPRLF LSN K  MV +      + W 
Sbjct: 193  NWLVESVVRKVGNGNSTFFWSTTWVGEAPLLEVFPRLFSLSNHKNNMVVDFRDQQEEVWS 252

Query: 785  WEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILF-GL 609
            W + WRR  F WE ++    +  L  V  S   ED W WKPD +  FSV SAY +L   L
Sbjct: 253  WSFSWRRHLFQWELELLEHLRMVLEPVVMSLE-EDMWRWKPDPDGVFSVNSAYNLLVDDL 311

Query: 608  RCNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIF 429
                  + +     + IW+   PSKV   +W+LL +++P++ +L  +G+LG +    C+ 
Sbjct: 312  EEEDVLEEVVAVVFDQIWESPAPSKVIAFSWQLLYDRIPSRCNLEARGLLGTDVPWECVG 371

Query: 428  CSRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRH 249
            C    E+  HLF  C     VW  +  W   +  +    I+ F    G+ +    R+   
Sbjct: 372  CVGCAESSIHLFLHCPSVMMVWSDIFRWIDLVVVIPPSLISLFEVMRGSARNVKIRQGYL 431

Query: 248  IIWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNP 69
            +IW  T+W +W +RN+ IF         +V  IK LSW W + R  K    ++ +W  +P
Sbjct: 432  LIWHTTIWCIWKSRNSAIFANGLFSPKAIVEEIKVLSWKWSLAR-LKVSPCMFYEWTWDP 490

Query: 68   LGC 60
              C
Sbjct: 491  GAC 493


>GAU30230.1 hypothetical protein TSUD_67820 [Trifolium subterraneum]
          Length = 424

 Score =  279 bits (713), Expect = 2e-86
 Identities = 148/423 (34%), Positives = 227/423 (53%), Gaps = 5/423 (1%)
 Frame = -1

Query: 1301 KVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLLAKWRWR 1122
            KV K IV +QR FLWGG    K+I WVSW  IC PKK+GGLG++++ L N +LLAKWRWR
Sbjct: 4    KVWKLIVGLQRRFLWGGTGCNKRIAWVSWSNICKPKKEGGLGIRDLRLVNNALLAKWRWR 63

Query: 1121 FCMDSSAVWCDLLVHRYGSLVGS----GRTDQQCLQNASRWMKDLFALEVNPGESGKWIT 954
                   +W D+++ RYGSL  +    GR +   ++  S W  D+  L         W  
Sbjct: 64   ILTKGLGLWRDIILARYGSLFPAPHLAGRPNG--VRGVSLWWSDVSLLGTRVDSHSDWFY 121

Query: 953  DAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDWEWC 774
            + + ++IGNG++ SFW D WV    L+  +  LFQ S++    VA+MG W    W+WE  
Sbjct: 122  EGVTKRIGNGTSTSFWFDPWVDGVPLRTQYQSLFQASDQCLDRVADMGSWVTGEWEWELR 181

Query: 773  WRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILF-GLRCNV 597
            W+    + + D+     + L QV  S   ED WCW+ + +  FSVKSAY +L  G R   
Sbjct: 182  WKTDLDMQDQDLLYDLMESLRQVRFS-TTEDEWCWRHEPSGLFSVKSAYLVLEDGARLQR 240

Query: 596  PSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFCSRD 417
                +       +W     S+V + +W+LLQ+++PT+++L  + V+     ++C+FC   
Sbjct: 241  TLPVIDFVNLARVWDSWAASRVIVFSWQLLQDRVPTRQNLRRRRVMAGATDISCVFCGAV 300

Query: 416  TENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHIIWM 237
             E+  HLF +C++   +W  V+ W G      N+ +  F  F G   G   +    ++W 
Sbjct: 301  EESVDHLFVSCDWISPIWYRVSRWLGIEYVPPNNIMQVFESFFGLGVGSRVQLGLILVWH 360

Query: 236  ATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPLGCI 57
            A VW +W +RN++IF G S+ V D++  +K  SW WF+ +   +   LY +W   P+ C 
Sbjct: 361  AVVWTIWTSRNDMIFVGKSSTVDDLMDMVKLSSWKWFIGKNPDSPCSLY-EWEVQPILC- 418

