BLASTX nr result
ID: Glycyrrhiza29_contig00018389
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00018389
(514 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 347 e-108
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 343 e-107
XP_013459648.1 DNA-directed RNA polymerase subunit beta [Medicag... 291 1e-96
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 305 2e-93
AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 304 5e-93
AJE72585.1 RNA polymerase beta'' subunit (plastid) [Trifolium re... 301 3e-92
YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 300 9e-92
AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 300 9e-92
YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 300 9e-92
AIJ28040.1 RNA polymerase beta' subunit (chloroplast) [Trifolium... 299 3e-91
YP_009027184.1 RNA polymerase beta' subunit [Trifolium repens] A... 298 8e-91
AHY33059.1 RNA polymerase beta' subunit (chloroplast) [Indigofer... 298 8e-91
AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis la... 297 1e-90
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 297 2e-90
AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago... 294 2e-89
YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medi... 293 3e-89
AIJ28182.1 RNA polymerase beta' subunit (chloroplast) [Trifolium... 293 5e-89
XP_003606032.1 DNA-directed RNA polymerase subunit beta [Medicag... 291 2e-88
AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 291 2e-88
AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 291 2e-88
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 347 bits (890), Expect = e-108
Identities = 171/171 (100%), Positives = 171/171 (100%)
Frame = +2
Query: 2 ESRITNYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMSPS 181
ESRITNYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMSPS
Sbjct: 534 ESRITNYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMSPS 593
Query: 182 GVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKELK 361
GVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKELK
Sbjct: 594 GVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKELK 653
Query: 362 PKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
PKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL
Sbjct: 654 PKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 704
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 343 bits (879), Expect = e-107
Identities = 169/171 (98%), Positives = 170/171 (99%)
Frame = +2
Query: 2 ESRITNYSIFNQIKDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMSPS 181
ESRIT+YSIFNQI DHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMSPS
Sbjct: 534 ESRITDYSIFNQIMDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMSPS 593
Query: 182 GVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKELK 361
GVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKELK
Sbjct: 594 GVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKELK 653
Query: 362 PKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
PKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL
Sbjct: 654 PKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 704
>XP_013459648.1 DNA-directed RNA polymerase subunit beta [Medicago truncatula]
KEH33679.1 DNA-directed RNA polymerase subunit beta
[Medicago truncatula]
Length = 329
Score = 291 bits (745), Expect = 1e-96
Identities = 147/173 (84%), Positives = 155/173 (89%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF QSIQERKNELM
Sbjct: 87 EKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF--QSIQERKNELMR 144
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRT+GIHS+FQKED IEYRGIKE
Sbjct: 145 PFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTVGIHSVFQKEDFIEYRGIKE 204
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 205 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 257
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 305 bits (781), Expect = 2e-93
Identities = 153/173 (88%), Positives = 159/173 (91%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E IT+YSIFN+I DHCH MYPAIFHDT LLAKRRRNRF+IPFP Q IQERKNELM
Sbjct: 534 ERGITDYSIFNKIICTDHCHLMYPAIFHDTFSLLAKRRRNRFLIPFPFQPIQERKNELMP 593
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVSIEIPINGIF RNSIFAYFDDPQYRRQSSGITKYRTIGI+SIFQKEDLIEYRGIKE
Sbjct: 594 PSGVSIEIPINGIFQRNSIFAYFDDPQYRRQSSGITKYRTIGINSIFQKEDLIEYRGIKE 653
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIRSRVGGL
Sbjct: 654 LKPKSQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIRSRVGGL 706
>AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus canadensis]
Length = 1372
Score = 304 bits (778), Expect = 5e-93
Identities = 154/173 (89%), Positives = 157/173 (90%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E RITNYSIFNQI DH H MYPAIFHDT LAKRRRNRF+IPFP QSIQERKNEL
Sbjct: 534 ERRITNYSIFNQILCMDHRHLMYPAIFHDTFSFLAKRRRNRFLIPFPFQSIQERKNELTP 593
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGI SIFQKEDLIEYRGIKE
Sbjct: 594 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIQSIFQKEDLIEYRGIKE 653
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIRSRV GL
Sbjct: 654 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIRSRVRGL 706
>AJE72585.1 RNA polymerase beta'' subunit (plastid) [Trifolium repens]
Length = 1368
Score = 301 bits (772), Expect = 3e-92
Identities = 150/173 (86%), Positives = 157/173 (90%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSIFNQ DH HFMYPAIFHDT +LLAKRRRNRF+IPFP QSIQERKNEL+
