BLASTX nr result

ID: Glycyrrhiza29_contig00014964 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00014964
         (482 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004506862.2 PREDICTED: nuclear pore complex protein NUP50A-li...    46   7e-06

>XP_004506862.2 PREDICTED: nuclear pore complex protein NUP50A-like [Cicer
           arietinum]
          Length = 737

 Score = 46.2 bits (108), Expect(2) = 7e-06
 Identities = 35/103 (33%), Positives = 40/103 (38%)
 Frame = +1

Query: 49  DKESASEVDKEPXXXXXXXXXXXXXXXXXXXXXXXXXASGETSAEGGTLESFQQLSSNQN 228
           DKES S  D E                           S E +AEGG L+SFQQLSS+QN
Sbjct: 168 DKESVSVNDIEQSTEEKNTENNDKNENSESKDKEDNKVSNEPTAEGGALKSFQQLSSSQN 227

Query: 229 AXXXXXXXXXXXXXXXXXPISNDXXXXXXXXXXXIFGMKNDKP 357
           A                 PIS+D           IFGMK D+P
Sbjct: 228 AFTGLAGTGFSSSLFSFGPISSD-GSALGSGSGSIFGMKTDRP 269



 Score = 46.2 bits (108), Expect(2) = 7e-06
 Identities = 35/103 (33%), Positives = 40/103 (38%)
 Frame = +1

Query: 49  DKESASEVDKEPXXXXXXXXXXXXXXXXXXXXXXXXXASGETSAEGGTLESFQQLSSNQN 228
           DKES S  D E                           S E +AEGG L+SFQQLSS+QN
Sbjct: 475 DKESVSVNDIEQSTEEKNTENNDKNENSESKDKEDNKVSNEPTAEGGALKSFQQLSSSQN 534

Query: 229 AXXXXXXXXXXXXXXXXXPISNDXXXXXXXXXXXIFGMKNDKP 357
           A                 PIS+D           IFGMK D+P
Sbjct: 535 AFTGLAGTGFSSSLFSFGPISSD-GSALGSGSGSIFGMKTDRP 576



 Score = 30.8 bits (68), Expect(2) = 7e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 3   KDGDKIENEDKKDAA 47
           KDG+KIENEDKK+AA
Sbjct: 153 KDGNKIENEDKKNAA 167



 Score = 30.8 bits (68), Expect(2) = 7e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 3   KDGDKIENEDKKDAA 47
           KDG+KIENEDKK+AA
Sbjct: 460 KDGNKIENEDKKNAA 474