BLASTX nr result
ID: Glycyrrhiza29_contig00018743
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00018743
(815 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 520 e-172
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 514 e-170
YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.... 480 e-157
YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC1003... 479 e-156
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 466 e-151
YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] AC... 436 e-140
AHY33059.1 RNA polymerase beta' subunit (chloroplast) [Indigofer... 433 e-139
YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medic... 428 e-137
AJE72514.1 RNA polymerase beta'' subunit (plastid) [Medicago lup... 427 e-137
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 427 e-137
AHY33384.1 RNA polymerase beta' subunit (chloroplast) [Robinia p... 426 e-136
YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 425 e-136
AJE72656.1 RNA polymerase beta'' subunit (plastid) [Amorpha frut... 426 e-136
AJE71804.1 RNA polymerase beta'' subunit (plastid) [Amorpha cane... 426 e-136
YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 425 e-136
AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 425 e-136
XP_003606032.1 DNA-directed RNA polymerase subunit beta [Medicag... 423 e-135
AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 423 e-135
AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 423 e-135
AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 423 e-135
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 520 bits (1339), Expect = e-172
Identities = 260/260 (100%), Positives = 260/260 (100%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN
Sbjct: 758 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 817
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH
Sbjct: 818 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 877
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ
Sbjct: 878 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 937
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY
Sbjct: 938 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 997
Query: 756 RLITHNQISITKNLKNLQLD 815
RLITHNQISITKNLKNLQLD
Sbjct: 998 RLITHNQISITKNLKNLQLD 1017
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 514 bits (1324), Expect = e-170
Identities = 256/260 (98%), Positives = 259/260 (99%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN
Sbjct: 758 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 817
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH
Sbjct: 818 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 877
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIR+LLNRNKEC+
Sbjct: 878 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRILLNRNKECR 937
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQTR FNNVKYHNEIKKGINKFKKDP+IPIQNSLGPLGIALPISNFYSFY
Sbjct: 938 SLIILSSSNCFQTRPFNNVKYHNEIKKGINKFKKDPLIPIQNSLGPLGIALPISNFYSFY 997
Query: 756 RLITHNQISITKNLKNLQLD 815
RLITHNQISITKNLKNLQLD
Sbjct: 998 RLITHNQISITKNLKNLQLD 1017
>YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.1 RpoC2