Sbjct: 535 EKGISNYSIFNQTICTDHSHFMYPAIFHDTFNLLAKRRRNRFLIPFPFQSIQERKNELIP 594
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVS+EIPINGIFH NSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKED IEY GIKE
Sbjct: 595 PSGVSVEIPINGIFHSNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDFIEYGGIKE 654
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 655 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 707
>YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42736.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78900.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1372
Score = 300 bits (769), Expect = 9e-92
Identities = 153/175 (87%), Positives = 159/175 (90%), Gaps = 4/175 (2%)
Frame = +2
Query: 2 ESRITNYSIFNQIK----DHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNEL 169
E RIT+YSIFNQI+ DHCH MYPA+FHDT LAKRRRNRF+IPF QSIQERKNEL
Sbjct: 534 ERRITDYSIFNQIQILCMDHCHLMYPALFHDTFSFLAKRRRNRFLIPF--QSIQERKNEL 591
Query: 170 MSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGI 349
M PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGI SIFQKEDLIEYRGI
Sbjct: 592 MRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIQSIFQKEDLIEYRGI 651
Query: 350 KELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
KELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIRSRV GL
Sbjct: 652 KELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIRSRVRGL 706
>AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus crassicarpus]
Length = 1374
Score = 300 bits (769), Expect = 9e-92
Identities = 152/173 (87%), Positives = 157/173 (90%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E RIT+YSIFNQI DH H MYPAIFHDT LAKRRRNRF+IPFP QSIQERKNEL
Sbjct: 534 ERRITDYSIFNQILCMDHRHLMYPAIFHDTFSFLAKRRRNRFLIPFPFQSIQERKNELTP 593
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGI SIFQKEDLIEYRGI+E
Sbjct: 594 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIQSIFQKEDLIEYRGIQE 653
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIRSRV GL
Sbjct: 654 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIRSRVRGL 706
>YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus]
AMQ99218.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus mongholicus]
Length = 1376
Score = 300 bits (769), Expect = 9e-92
Identities = 153/175 (87%), Positives = 159/175 (90%), Gaps = 4/175 (2%)
Frame = +2
Query: 2 ESRITNYSIFNQIK----DHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNEL 169
E RIT+YSIFNQI+ DHCH MYPA+FHDT LAKRRRNRF+IPF QSIQERKNEL
Sbjct: 538 ERRITDYSIFNQIQILCMDHCHLMYPALFHDTFSFLAKRRRNRFLIPF--QSIQERKNEL 595
Query: 170 MSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGI 349
M PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGI SIFQKEDLIEYRGI
Sbjct: 596 MRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIQSIFQKEDLIEYRGI 655
Query: 350 KELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
KELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIRSRV GL
Sbjct: 656 KELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIRSRVRGL 710
>AIJ28040.1 RNA polymerase beta' subunit (chloroplast) [Trifolium lupinaster]
Length = 1367
Score = 299 bits (765), Expect = 3e-91
Identities = 149/173 (86%), Positives = 156/173 (90%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I++YS+FNQ DH H MYPAIFHD +LLAKRRRNRF+IPFP QSIQERKNELM
Sbjct: 534 EKGISDYSLFNQTICTDHSHLMYPAIFHDIFNLLAKRRRNRFLIPFPFQSIQERKNELMP 593
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSI QKED IEYRGIKE
Sbjct: 594 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSILQKEDFIEYRGIKE 653
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 654 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 706
>YP_009027184.1 RNA polymerase beta' subunit [Trifolium repens] AGO63611.1 RNA
polymerase beta' subunit (plastid) [Trifolium repens]
Length = 1368
Score = 298 bits (762), Expect = 8e-91
Identities = 149/173 (86%), Positives = 156/173 (90%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSIFNQ DH HFMYPAIFHDT +LLAKRRRNRF+IPFP QSIQERKNEL+
Sbjct: 535 EKGISNYSIFNQTICTDHSHFMYPAIFHDTFNLLAKRRRNRFLIPFPFQSIQERKNELIP 594
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
SGVS+EIPINGIFH NSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKED IEY GIKE
Sbjct: 595 LSGVSVEIPINGIFHSNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDFIEYGGIKE 654
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 655 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 707
>AHY33059.1 RNA polymerase beta' subunit (chloroplast) [Indigofera tinctoria]
Length = 1376
Score = 298 bits (762), Expect = 8e-91
Identities = 149/174 (85%), Positives = 158/174 (90%), Gaps = 3/174 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E RI +YS+FNQI DHCHF++PAIFHDTSDLLAKRRRNRFIIPFP QSIQER ELM
Sbjct: 534 ERRIPDYSVFNQILCMDHCHFIHPAIFHDTSDLLAKRRRNRFIIPFPFQSIQERDKELMF 593
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKED-LIEYRGIK 352
PSG+SIEIPINGIF RNSI AYFDDPQYR QSSGITKYRTIGIHSI +KED LIEYRG+K
Sbjct: 594 PSGISIEIPINGIFRRNSILAYFDDPQYRTQSSGITKYRTIGIHSILKKEDFLIEYRGVK 653
Query: 353 ELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
E KPK QIKVDRFFFIPEEVHILPESSSIMVRNNSI+G+DTPITLNIRSRVGGL
Sbjct: 654 EFKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSIVGVDTPITLNIRSRVGGL 707
>AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis lambertii]
Length = 1368
Score = 297 bits (761), Expect = 1e-90
Identities = 152/173 (87%), Positives = 157/173 (90%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E +IT+YSIFNQI DHCH MYPAIFHDT LAKRRRNRF+IPF QSIQERKNEL
