BLASTX nr result

ID: Glycyrrhiza29_contig00004906 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00004906
         (487 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP76979.1 Arginine/serine-rich-splicing factor RSP41 [Cajanus c...   137   5e-39
CBI38777.3 unnamed protein product, partial [Vitis vinifera]           97   3e-22

>KYP76979.1 Arginine/serine-rich-splicing factor RSP41 [Cajanus cajan]
          Length = 102

 Score =  137 bits (344), Expect = 5e-39
 Identities = 65/68 (95%), Positives = 66/68 (97%)
 Frame = +2

Query: 35  VGMSMLFLDGCASLHFFSRMCPSFSFLYFSRRNNLIRPSPAILHSLSIHCFFIPHDFCSV 214
           VGMSMLFLDGCASLHFFSRMCPSFS LYFSRRNNLIRPSPAILH LSIHCFFIPHDFCSV
Sbjct: 36  VGMSMLFLDGCASLHFFSRMCPSFS-LYFSRRNNLIRPSPAILHFLSIHCFFIPHDFCSV 94

Query: 215 FNFRHVST 238
           FNF+HVST
Sbjct: 95  FNFQHVST 102


>CBI38777.3 unnamed protein product, partial [Vitis vinifera]
          Length = 183

 Score = 96.7 bits (239), Expect = 3e-22
 Identities = 46/68 (67%), Positives = 49/68 (72%)
 Frame = +2

Query: 35  VGMSMLFLDGCASLHFFSRMCPSFSFLYFSRRNNLIRPSPAILHSLSIHCFFIPHDFCSV 214
           +GM ML LDG A LHFFS +CP F+FL FS R NLI     ILHSL  HC FIPHD CSV
Sbjct: 116 LGMPMLLLDGWALLHFFSSICPDFAFLCFSGRTNLICNGTTILHSLRHHCLFIPHDLCSV 175

Query: 215 FNFRHVST 238
            NFRHVST
Sbjct: 176 LNFRHVST 183


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