BLASTX nr result
ID: Glycyrrhiza29_contig00016613
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00016613
(403 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_003605674.2 replication factor-A carboxy-terminal domain prot... 58 1e-16
XP_007134592.1 hypothetical protein PHAVU_010G0596000g, partial ... 56 1e-15
GAU50408.1 hypothetical protein TSUD_244550 [Trifolium subterran... 54 6e-15
XP_003600272.2 replication factor-A carboxy-terminal domain prot... 54 2e-14
XP_003600269.1 DUF223 domain protein [Medicago truncatula] AES70... 54 2e-14
XP_007146146.1 hypothetical protein PHAVU_006G016100g [Phaseolus... 53 4e-13
XP_003595510.1 replication factor-A carboxy-terminal domain prot... 51 8e-13
GAU12842.1 hypothetical protein TSUD_73290 [Trifolium subterraneum] 51 2e-12
GAU51186.1 hypothetical protein TSUD_412120 [Trifolium subterran... 55 2e-12
XP_007161930.1 hypothetical protein PHAVU_001G109800g [Phaseolus... 50 2e-12
KHN37149.1 hypothetical protein glysoja_038769, partial [Glycine... 50 2e-12
XP_013450612.1 animal RPA1 domain protein [Medicago truncatula] ... 53 3e-12
AFK36314.1 unknown [Lotus japonicus] 50 2e-11
KHN32534.1 hypothetical protein glysoja_047895, partial [Glycine... 53 3e-11
KRH45393.1 hypothetical protein GLYMA_08G268800 [Glycine max] 49 3e-11
XP_003593181.2 replication factor-A carboxy-terminal domain prot... 49 9e-11
XP_013446466.1 replication factor-A carboxy-terminal domain prot... 49 9e-11
XP_003613114.1 PIF1 DNA helicase/replication A1-like protein, pu... 47 4e-10
XP_014626114.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 49 4e-10
XP_007144285.1 hypothetical protein PHAVU_007G143500g [Phaseolus... 47 6e-10
>XP_003605674.2 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] AES87871.2 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 560
Score = 58.2 bits (139), Expect(2) = 1e-16
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 86 MVLPIIPISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
M L PIS+IS+S+ W+I RVV LW VSDF ++ +PFSIEMVLM
Sbjct: 1 MALTFEPISQISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLM 47
Score = 55.5 bits (132), Expect(2) = 1e-16
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +3
Query: 237 RIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
RIHAS+K+TL+YKF ++EG VYSF+ + VAAN G Y+T
Sbjct: 53 RIHASIKKTLLYKFQSEIREGKVYSFENMGVAANGGSYKT 92
>XP_007134592.1 hypothetical protein PHAVU_010G0596000g, partial [Phaseolus
vulgaris] ESW06586.1 hypothetical protein
PHAVU_010G0596000g, partial [Phaseolus vulgaris]
Length = 113
Score = 55.8 bits (133), Expect(2) = 1e-15
Identities = 22/39 (56%), Positives = 33/39 (84%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVL 223
+++++ S+ETW+++ RV+ LW V DFTK KIPFS+EMVL
Sbjct: 7 LNDVNLSKETWNVVVRVLRLWCVQDFTKQKIPFSLEMVL 45
Score = 54.3 bits (129), Expect(2) = 1e-15
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +3
Query: 237 RIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
RIHASV+RTL+YKF + E VYS Q TVA+N+G YRT
Sbjct: 52 RIHASVRRTLIYKFQNQICEDRVYSIQSFTVASNLGSYRT 91
>GAU50408.1 hypothetical protein TSUD_244550 [Trifolium subterraneum]
Length = 340
Score = 54.3 bits (129), Expect(2) = 6e-15
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRIHA+V+RTL+YKF K +KE +V++ VAAN+G YRT