(chloroplast) [Wisteria sinensis]
Length = 1367
Score = 480 bits (1235), Expect = e-157
Identities = 240/255 (94%), Positives = 247/255 (96%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN
Sbjct: 743 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 802
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSI+GISDTRIQLVRTCLVLNW+QDKKSSSI EALASFVEVSTNGLIEYFLRIDLVKSH
Sbjct: 803 GKSIQGISDTRIQLVRTCLVLNWNQDKKSSSIAEALASFVEVSTNGLIEYFLRIDLVKSH 862
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSGSGLISDNESD+ININPFYSIHS AKIQQSLSQNHGTIRMLLNRNKEC+
Sbjct: 863 TSYIRKRNDPSGSGLISDNESDQININPFYSIHSTAKIQQSLSQNHGTIRMLLNRNKECR 922
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQ R FNNVKYHN IKKGINKFKKDPII I+NSLGPLGIAL I+NFYSFY
Sbjct: 923 SLIILSSSNCFQMRPFNNVKYHNGIKKGINKFKKDPIISIKNSLGPLGIALQIANFYSFY 982
Query: 756 RLITHNQISITKNLK 800
RLITHNQISITKNL+
Sbjct: 983 RLITHNQISITKNLQ 997
>YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC10039.1 RpoC2
(chloroplast) [Wisteria floribunda]
Length = 1367
Score = 479 bits (1232), Expect = e-156
Identities = 239/255 (93%), Positives = 247/255 (96%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN
Sbjct: 743 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 802
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSI+GISDTRIQLVRTCLVLNW+QDKKSSSI EALASFVEVSTNGLIEYFLRIDLVKSH
Sbjct: 803 GKSIQGISDTRIQLVRTCLVLNWNQDKKSSSIAEALASFVEVSTNGLIEYFLRIDLVKSH 862
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSGSGLISDNE+D+ININPFYSIHS AKIQQSLSQNHGTIRMLLNRNKEC+
Sbjct: 863 TSYIRKRNDPSGSGLISDNETDQININPFYSIHSTAKIQQSLSQNHGTIRMLLNRNKECR 922
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQ R FNNVKYHN IKKGINKFKKDPII I+NSLGPLGIAL I+NFYSFY
Sbjct: 923 SLIILSSSNCFQMRPFNNVKYHNGIKKGINKFKKDPIISIKNSLGPLGIALQIANFYSFY 982
Query: 756 RLITHNQISITKNLK 800
RLITHNQISITKNL+
Sbjct: 983 RLITHNQISITKNLQ 997
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 466 bits (1200), Expect = e-151
Identities = 235/255 (92%), Positives = 241/255 (94%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NW YVQWIATTKKKYFVLVRPVILYEIPDSI+FVKLFPQDLFQERDNLELKVLNYILYGN
Sbjct: 759 NWTYVQWIATTKKKYFVLVRPVILYEIPDSIHFVKLFPQDLFQERDNLELKVLNYILYGN 818
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH
Sbjct: 819 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 878
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR D SG G ISDNESDRININPF SIHSKAKIQQS SQN GTIRMLLNRNKEC+
Sbjct: 879 TSYIRKRNDSSGLGCISDNESDRININPFLSIHSKAKIQQSRSQNQGTIRMLLNRNKECR 938
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQ R FNNVKYHN I+KGINKFKKD IIPI+NSLGPLGIAL I+NFYSFY
Sbjct: 939 SLIILSSSNCFQMRPFNNVKYHNGIRKGINKFKKDSIIPIKNSLGPLGIALQIANFYSFY 998
Query: 756 RLITHNQISITKNLK 800
R ITHNQISITKNL+
Sbjct: 999 RSITHNQISITKNLQ 1013
>YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] ACH41072.1 RNA
polymerase beta' subunit (chloroplast) [Cicer arietinum]
Length = 1376
Score = 436 bits (1122), Expect = e-140
Identities = 221/257 (85%), Positives = 233/257 (90%), Gaps = 2/257 (0%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSI+FVKLFPQDLFQERDNLEL+VLNYILYGN
