BLASTX nr result
ID: Glycyrrhiza29_contig00006671
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00006671
(448 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum] 70 8e-13
XP_008341993.1 PREDICTED: uncharacterized protein LOC103404803 [... 49 2e-07
GAU10517.1 hypothetical protein TSUD_421950, partial [Trifolium ... 54 2e-07
GAU37823.1 hypothetical protein TSUD_63850 [Trifolium subterraneum] 52 9e-07
YP_006666138.1 RnaseH (mitochondrion) [Malus domestica] CBX33402... 44 9e-07
GAU26533.1 hypothetical protein TSUD_361660 [Trifolium subterran... 50 2e-06
GAU51393.1 hypothetical protein TSUD_138060 [Trifolium subterran... 47 3e-06
GAU30604.1 hypothetical protein TSUD_392950 [Trifolium subterran... 42 3e-06
>GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum]
Length = 533
Score = 70.1 bits (170), Expect(2) = 8e-13
Identities = 37/100 (37%), Positives = 56/100 (56%)
Frame = -2
Query: 363 LFSLLLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAY 184
L ++ EMDS V+ +MV T+ +L PLL E + L+ + + HVYR++N A
Sbjct: 433 LLPKVVFEMDSKVIVNMVTSGHTNNAYLSPLLGEVVSLLQHPNWETSIAHVYREANRCAD 492
Query: 183 LLASMGHGTSFQPTVFEGARSSLQCFLSEDMRGVALPRTV 64
L + GH +SF+ + A SLQ L +D RG +LPR +
Sbjct: 493 FLTNKGHSSSFEGDIVNLACHSLQAILYDDFRGASLPRLI 532
Score = 30.4 bits (67), Expect(2) = 8e-13
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 448 FCCNLGSSTSVAAELWGLVLGLRLARSMAVQSFV 347
F +GSS ++ AE+W L +G+R+A+++ + V
Sbjct: 405 FYSKIGSSNAIWAEMWVLRIGIRIAQNLLLPKVV 438
>XP_008341993.1 PREDICTED: uncharacterized protein LOC103404803 [Malus domestica]
Length = 1433
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = -2
Query: 351 LLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDR--ACQLRHVYRKSNHSAYLL 178
+++E DS V+ Q L PL + A +R C++ H+YR+ N SA +
Sbjct: 1337 VILECDS---WDAVISIQKPMLVSHPLYNLILDCKEAIERNWRCEVTHIYREKNASADHM 1393
Query: 177 ASMGHGTSFQPTVFEGARSSLQCFLSEDMRGVALPRTVL 61
A +GHG S VF+ ++ FL+ D G ALPR VL
Sbjct: 1394 ADLGHGLSLGLHVFDSPPTTATNFLASDSIGRALPRAVL 1432
Score = 33.1 bits (74), Expect(2) = 2e-07
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 448 FCCNLGSSTSVAAELWGLVLGLRLA 374
F NLG T + AELWG+++GL +A
Sbjct: 1305 FAANLGRGTXMEAELWGVLMGLTIA 1329
>GAU10517.1 hypothetical protein TSUD_421950, partial [Trifolium subterraneum]
Length = 238
Score = 53.5 bits (127), Expect(2) = 2e-07
Identities = 26/89 (29%), Positives = 47/89 (52%)
Frame = -2
Query: 351 LLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYLLAS 172
+++E DS+ V +M+ T +L+PLL E I L++ + H++R++N A LA
Sbjct: 142 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPSWTIHVNHIHREANSCANALAF 201
Query: 171 MGHGTSFQPTVFEGARSSLQCFLSEDMRG 85
GH F + + + + L +D+RG
Sbjct: 202 KGHDVGFTHVLLDSIPAYISTLLDKDLRG 230
Score = 28.9 bits (63), Expect(2) = 2e-07
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 448 FCCNLGSSTSVAAELWGLVLGLRLARSMAV 359
F NLG+ ++ AEL G++ G ++AR M +
Sbjct: 110 FLRNLGTGNALLAELCGILFGCQMARDMCL 139
>GAU37823.1 hypothetical protein TSUD_63850 [Trifolium subterraneum]
Length = 193
Score = 51.6 bits (122), Expect(2) = 9e-07
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = -2
Query: 351 LLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYLLAS 172
