BLASTX nr result

ID: Glycyrrhiza29_contig00022074 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00022074
         (410 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU20316.1 hypothetical protein TSUD_337970 [Trifolium subterran...    56   2e-06
GAU40777.1 hypothetical protein TSUD_26570 [Trifolium subterraneum]    55   5e-06
GAU16205.1 hypothetical protein TSUD_298370 [Trifolium subterran...    54   1e-05

>GAU20316.1 hypothetical protein TSUD_337970 [Trifolium subterraneum]
          Length = 1403

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
 Frame = +2

Query: 2    RDGIFYERNLPYRDKNNPSILHPDQILPTFLPQHTNFFSEPQXXXXXXXXXXXXXXXXAL 181
            RD +FYE   PY+  +  S  +   + P   P   + F+                     
Sbjct: 760  RDVVFYEHIFPYQTSSPSSSTNSTNLSPHPPPLLDDVFTYDSVNTNPP------------ 807

Query: 182  PDSPHLNTSPDTDVLPNSPHLNASPSPLHTNINPHHSPRP-------TRNRKPPTYLQDY 340
            P S HL   P TD +P S   ++ P   H++  P   P P       TR   PPTYLQDY
Sbjct: 808  PSSNHL---PSTDNVPPSTTTSSLPHTRHSSPVPSPPPPPPPPIRKSTRQTHPPTYLQDY 864

Query: 341  QCSLNSTTVHDSVAQS 388
             C+L S T+H S +++
Sbjct: 865  HCNLLSHTIHPSSSEA 880


>GAU40777.1 hypothetical protein TSUD_26570 [Trifolium subterraneum]
          Length = 1147

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 49/155 (31%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
 Frame = +2

Query: 2   RDGIFYERNLPYRDK----NNPS---ILHPDQILPTFL-----PQHTNFFSEPQXXXXXX 145
           RD +F+E   PY DK    N PS   +        TFL     P H    S+ Q      
Sbjct: 473 RDVVFFENVFPYCDKKHNINEPSSSRVTSDSYDDLTFLHHSHTPPHHTTSSKNQHITLTD 532

Query: 146 XXXXXXXXXXALPDSPHLNTSPDTDVLP----NSPHLNASPSPLHTNINPHHSPRPTRNR 313
                       P S  + T+  T   P    +S   N  P P+ +N N HH  +  R  
Sbjct: 533 NPQTNHPPYTPNPPSTSIQTNHPTITSPPSNLDSHQPNQIPQPI-SNTN-HHIRKSLRQS 590

Query: 314 KPPTYLQDYQCSLNSTTVHDS---VAQSSSHVRYP 409
           KPP YLQDY C+L +  +HDS     QS+S  ++P
Sbjct: 591 KPPGYLQDYHCNLLTNLLHDSSTDTLQSTSQCKFP 625


>GAU16205.1 hypothetical protein TSUD_298370 [Trifolium subterraneum]
          Length = 1029

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = +2

Query: 188 SPHLNTSPDTDVLPNSPHLNASPSPLHTNINPHHSPRPTRNRKPPTYLQDYQCSLNSTTV 367
           S H+ +S       N+    +S +  +T  N     +PTRN  PP YLQDY C+  STT+
Sbjct: 461 STHITSSTSNQPKHNTFIPTSSTTLPNTATNTIPLRKPTRNCDPPPYLQDYYCNQLSTTI 520

Query: 368 HDSVA--QSSSHVRYP 409
           HDS A  QSSS  +YP
Sbjct: 521 HDSSADIQSSSSCKYP 536


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