Sbjct: 759 NWIYVQWIATTKKKYFVLVRPVILYEIPDSIHFVKLFPQDLFQERDNLELRVLNYILYGN 818
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQ KKSSSIEEA ASFVEVSTNGLIEYF+RIDLVKSH
Sbjct: 819 GKSIRGISDTRIQLVRTCLVLNWDQGKKSSSIEEAPASFVEVSTNGLIEYFIRIDLVKSH 878
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
SYIRKR DPSG GLI D ESDR+NINPF+SIHSK KIQQSL QNHGTIRMLLNRNKEC+
Sbjct: 879 MSYIRKRNDPSGLGLIPDKESDRVNINPFFSIHSKTKIQQSLIQNHGTIRMLLNRNKECR 938
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGPLGIALPISNFYS 749
S IILSSSNCFQ R FNNVKYHN I KKDPIIPI +NSLGPLGIAL ++N+YS
Sbjct: 939 SWIILSSSNCFQMRPFNNVKYHNGI-------KKDPIIPINNKNSLGPLGIALQVANYYS 991
Query: 750 FYRLITHNQISITKNLK 800
FYRLITHNQ+SIT NL+
Sbjct: 992 FYRLITHNQVSITNNLQ 1008
>AHY33059.1 RNA polymerase beta' subunit (chloroplast) [Indigofera tinctoria]
Length = 1376
Score = 433 bits (1113), Expect = e-139
Identities = 220/255 (86%), Positives = 229/255 (89%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWI TTKKKYFVLVRPVILYEI D IN VKLFPQDLFQERDNLELKV+NYILYGN
Sbjct: 762 NWIYVQWITTTKKKYFVLVRPVILYEIADGINLVKLFPQDLFQERDNLELKVINYILYGN 821
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEA ASFVEVSTNGLI FLRIDLVKSH
Sbjct: 822 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEARASFVEVSTNGLIGDFLRIDLVKSH 881
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
SY RKR D SGSGLISDNES NINPFYSI+SKAKIQQSLSQNHGTIRMLLNRNKEC+
Sbjct: 882 ISYFRKRNDLSGSGLISDNESHPTNINPFYSIYSKAKIQQSLSQNHGTIRMLLNRNKECR 941
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSS NCFQ FN+ KYHN IK+GINK K+DPIIPI+NSLGPLGIAL +SNF SFY
Sbjct: 942 SLIILSSYNCFQMGLFNDGKYHNGIKEGINKLKRDPIIPIKNSLGPLGIALQVSNFDSFY 1001
Query: 756 RLITHNQISITKNLK 800
LITHNQISI +N K
Sbjct: 1002 HLITHNQISINQNWK 1016
>YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medicago hybrida]
YP_009141687.1 RNA polymerase beta' subunit (chloroplast)
[Medicago papillosa] AIL56137.1 RNA polymerase beta'
subunit (chloroplast) [Medicago hybrida] AIL56212.1 RNA
polymerase beta' subunit (chloroplast) [Medicago
papillosa] AMC32363.1 RNA polymerase beta'' subunit
(chloroplast) [Medicago sativa] ANS57907.1 RNA polymerase
beta' subunit (chloroplast) [Medicago sativa]
Length = 1370
Score = 428 bits (1100), Expect = e-137
Identities = 221/262 (84%), Positives = 234/262 (89%), Gaps = 2/262 (0%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWI TTKKKYFVLVRPVILYEIPDSI+FVKLFPQDLFQERDNLELKV+NYILYGN
Sbjct: 757 NWIYVQWITTTKKKYFVLVRPVILYEIPDSIDFVKLFPQDLFQERDNLELKVVNYILYGN 816
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQ KKS+SIEEA +SFVEVSTNGLIEYFLRIDLVKS+
Sbjct: 817 GKSIRGISDTRIQLVRTCLVLNWDQGKKSTSIEEAPSSFVEVSTNGLIEYFLRIDLVKSN 876
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSG GLI+DNESDRININPF+SIHSKAKI++SLSQNHGTIRMLLNRNKEC+
Sbjct: 877 TSYIRKRNDPSGLGLIADNESDRININPFFSIHSKAKIKKSLSQNHGTIRMLLNRNKECR 936
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGPLGIALPISNFYS 749
S IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGPLGIA + NFYS
Sbjct: 937 SWIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGPLGIARQVGNFYS 989
Query: 750 FYRLITHNQISITKNLKNLQLD 815
YRLITHNQISI +KN QLD
Sbjct: 990 LYRLITHNQISI---MKNFQLD 1008