Query: 56   *WS 48
             WS
Sbjct: 419  -WS 420


>GAU48210.1 hypothetical protein TSUD_404970 [Trifolium subterraneum]
          Length = 1653

 Score =  297 bits (761), Expect = 4e-86
 Identities = 160/422 (37%), Positives = 217/422 (51%), Gaps = 2/422 (0%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F+KAP  +++ +  IQR+FLWGG  + KK+ WV W++IC+ K +GGLGVKN+ LFN++LL
Sbjct: 1229 FFKAPCCILRLLERIQRSFLWGGGLEDKKLCWVKWDQICLSKDQGGLGVKNLNLFNIALL 1288

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGSLVGS--GRTDQQCLQNASRWMKDLFALEVNPGESG 966
             KW+WRF  +  A+W +LL  RYG L     G         +S W KD+  +    G   
Sbjct: 1289 NKWKWRFLTEDGALWAELLRFRYGHLPTQLMGGASFSIGAKSSTWWKDVIGM--GKGAEF 1346

Query: 965  KWITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWD 786
             W    +   +GNG N+ FWN  W G     EIFP LF    R    +AE     G+ + 
Sbjct: 1347 DWFKSNMRACVGNGVNIGFWNFKWFGNHPFSEIFPNLFAKEERPNVSIAERLGGNGEAFV 1406

Query: 785  WEWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLR 606
              W W  P    E        + L   S     +DSW W  ++   FSVKS Y  L   R
Sbjct: 1407 RHWQWSDPLSDSEHQQVAELTELLRGFSLQPGHQDSWRWILETTGLFSVKSYYNALVKSR 1466

Query: 605  CNVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFC 426
              V  D    +A N +W+ D+PSKV    WRLL  +LP + +L ++G+L     + C+FC
Sbjct: 1467 LIVELDSNVLTAINQLWKNDVPSKVLFFGWRLLLQRLPIRIALNHRGILTNPQDLPCVFC 1526

Query: 425  SRDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHI 246
            S   E+  HLFF C F   VW AV  W G        G +HF  F   +      R RH+
Sbjct: 1527 SVFYEDCVHLFFHCSFVNCVWEAVYNWIGKDYHAGAEGWSHFKVFGDMVNSTNIERVRHL 1586

Query: 245  IWMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPL 66
            IW+AT W LW  RNNVIF GA+     ++ +IKA+S  W   R G    + +S WC +PL
Sbjct: 1587 IWLATTWNLWKLRNNVIFNGATPSASSLLNDIKAISCAWVSGRYGHKSCISFSLWCFDPL 1646

Query: 65   GC 60
             C
Sbjct: 1647 AC 1648


>KYP59667.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 409

 Score =  278 bits (710), Expect = 4e-86
 Identities = 149/405 (36%), Positives = 202/405 (49%)
 Frame = -1

Query: 1271 RNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLLAKWRWRFCMDSSAVWC 1092
            R FLWGG+   KK+ W+SW+K+ +PK+KGGLGVKN+ LFN SLLAKWRW     SS++W 
Sbjct: 7    RRFLWGGVGDQKKVCWISWDKVTLPKEKGGLGVKNIILFNRSLLAKWRWNLFHQSSSMWA 66

Query: 1091 DLLVHRYGSLVGSGRTDQQCLQNASRWMKDLFALEVNPGESGKWITDAIGRKIGNGSNVS 912
             +L  RY    G     Q   Q  S W +DL  +     E   W    I  ++G GS V 
Sbjct: 67   QVLQSRYRG--GHNLCAQASSQKDSIWWRDLLMV-CGGVEEDNWFDKLIEWRVGVGSKVR 123

Query: 911  FWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDWEWCWRRPFFVWEADIFR 732
            FW D WVG   L   FPRLF  S+++   +AE+G +    W W   WRR  F WE  + +
Sbjct: 124  FWLDKWVGPTNLAVAFPRLFISSDQQLASIAEIGAFVNGEWVWHLRWRRNRFEWEIPLEQ 183

Query: 731  CFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLRCNVPSDPLFCSACNLIWQ 552
                 +     + +  DSW W  +S+  FSVKSAY I+      +    +F     LIW 
Sbjct: 184  QLLRLINSRIFNSSQCDSWSWVAESSGMFSVKSAYQIILAESVTIEDHDIF----KLIWS 239