+++E DS+ V +M+ T +L+PLL E I L++ + H++R++N LA
Sbjct: 97 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPSWTIHVNHIHREANSCVDALAF 156
Query: 171 MGHGTSFQPTVFEGARSSLQCFLSEDMRG 85
GH F + + + + L +D+RG
Sbjct: 157 KGHDVGFTHVLLDSIPAYISTLLDKDLRG 185
Score = 28.5 bits (62), Expect(2) = 9e-07
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 448 FCCNLGSSTSVAAELWGLVLGLRLARSM 365
F NLG+ ++ AEL G++ G ++AR M
Sbjct: 65 FLRNLGTGNALLAELCGILFGCQMARDM 92
>YP_006666138.1 RnaseH (mitochondrion) [Malus domestica] CBX33402.1 rnaseH
(mitochondrion) [Malus domestica]
Length = 153
Score = 44.3 bits (103), Expect(2) = 9e-07
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = -2
Query: 360 FSLLLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYL 181
F + VE+DS+ V ++V L L++ Q D C+L H+YR+ N SA
Sbjct: 54 FRSVEVEVDSATVVTLVNQQDNSLHPLHTLIR-GCQAYLKMDWHCKLSHIYREKNFSADY 112
Query: 180 LASMGHGTSFQPTVFEGARSSLQC--FLSEDMRGVALPRTVL 61
LAS+ G ++ FE C FL ED G A PR V+
Sbjct: 113 LASI--GLTYDLGYFESQSPPPGCIPFLFEDSLGYARPREVI 152
Score = 35.8 bits (81), Expect(2) = 9e-07
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1
Query: 448 FCCNLGSSTSVAAELWGLVLGLRLA 374
F NLG +AAELWGL GLRLA
Sbjct: 25 FTANLGKGKIIAAELWGLFFGLRLA 49
>GAU26533.1 hypothetical protein TSUD_361660 [Trifolium subterraneum]
Length = 193
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = -2
Query: 351 LLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYLLAS 172
+++E DS+ V +M+ T +L+PLL E I L++ + H++R++N LA
Sbjct: 97 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPGWTIHVNHIHREANSCFDALAF 156
Query: 171 MGHGTSFQPTVFEGARSSLQCFLSEDMRG 85
GH F + + + + L +D+RG
Sbjct: 157 KGHDVGFTHVMLDSIPAYISTLLDKDLRG 185
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 448 FCCNLGSSTSVAAELWGLVLGLRLARSM 365
F NLG+ ++ AEL G++ G ++AR M
Sbjct: 65 FLRNLGTGNALLAELCGILFGCQMARDM 92
>GAU51393.1 hypothetical protein TSUD_138060 [Trifolium subterraneum]
Length = 167
Score = 47.0 bits (110), Expect(2) = 3e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = -2
Query: 270 LQEAIQLVYATDRACQLRHVYRKSNHSAYLLASMGHGTSFQPTVFEGARSSLQCFLSEDM 91
+ + IQ + D +L H+YR++N A +LA+MG + ++E ++ L +D
Sbjct: 97 IMKKIQELLNLDWEIRLTHIYREANRCADILANMGSNLAANKMIYEEPPLEVRQVLFDDF 156
Query: 90 RGVALPRTVL 61
RGV+LPR VL
Sbjct: 157 RGVSLPRVVL 166
Score = 31.6 bits (70), Expect(2) = 3e-06
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -1
Query: 436 LGSSTSVAAELWGLVLGLRLARSMAV 359
LG++T+ AE+WGL GL LAR++ +
Sbjct: 43 LGNTTAYMAEIWGLYEGLCLARNLGI 68
>GAU30604.1 hypothetical protein TSUD_392950 [Trifolium subterraneum]
Length = 233
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 27/99 (27%), Positives = 56/99 (56%)
Frame = -2
Query: 360 FSLLLVEMDSSVVCSMVLLHQTHCLWLRPLLQEAIQLVYATDRACQLRHVYRKSNHSAYL 181
F+ L V+MDS ++ S++ H + ++++ I+ + + D + ++ H YR++N A +
Sbjct: 134 FNKLEVQMDSEIIVSIINKHGHGNVSGWSIIKK-IRSLLSLDWSVKICHFYREANRCADM 192
Query: 180 LASMGHGTSFQPTVFEGARSSLQCFLSEDMRGVALPRTV 64
LA+MG + ++ ++L+ L +D RGV+ R V
Sbjct: 193 LANMGCVHNHGTLIYNQPLTNLRQLLDDDNRGVSFLRLV 231
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1
Query: 448 FCCNLGSSTSVAAELWGLVLGLRLARSM 365
F +LGS+T+ AELWGL+ G+ +ARSM
Sbjct: 105 FSKSLGSATAYVAELWGLLEGISIARSM 132