>AJE72514.1 RNA polymerase beta'' subunit (plastid) [Medicago lupulina]
Length = 1368
Score = 427 bits (1099), Expect = e-137
Identities = 219/260 (84%), Positives = 232/260 (89%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKK FVLVRPVILYEIPDSI+FVKLFPQDLFQERDNLELKV+NYILYGN
Sbjct: 757 NWIYVQWIATTKKKSFVLVRPVILYEIPDSIDFVKLFPQDLFQERDNLELKVVNYILYGN 816
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+
Sbjct: 817 GKSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSN 876
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSG GLI+DNESDRININPF+SIHSKAKIQ+SLSQNHGTIRM LNRNKEC+
Sbjct: 877 TSYIRKRNDPSGLGLIADNESDRININPFFSIHSKAKIQKSLSQNHGTIRMFLNRNKECR 936
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
S IILSSSNCFQ R FNN+KYHN I KK+P IPI NSLGPLGIA + NF+S Y
Sbjct: 937 SWIILSSSNCFQIRPFNNLKYHNGI-------KKNPKIPINNSLGPLGIARQVGNFFSLY 989
Query: 756 RLITHNQISITKNLKNLQLD 815
RLITHNQISI +KN QLD
Sbjct: 990 RLITHNQISI---MKNFQLD 1006
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 427 bits (1099), Expect = e-137
Identities = 223/262 (85%), Positives = 236/262 (90%), Gaps = 2/262 (0%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSI+F KLFP+DLFQERDNLELKV+NYILYGN
Sbjct: 760 NWIYVQWIATTKKKYFVLVRPVILYEIPDSIHFGKLFPKDLFQERDNLELKVVNYILYGN 819
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQ KKSSSIEEA ASFVEVSTNGLIEYFLRIDLVKS+
Sbjct: 820 GKSIRGISDTRIQLVRTCLVLNWDQAKKSSSIEEAPASFVEVSTNGLIEYFLRIDLVKSN 879
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSG GLI+DNESD ININPF+SIHSKAKIQQSLSQNHGTIRMLLNRNKE +
Sbjct: 880 TSYIRKRNDPSGLGLIADNESDPININPFFSIHSKAKIQQSLSQNHGTIRMLLNRNKEYR 939
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGPLGIALPISNFYS 749
S IILSSSNCFQ R FNNVK+HN I KK+PIIPI NSLGPLGIAL ++NFYS
Sbjct: 940 SWIILSSSNCFQMRPFNNVKFHNGI-------KKNPIIPINNNNSLGPLGIALQVANFYS 992
Query: 750 FYRLITHNQISITKNLKNLQLD 815
YRLITHNQI+I +KNLQLD
Sbjct: 993 LYRLITHNQIAI---IKNLQLD 1011
>AHY33384.1 RNA polymerase beta' subunit (chloroplast) [Robinia pseudoacacia]
Length = 1365
Score = 426 bits (1094), Expect = e-136
Identities = 217/255 (85%), Positives = 232/255 (90%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWI TTKKKYFVLVRPVILYEI DSIN VKLFPQDLFQERDNLE KVL+YILYGN
Sbjct: 757 NWIYVQWITTTKKKYFVLVRPVILYEIADSINLVKLFPQDLFQERDNLEFKVLHYILYGN 816
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSI+ ISDTRIQLVRTCLVLNWD+DKKSS IEEALASFVEVSTNGLI YFLR DLVKS
Sbjct: 817 GKSIQRISDTRIQLVRTCLVLNWDEDKKSSFIEEALASFVEVSTNGLIGYFLRTDLVKSC 876
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
SYIRKR DPSGS LISDNESD +INPFYSI+SK KIQQSLSQNHGTIRMLLNRNK+ +
Sbjct: 877 ISYIRKRNDPSGSELISDNESD--HINPFYSIYSKPKIQQSLSQNHGTIRMLLNRNKKYR 934
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQ FNN+K HN+IK GINKFK+DPIIPI+NSLGPLGIAL ++NFYSFY
Sbjct: 935 SLIILSSSNCFQMGPFNNLKNHNKIKVGINKFKRDPIIPIKNSLGPLGIALQVTNFYSFY 994
Query: 756 RLITHNQISITKNLK 800
LITHN+ISITKNL+
Sbjct: 995 HLITHNKISITKNLQ 1009
>YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42736.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78900.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1372
Score = 425 bits (1093), Expect = e-136