Query: 551  CDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFCSRDTENHSHLFFTCEFAY 372
               P KV   AWRLL   LPT ++LA + +L       CIFC  D E  +H+F TC    
Sbjct: 240  IPAPPKVLFFAWRLLNRGLPTVDNLARRNILLGEHESKCIFCKVDIETTTHIFCTCPMVD 299

Query: 371  RVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHIIWMATVWVLWITRNNVIF 192
            RVW     W     P+     +HF      I+  +   + H +W+AT+W LW  RN  IF
Sbjct: 300  RVWKQCLSWLNCPAPLPRQIFDHFSFLPAPIQNESEAETWHTVWLATMWTLWRYRNKCIF 359

Query: 191  RGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPLGCI 57
             G + +   +V +I    W W ++    +    +S W SNP  CI
Sbjct: 360  VGGTFEQGSIVRDILIFCWRW-LSTLKPSFAYSFSQWSSNPGPCI 403


>KYP44023.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1034

 Score =  291 bits (746), Expect = 1e-85
 Identities = 152/422 (36%), Positives = 217/422 (51%), Gaps = 1/422 (0%)
 Frame = -1

Query: 1319 FYKAPKKVVKSIVSIQRNFLWGGLDQAKKIPWVSWEKICVPKKKGGLGVKNVELFNLSLL 1140
            F++ P  V K IVS+QRNFLWG  +  +KI W+SW+++ +PKK GGLGVKN+  FN++LL
Sbjct: 617  FFRMPASVSKEIVSLQRNFLWGCKEDQRKICWISWDRVTLPKKMGGLGVKNITRFNMALL 676

Query: 1139 AKWRWRFCMDSSAVWCDLLVHRYGSLVGSGRTDQQCLQNASRWMKDLFALEVNPG-ESGK 963
            AKWRW     + ++W  +L  RYG   G+    Q   +  S W +DL  L V  G E   
Sbjct: 677  AKWRWSLFHQNDSLWARVLYSRYGG--GTNLCAQSSSRRDSIWWRDL--LMVCGGLEQDN 732

Query: 962  WITDAIGRKIGNGSNVSFWNDLWVGTECLKEIFPRLFQLSNRKECMVAEMGRWTGDRWDW 783
            W    I  +IG+G+   FW D W G  CL  +FPRLF +S ++   + +MG WT   W W
Sbjct: 733  WFERKIKWRIGSGARARFWLDNWTGPICLASVFPRLFTISEQQNHFIQDMGSWTDSSWVW 792

Query: 782  EWCWRRPFFVWEADIFRCFQDCLMQVSPSKNVEDSWCWKPDSNNGFSVKSAYGILFGLRC 603
            +  WRR  F WE  + +     L++ SP     DSW W  + +  ++V+SAY  +     
Sbjct: 793  QLQWRRERFEWEIQLEQQLMQQLLECSPRAEQVDSWWWLGEPSGTYTVRSAYSAITS-EV 851

Query: 602  NVPSDPLFCSACNLIWQCDIPSKVSILAWRLLQNKLPTKESLANKGVLGANGSVTCIFCS 423
             V S+     A N+IW    P KV I AWR++   LPT ++LA++ +  ++    C+FC 
Sbjct: 852  VVGSNN---GAPNIIWSIPAPPKVKIFAWRMMSRGLPTVDNLASRSITISDNDALCVFCK 908

Query: 422  RDTENHSHLFFTCEFAYRVWMAVNLWSGTMGPMFNHGINHFLEFAGTIKGRARRRSRHII 243
            +D E   HLF TC    +VW     W     P+    + HF    G I    +      +
Sbjct: 909  QDIETDYHLFCTCSVVDKVWKVCLSWINCPTPLPRCILEHFNFIPGPIYQNVQVEYWRTV 968

Query: 242  WMATVWVLWITRNNVIFRGASADVIDVVANIKALSWNWFVNRGGKNRGLLYSDWCSNPLG 63
            W+ T W +W TRN   F   S     +V  I   SW W ++   K     +S WCSNP  
Sbjct: 969  WLVTTWTVWRTRNLCRFNDNSFCFDSLVKEILVHSWRW-LSSFTKTFRYTFSQWCSNPGL 1027

Query: 62   CI 57
            C+
Sbjct: 1028 CL 1029