Sbjct: 52 DRIHATVRRTLIYKFEKDLKEDTVFAISNFGVAANIGSYRT 92
Score = 53.5 bits (127), Expect(2) = 6e-15
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
ISEIS ++E W++I RVV LW V D + K+PFS+EMVLM
Sbjct: 8 ISEISPAKENWNLIVRVVRLWYVKDMARDKLPFSMEMVLM 47
>XP_003600272.2 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] AES70523.2 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 719
Score = 53.9 bits (128), Expect(2) = 2e-14
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 237 RIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
RIHAS+K+TL YKF ++EG VYSF+ + VAAN G Y+T
Sbjct: 53 RIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKT 92
Score = 52.0 bits (123), Expect(2) = 2e-14
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 86 MVLPIIPISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
M L PIS+IS+S+ +I RVV LW +SDF ++ +PFSIEMVLM
Sbjct: 1 MALTFEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLM 47
>XP_003600269.1 DUF223 domain protein [Medicago truncatula] AES70520.1 DUF223
domain protein [Medicago truncatula]
Length = 323
Score = 53.9 bits (128), Expect(2) = 2e-14
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 237 RIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
RIHAS+K+TL YKF ++EG VYSF+ + VAAN G Y+T
Sbjct: 53 RIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKT 92
Score = 52.0 bits (123), Expect(2) = 2e-14
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 86 MVLPIIPISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
M L PIS+IS+S+ +I RVV LW +SDF ++ +PFSIEMVLM
Sbjct: 1 MALTFEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLM 47
>XP_007146146.1 hypothetical protein PHAVU_006G016100g [Phaseolus vulgaris]
ESW18140.1 hypothetical protein PHAVU_006G016100g
[Phaseolus vulgaris]
Length = 425
Score = 52.8 bits (125), Expect(2) = 4e-13
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3
Query: 237 RIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
RIH S++RTL+YKF + +GSVYS Q +VAAN G Y+T
Sbjct: 58 RIHGSIRRTLIYKFQSQIYDGSVYSVQSFSVAANGGSYKT 97
Score = 48.9 bits (115), Expect(2) = 4e-13
Identities = 18/39 (46%), Positives = 31/39 (79%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVL 223
+ ++++++E W+I+ RV+ LW V+D K KIPFSIE++L
Sbjct: 13 VIDVTSAKENWNIVVRVIRLWFVTDLAKSKIPFSIELIL 51
>XP_003595510.1 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] AES65761.1 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 549
Score = 50.8 bits (120), Expect(2) = 8e-13
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRI+ASV+RTL+YK+ K ++E V+S +VA+NVG YRT
Sbjct: 52 DRINASVRRTLIYKYEKELREDRVFSIGNFSVASNVGSYRT 92
Score = 49.7 bits (117), Expect(2) = 8e-13
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
IS+IS S+E W+I RVV LW V D K ++P+S+EMVLM
Sbjct: 8 ISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLM 47
>GAU12842.1 hypothetical protein TSUD_73290 [Trifolium subterraneum]
Length = 639
Score = 50.8 bits (120), Expect(2) = 2e-12
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLMH 229
ISEI++ + TW+ +++ LW VSDF ++ +PFSIEMVLM+
Sbjct: 14 ISEINSDKATWNFKAKIIRLWQVSDFNRNTLPFSIEMVLMN 54
Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +3
Query: 237 RIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
RIHA++K+TL+YKF + EG VY F+ L V+ N G YRT
Sbjct: 59 RIHATIKKTLIYKFKNDLIEGKVYCFENLGVSTNGGAYRT 98