Identities = 222/255 (87%), Positives = 230/255 (90%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NW YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYGN
Sbjct: 759 NWTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYGN 818
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNW QDK+SSSIEEALASFVEVSTNGLIEYFLRI LVKSH
Sbjct: 819 GKSIRGISDTRIQLVRTCLVLNWAQDKRSSSIEEALASFVEVSTNGLIEYFLRIYLVKSH 878
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSG GLISD SDRININPF SI+SK KIQQSLSQNHGTIRMLLNRNKEC+
Sbjct: 879 TSYIRKRNDPSGLGLISD--SDRININPFLSINSKTKIQQSLSQNHGTIRMLLNRNKECR 936
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQ R FNNVK N I KKDPII I+NSLGPLGIAL I+NFYSF
Sbjct: 937 SLIILSSSNCFQMRPFNNVKDPNGI-------KKDPIIAIKNSLGPLGIALQIANFYSFS 989
Query: 756 RLITHNQISITKNLK 800
RLITHNQISITKNL+
Sbjct: 990 RLITHNQISITKNLQ 1004
>AJE72656.1 RNA polymerase beta'' subunit (plastid) [Amorpha fruticosa]
Length = 1398
Score = 426 bits (1094), Expect = e-136
Identities = 216/260 (83%), Positives = 233/260 (89%), Gaps = 1/260 (0%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWI TTKKKYFVLVRPVILYEI D IN VK FPQDLFQERDNLELKVLNYILYGN
Sbjct: 759 NWIYVQWITTTKKKYFVLVRPVILYEITDGINLVKFFPQDLFQERDNLELKVLNYILYGN 818
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDT IQLVRTCLVLNWDQDKK+SSIEEA ASFVEVSTNGLI FL+IDL KSH
Sbjct: 819 GKSIRGISDTSIQLVRTCLVLNWDQDKKNSSIEEARASFVEVSTNGLIGDFLKIDLAKSH 878
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHS-KAKIQQSLSQNHGTIRMLLNRNKEC 572
YIRKR DPSGS LIS+N+SDRININPF+SI+S K KIQQSLSQNHGTIRMLLNR KEC
Sbjct: 879 ILYIRKRNDPSGSRLISNNKSDRININPFFSIYSNKTKIQQSLSQNHGTIRMLLNRKKEC 938
Query: 573 QSLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSF 752
+SLIILSSSNCFQ FNNVKYHN +K+GIN K+DPIIPI+NSLGPLGIAL ++NFYSF
Sbjct: 939 RSLIILSSSNCFQMGPFNNVKYHNGVKEGINIIKRDPIIPIKNSLGPLGIALQVANFYSF 998
Query: 753 YRLITHNQISITKNLKNLQL 812
RLIT+NQI ITKNL+ ++L
Sbjct: 999 NRLITYNQILITKNLQLVKL 1018
>AJE71804.1 RNA polymerase beta'' subunit (plastid) [Amorpha canescens]
Length = 1398
Score = 426 bits (1094), Expect = e-136
Identities = 216/260 (83%), Positives = 233/260 (89%), Gaps = 1/260 (0%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWI TTKKKYFVLVRPVILYEI D IN VK FPQDLFQERDNLELKVLNYILYGN
Sbjct: 759 NWIYVQWITTTKKKYFVLVRPVILYEITDGINLVKFFPQDLFQERDNLELKVLNYILYGN 818
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDT IQLVRTCLVLNWDQDKK+SSIEEA ASFVEVSTNGLI FL+IDL KSH
Sbjct: 819 GKSIRGISDTSIQLVRTCLVLNWDQDKKNSSIEEARASFVEVSTNGLIGDFLKIDLAKSH 878
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHS-KAKIQQSLSQNHGTIRMLLNRNKEC 572
YIRKR DPSGS LIS+N+SDRININPF+SI+S K KIQQSLSQNHGTIRMLLNR KEC
Sbjct: 879 ILYIRKRNDPSGSRLISNNKSDRININPFFSIYSNKTKIQQSLSQNHGTIRMLLNRKKEC 938
Query: 573 QSLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSF 752
+SLIILSSSNCFQ FNNVKYHN +K+GIN K+DPIIPI+NSLGPLGIAL ++NFYSF
Sbjct: 939 RSLIILSSSNCFQMGPFNNVKYHNGVKEGINIIKRDPIIPIKNSLGPLGIALQVANFYSF 998
Query: 753 YRLITHNQISITKNLKNLQL 812
RLIT+NQI ITKNL+ ++L
Sbjct: 999 NRLITYNQILITKNLQLVKL 1018
>YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus]
AMQ99218.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus mongholicus]
