BLASTX nr result

ID: Glycyrrhiza29_contig00005132 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00005132
         (493 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003628951.2 RNA recognition motif (RRM) containing protein [M...    45   5e-09

>XP_003628951.2 RNA recognition motif (RRM) containing protein [Medicago truncatula]
            AET03427.2 RNA recognition motif (RRM) containing protein
            [Medicago truncatula]
          Length = 1031

 Score = 45.4 bits (106), Expect(2) = 5e-09
 Identities = 25/37 (67%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
 Frame = -1

Query: 490  TGAGKRVEAERGMIMIRIEAG--IGTGEGVPNDISHA 386
            TG+G+RVEA RGMIMI IEAG    T E  PN ISHA
Sbjct: 963  TGSGRRVEAGRGMIMIGIEAGTETETEEDAPNSISHA 999



 Score = 42.4 bits (98), Expect(2) = 5e-09
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = -3

Query: 380  NQRAITLMVCR*LVCKSLDSWLFVIIGGS 294
            +QR++TL VCR  VCKS +SWLFVIIGG+
Sbjct: 1000 HQRSVTLTVCR-RVCKSSNSWLFVIIGGN 1027


Top