>GAU51186.1 hypothetical protein TSUD_412120 [Trifolium subterraneum]
Length = 370
Score = 55.5 bits (132), Expect(2) = 2e-12
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRIHA+V+R+L+YKF +KEG +Y+F VA N+G+YRT
Sbjct: 52 DRIHATVRRSLIYKFENDMKEGEIYNFTNFGVATNIGEYRT 92
Score = 43.9 bits (102), Expect(2) = 2e-12
Identities = 16/40 (40%), Positives = 32/40 (80%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
I+ +++++E+W+++ RVV LW V + +K+PFS+EMV++
Sbjct: 8 IASVNSNKESWNLMVRVVRLWYVKNLGSNKLPFSMEMVMV 47
>XP_007161930.1 hypothetical protein PHAVU_001G109800g [Phaseolus vulgaris]
ESW33924.1 hypothetical protein PHAVU_001G109800g
[Phaseolus vulgaris]
Length = 472
Score = 50.1 bits (118), Expect(2) = 2e-12
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRIH SV++TL+YKF + E VYSF +VA N G YRT
Sbjct: 55 DRIHVSVRKTLIYKFQNHIFEDKVYSFNFFSVATNSGSYRT 95
Score = 48.9 bits (115), Expect(2) = 2e-12
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVL 223
I +I+ E W +I RV+ LW VSDF K+K PFS+EMV+
Sbjct: 11 IKDINPESENWILIARVIRLWFVSDFKKNKFPFSMEMVI 49
>KHN37149.1 hypothetical protein glysoja_038769, partial [Glycine soja]
Length = 131
Score = 50.1 bits (118), Expect(2) = 2e-12
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRIH VKRTL+YKF K ++EG VYS Q V N G YRT
Sbjct: 59 DRIHGFVKRTLIYKFEKSLQEGKVYSVQFFGVTDNGGIYRT 99
Score = 48.9 bits (115), Expect(2) = 2e-12
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 6/46 (13%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKH------KIPFSIEMVLM 226
+SEI+ +E+W I+ RVVCLW+VS+ + H KIP S+EMVL+
Sbjct: 9 VSEINVEKESWRIMVRVVCLWMVSNVSTHKQTYASKIPLSMEMVLV 54
>XP_013450612.1 animal RPA1 domain protein [Medicago truncatula] KEH24640.1 animal
RPA1 domain protein [Medicago truncatula]
Length = 258
Score = 52.8 bits (125), Expect(2) = 3e-12
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
++IHA+V+RTL+YKF K ++EG VYS VAAN+G YRT
Sbjct: 46 NKIHATVRRTLIYKFEKDLQEGKVYSMSCFGVAANLGSYRT 86
Score = 45.8 bits (107), Expect(2) = 3e-12
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEM 217
ISEIS +E+WSI+ R+VC W V D + PFS++M
Sbjct: 8 ISEISPVKESWSIVVRIVCAWFVRDVNRDAHPFSLDM 44
>AFK36314.1 unknown [Lotus japonicus]
Length = 242
Score = 50.1 bits (118), Expect(2) = 2e-11
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = +2
Query: 86 MVLPIIPISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
M + + +S+++ S++TW+I+ +VV LWV F+ K+PFS+E+VLM
Sbjct: 1 MAIKVDDVSDVNNSKDTWNIVTKVVRLWVSPSFSGGKLPFSMELVLM 47
Score = 45.8 bits (107), Expect(2) = 2e-11
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +3
Query: 237 RIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
+IHASV++TLVY+F L+ EG VY V N+GD+RT
Sbjct: 53 QIHASVRKTLVYRFHPLLTEGRVYQISYFGVGDNLGDFRT 92
>KHN32534.1 hypothetical protein glysoja_047895, partial [Glycine soja]
Length = 180
Score = 53.1 bits (126), Expect(2) = 3e-11
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRTN 359
DRIH +VKRTLVYKF +K+G YSF + VA+N G ++TN
Sbjct: 48 DRIHTTVKRTLVYKFQNEIKKGKCYSFHLVGVASNTGGFKTN 89
Score = 42.4 bits (98), Expect(2) = 3e-11
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVL 223
+ EI A+RE W + RVV LW+V +F K+ S+EMVL
Sbjct: 8 VVEIDATRENWKLCVRVVRLWLVPNFKNKKLSHSLEMVL 46
>KRH45393.1 hypothetical protein GLYMA_08G268800 [Glycine max]