Length = 1376
Score = 425 bits (1093), Expect = e-136
Identities = 222/255 (87%), Positives = 230/255 (90%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NW YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYGN
Sbjct: 763 NWTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYGN 822
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNW QDK+SSSIEEALASFVEVSTNGLIEYFLRI LVKSH
Sbjct: 823 GKSIRGISDTRIQLVRTCLVLNWAQDKRSSSIEEALASFVEVSTNGLIEYFLRIYLVKSH 882
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSG GLISD SDRININPF SI+SK KIQQSLSQNHGTIRMLLNRNKEC+
Sbjct: 883 TSYIRKRNDPSGLGLISD--SDRININPFLSINSKTKIQQSLSQNHGTIRMLLNRNKECR 940
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQ R FNNVK N I KKDPII I+NSLGPLGIAL I+NFYSF
Sbjct: 941 SLIILSSSNCFQMRPFNNVKDPNGI-------KKDPIIAIKNSLGPLGIALQIANFYSFS 993
Query: 756 RLITHNQISITKNLK 800
RLITHNQISITKNL+
Sbjct: 994 RLITHNQISITKNLQ 1008
>AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus crassicarpus]
Length = 1374
Score = 425 bits (1092), Expect = e-136
Identities = 220/255 (86%), Positives = 230/255 (90%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NW YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYGN
Sbjct: 759 NWTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYGN 818
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNW QDK+SSSIEEA ASFVEVSTNGLIEYFLRIDLVKSH
Sbjct: 819 GKSIRGISDTRIQLVRTCLVLNWAQDKRSSSIEEAFASFVEVSTNGLIEYFLRIDLVKSH 878
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSG GLISD SDRININPF SI+SK KIQQSLSQNHGTIRMLLNRNKEC+
Sbjct: 879 TSYIRKRNDPSGLGLISD--SDRININPFLSINSKTKIQQSLSQNHGTIRMLLNRNKECR 936
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQ + FNNVK N I K KKDPII I+NSLGP+GIAL I+NFYSF
Sbjct: 937 SLIILSSSNCFQMKPFNNVKDPNGI-----KIKKDPIIAIKNSLGPVGIALQIANFYSFS 991
Query: 756 RLITHNQISITKNLK 800
RLITHNQIS TKNL+
Sbjct: 992 RLITHNQISRTKNLQ 1006
>XP_003606032.1 DNA-directed RNA polymerase subunit beta [Medicago truncatula]
AES88229.1 DNA-directed RNA polymerase subunit beta
[Medicago truncatula]
Length = 1368
Score = 423 bits (1087), Expect = e-135
Identities = 218/262 (83%), Positives = 232/262 (88%), Gaps = 2/262 (0%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSI+F+KLFPQDLFQERDNLELKV+NYILYGN
Sbjct: 761 NWIYVQWIATTKKKYFVLVRPVILYEIPDSIDFIKLFPQDLFQERDNLELKVVNYILYGN 820
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+
Sbjct: 821 GKSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSN 880
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
T+YIRKR DPSG GLI+DNESDRININPF+SIH KAKI++SLSQNHGTIRMLLNRNKEC+
Sbjct: 881 TAYIRKRNDPSGLGLIADNESDRININPFFSIHYKAKIKKSLSQNHGTIRMLLNRNKECR 940
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGPLGIALPISNFYS 749
S IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGPLGIA + NFYS
Sbjct: 941 SWIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGPLGIARQVGNFYS 993
Query: 750 FYRLITHNQISITKNLKNLQLD 815
Y LITHNQISI +KN QLD
Sbjct: 994 LYHLITHNQISI---MKNFQLD 1012
>AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
Length = 1370
Score = 423 bits (1087), Expect = e-135