Sbjct: 534 ERKITDYSIFNQILCMDHCHLMYPAIFHDTFSFLAKRRRNRFLIPF--QSIQERKNELTP 591
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVSIEIPINGIFHRNSIFA FDDPQYRRQSSGITKYRTIGI SIFQKEDLIEYRGIKE
Sbjct: 592 PSGVSIEIPINGIFHRNSIFASFDDPQYRRQSSGITKYRTIGIQSIFQKEDLIEYRGIKE 651
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPITLNIRSRVGGL
Sbjct: 652 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITLNIRSRVGGL 704
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 297 bits (760), Expect = 2e-90
Identities = 149/173 (86%), Positives = 155/173 (89%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPFP SIQERKNELM
Sbjct: 534 EKGISNYSILNQMICMDHSHLMYPAIFHDTFYLLAKRRRNRFLIPFPFHSIQERKNELMP 593
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRTIGI SIFQKED IEYRGIKE
Sbjct: 594 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTIGIQSIFQKEDFIEYRGIKE 653
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 654 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 706
>AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 1370
Score = 294 bits (752), Expect = 2e-89
Identities = 149/173 (86%), Positives = 156/173 (90%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF QSIQERKNELM
Sbjct: 534 EKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF--QSIQERKNELMR 591
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRTIGIHS+FQKED IEYRGIKE
Sbjct: 592 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTIGIHSVFQKEDFIEYRGIKE 651
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 652 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 704
>YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medicago falcata]
AOG66214.1 RNA polymerase beta'' subunit (chloroplast)
[Medicago sativa] APC60490.1 RNA polymerase beta''
subunit (chloroplast) [Medicago falcata]
Length = 1374
Score = 293 bits (751), Expect = 3e-89
Identities = 150/173 (86%), Positives = 156/173 (90%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSIFNQI DH H M PAIFHDT LLAKRRRNRF+IPF QSIQERKNELM
Sbjct: 538 EKGISNYSIFNQIICTDHSHLMDPAIFHDTFYLLAKRRRNRFLIPF--QSIQERKNELMR 595
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRTIGIHS+FQKED IEYRGIKE
Sbjct: 596 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTIGIHSVFQKEDFIEYRGIKE 655
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 656 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 708
>AIJ28182.1 RNA polymerase beta' subunit (chloroplast) [Trifolium occidentale]
Length = 1368
Score = 293 bits (749), Expect = 5e-89
Identities = 146/173 (84%), Positives = 154/173 (89%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+N SIFNQ DH HFMYPAIFHDT +LLAKRRRNRF+IPFP QSIQERKNEL+
Sbjct: 535 EKGISNDSIFNQTICTDHSHFMYPAIFHDTFNLLAKRRRNRFLIPFPFQSIQERKNELIP 594
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
PSGVS+EIPINGIFH NSIFAYFDDPQYRRQ SGITKYRTIGIHSIFQKED IEY G KE
Sbjct: 595 PSGVSVEIPINGIFHSNSIFAYFDDPQYRRQGSGITKYRTIGIHSIFQKEDFIEYGGSKE 654
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVD+FFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 655 LKPKSQIKVDQFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 707
>XP_003606032.1 DNA-directed RNA polymerase subunit beta [Medicago truncatula]
AES88229.1 DNA-directed RNA polymerase subunit beta
[Medicago truncatula]
Length = 1368
Score = 291 bits (745), Expect = 2e-88
Identities = 147/173 (84%), Positives = 155/173 (89%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF QSIQERKNELM
Sbjct: 538 EKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF--QSIQERKNELMR 595
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRT+GIHS+FQKED IEYRGIKE
Sbjct: 596 PFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTVGIHSVFQKEDFIEYRGIKE 655
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 656 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 708
>AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
Length = 1370
Score = 291 bits (745), Expect = 2e-88
Identities = 147/173 (84%), Positives = 155/173 (89%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF QSIQERKNELM
Sbjct: 534 EKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF--QSIQERKNELMR 591
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRT+GIHS+FQKED IEYRGIKE
Sbjct: 592 PFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTVGIHSVFQKEDFIEYRGIKE 651
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 652 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 704
>AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
AFR60049.1 RNA polymerase beta'' subunit (plastid)
[Medicago truncatula]
Length = 1370
Score = 291 bits (745), Expect = 2e-88
Identities = 147/173 (84%), Positives = 155/173 (89%), Gaps = 2/173 (1%)
Frame = +2
Query: 2 ESRITNYSIFNQI--KDHCHFMYPAIFHDTSDLLAKRRRNRFIIPFPLQSIQERKNELMS 175
E I+NYSI NQ+ DH H MYPAIFHDT LLAKRRRNRF+IPF QSIQERKNELM
Sbjct: 534 EKGISNYSILNQMICTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF--QSIQERKNELMR 591
Query: 176 PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGITKYRTIGIHSIFQKEDLIEYRGIKE 355
P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+SGITKYRT+GIHS+FQKED IEYRGIKE
Sbjct: 592 PFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTVGIHSVFQKEDFIEYRGIKE 651
Query: 356 LKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGL 514
LKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL
Sbjct: 652 LKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 704