Length = 199
Score = 48.5 bits (114), Expect(2) = 3e-11
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 6/44 (13%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKH------KIPFSIEMV 220
+SEI+A +E+W I+ RVVCLW+VS+ + H KIP S+EMV
Sbjct: 8 VSEINAEKESWRIMVRVVCLWMVSNVSTHKQTYASKIPLSMEMV 51
Score = 46.6 bits (109), Expect(2) = 3e-11
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRIH VKRTL+YKF K ++EG VYS Q V G YRT
Sbjct: 58 DRIHGFVKRTLIYKFEKSLQEGKVYSVQFFGVTDIGGIYRT 98
>XP_003593181.2 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] AES63432.2 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 555
Score = 49.3 bits (116), Expect(2) = 9e-11
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRIHAS+K+TL+YKF + EG +SF+ + VA N G YRT
Sbjct: 54 DRIHASLKKTLIYKFRNDLFEGKCFSFENMGVANNGGGYRT 94
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
ISEI + W++ +++ LW VSDF +++PFSIEMV++
Sbjct: 10 ISEICTEKTFWNLKGKIIRLWQVSDFNGNRMPFSIEMVIL 49
>XP_013446466.1 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] KEH20493.1 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 555
Score = 49.3 bits (116), Expect(2) = 9e-11
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRIHAS+K+TL+YKF + EG +SF+ + VA N G YRT
Sbjct: 54 DRIHASLKKTLIYKFRNDLFEGKCFSFENMGVANNGGGYRT 94
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
ISEI + W++ +++ LW VSDF +++PFSIEMV++
Sbjct: 10 ISEICTEKTFWNLKGKIIRLWQVSDFNGNRMPFSIEMVIL 49
>XP_003613114.1 PIF1 DNA helicase/replication A1-like protein, putative [Medicago
truncatula] AES96072.1 PIF1 DNA helicase/replication
A1-like protein, putative [Medicago truncatula]
Length = 96
Score = 47.4 bits (111), Expect(2) = 4e-10
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVLM 226
IS+IS S+E +II RVV LW V D K + PFS+EMVLM
Sbjct: 8 ISDISPSKENRTIIVRVVRLWFVRDIKKDQFPFSLEMVLM 47
Score = 44.3 bits (103), Expect(2) = 4e-10
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DRI+ASV+RTL+YK+ K + E V S A+NVG Y+T
Sbjct: 52 DRINASVRRTLIYKYEKELSEDRVISIGNFGFASNVGSYKT 92
>XP_014626114.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC106796981 [Glycine max]
Length = 801
Score = 48.5 bits (114), Expect(2) = 4e-10
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRT 356
DR+H SVK+T +YKF K ++EG YS Q VA N G YRT
Sbjct: 627 DRVHGSVKQTFIYKFDKALQEGKWYSIQFFGVAENGGIYRT 667
Score = 42.7 bits (99), Expect(2) = 4e-10
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 6/46 (13%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKH------KIPFSIEMVLM 226
++EI+ +E+W I+ RVV LW+VSD + + KIP S+EMVL+
Sbjct: 577 VAEINVEKESWRIMVRVVHLWMVSDVSNNKQTSSSKIPLSMEMVLV 622
>XP_007144285.1 hypothetical protein PHAVU_007G143500g [Phaseolus vulgaris]
ESW16279.1 hypothetical protein PHAVU_007G143500g
[Phaseolus vulgaris]
Length = 474
Score = 47.0 bits (110), Expect(2) = 6e-10
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +2
Query: 107 ISEISASRETWSIIPRVVCLWVVSDFTKHKIPFSIEMVL 223
+ +++ E W +I RV+ LW VSDF K K PFS+EMV+
Sbjct: 8 VKDVNPQSENWILIARVIRLWFVSDFKKTKFPFSMEMVI 46
Score = 43.9 bits (102), Expect(2) = 6e-10
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +3
Query: 234 DRIHASVKRTLVYKFVKLVKEGSVYSFQGLTVAANVGDYRTNVICMEDD 380
DRIH SV+RTL+YKF + E YSF +V+ N + T V C+ +D
Sbjct: 52 DRIHVSVRRTLIYKFQNDIFEDKFYSFNFFSVSTNF-QFGTKVTCVGND 99