Identities = 218/262 (83%), Positives = 232/262 (88%), Gaps = 2/262 (0%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSI+F+KLFPQDLFQERDNLELKV+NYILYGN
Sbjct: 757 NWIYVQWIATTKKKYFVLVRPVILYEIPDSIDFIKLFPQDLFQERDNLELKVVNYILYGN 816
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+
Sbjct: 817 GKSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSN 876
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
T+YIRKR DPSG GLI+DNESDRININPF+SIH KAKI++SLSQNHGTIRMLLNRNKEC+
Sbjct: 877 TAYIRKRNDPSGLGLIADNESDRININPFFSIHYKAKIKKSLSQNHGTIRMLLNRNKECR 936
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGPLGIALPISNFYS 749
S IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGPLGIA + NFYS
Sbjct: 937 SWIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGPLGIARQVGNFYS 989
Query: 750 FYRLITHNQISITKNLKNLQLD 815
Y LITHNQISI +KN QLD
Sbjct: 990 LYHLITHNQISI---MKNFQLD 1008
>AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
AFR60049.1 RNA polymerase beta'' subunit (plastid)
[Medicago truncatula]
Length = 1370
Score = 423 bits (1087), Expect = e-135
Identities = 218/262 (83%), Positives = 232/262 (88%), Gaps = 2/262 (0%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NWIYVQWIATTKKKYFVLVRPVILYEIPDSI+F+KLFPQDLFQERDNLELKV+NYILYGN
Sbjct: 757 NWIYVQWIATTKKKYFVLVRPVILYEIPDSIDFIKLFPQDLFQERDNLELKVVNYILYGN 816
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNWDQ KKS SIEEA +SFVEVSTNGLIEYFLRIDLVKS+
Sbjct: 817 GKSIRGISDTRIQLVRTCLVLNWDQGKKSPSIEEAPSSFVEVSTNGLIEYFLRIDLVKSN 876
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
T+YIRKR DPSG GLI+DNESDRININPF+SIH KAKI++SLSQNHGTIRMLLNRNKEC+
Sbjct: 877 TAYIRKRNDPSGLGLIADNESDRININPFFSIHYKAKIKKSLSQNHGTIRMLLNRNKECR 936
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPI--QNSLGPLGIALPISNFYS 749
S IILSSSNCFQ R FNNVKYHN I KK+P IPI NSLGPLGIA + NFYS
Sbjct: 937 SWIILSSSNCFQIRPFNNVKYHNGI-------KKNPKIPINNNNSLGPLGIARQVGNFYS 989
Query: 750 FYRLITHNQISITKNLKNLQLD 815
Y LITHNQISI +KN QLD
Sbjct: 990 LYHLITHNQISI---MKNFQLD 1008
>AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus canadensis]
Length = 1372
Score = 423 bits (1087), Expect = e-135
Identities = 220/255 (86%), Positives = 230/255 (90%)
Frame = +3
Query: 36 NWIYVQWIATTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQERDNLELKVLNYILYGN 215
NW YVQWI TTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQE+DNLELKV+NYILYGN
Sbjct: 759 NWTYVQWITTTKKKYFVLVRPVILYEIPDSINFVKLFPQDLFQEKDNLELKVINYILYGN 818
Query: 216 GKSIRGISDTRIQLVRTCLVLNWDQDKKSSSIEEALASFVEVSTNGLIEYFLRIDLVKSH 395
GKSIRGISDTRIQLVRTCLVLNW QDK+SSSIEEALASFVEVSTNGLIEYFLRI LVKSH
Sbjct: 819 GKSIRGISDTRIQLVRTCLVLNWAQDKRSSSIEEALASFVEVSTNGLIEYFLRIYLVKSH 878
Query: 396 TSYIRKRKDPSGSGLISDNESDRININPFYSIHSKAKIQQSLSQNHGTIRMLLNRNKECQ 575
TSYIRKR DPSG GLISD SDRININPF SI+SK KIQQSLSQNHGTIRMLLNRNKEC+
Sbjct: 879 TSYIRKRNDPSGLGLISD--SDRININPFLSINSKTKIQQSLSQNHGTIRMLLNRNKECR 936
Query: 576 SLIILSSSNCFQTRSFNNVKYHNEIKKGINKFKKDPIIPIQNSLGPLGIALPISNFYSFY 755
SLIILSSSNCFQ + FNNVK N I KKDPII I+NSLGP+GIAL I+NFYSF
Sbjct: 937 SLIILSSSNCFQMKPFNNVKDPNVI-------KKDPIIAIKNSLGPVGIALQIANFYSFS 989
Query: 756 RLITHNQISITKNLK 800
RLITHNQISITKNL+
Sbjct: 990 RLITHNQISITKNLQ 1004