BLASTX nr result
ID: Glycyrrhiza28_contig00041114
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00041114
(449 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_063618977.1 integrase [Bradyrhizobium sp. th.b2] 124 4e-31
WP_074130199.1 hypothetical protein [Bradyrhizobium sp. NAS96.2] 107 4e-26
WP_063711789.1 integrase, partial [Bradyrhizobium japonicum] 111 4e-26
SED09430.1 Integrase [Bradyrhizobium erythrophlei] 108 3e-25
WP_057741322.1 integrase [Bradyrhizobium manausense] KRQ17114.1 ... 103 2e-23
WP_011474280.1 integrase [Rhodopseudomonas palustris] ABD89398.1... 103 2e-23
SFP95956.1 Site-specific recombinase XerD [Bradyrhizobium sp. Ghvi] 103 3e-23
SFN38917.1 Integrase [Bradyrhizobium sp. Rc3b] 101 2e-22
WP_076829842.1 integrase [Bradyrhizobium sp. UFLA 03-321] OMI058... 100 6e-22
WP_057018951.1 integrase [Bradyrhizobium pachyrhizi] KRP90021.1 ... 89 4e-18
WP_011924398.1 integrase [Bradyrhizobium sp. ORS 278] CAL75161.1... 89 8e-18
WP_009030750.1 integrase [Bradyrhizobium sp. ORS 375] CCD95844.1... 87 2e-17
WP_011665382.1 integrase [Rhodopseudomonas palustris] ABJ07920.1... 86 5e-17
WP_044406634.1 integrase [Rhodopseudomonas palustris] KIZ47274.1... 84 5e-16
WP_076644425.1 hypothetical protein [Methylobacterium extorquens... 82 1e-15
SEE28090.1 protein of unknown function [Rhizobiales bacterium GA... 81 3e-15
WP_011159617.1 integrase [Rhodopseudomonas palustris] CAE29523.1... 81 4e-15
WP_049768178.1 hypothetical protein [Methylocella silvestris] 80 4e-15
WP_050900022.1 hypothetical protein [Methylobacterium extorquens] 80 5e-15
WP_046867480.1 hypothetical protein [Microvirga massiliensis] 80 6e-15
>WP_063618977.1 integrase [Bradyrhizobium sp. th.b2]
Length = 408
Score = 124 bits (311), Expect = 4e-31
Identities = 61/81 (75%), Positives = 66/81 (81%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQKPAHV 269
ADRLGVLPHIVEAILNHVSGHRAG AGVYNRARYAAEMREALERWA+HV AL QKP +
Sbjct: 326 ADRLGVLPHIVEAILNHVSGHRAGVAGVYNRARYAAEMREALERWAQHVAALPAQKPGKI 385
Query: 268 DYAIAGASLSHPSVSRRAIRV 206
IAG+ LSH V+ A+ V
Sbjct: 386 GIVIAGSDLSHTGVAHGAVGV 406
>WP_074130199.1 hypothetical protein [Bradyrhizobium sp. NAS96.2]
Length = 207
Score = 107 bits (266), Expect = 4e-26
Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQKPAHV 269
ADRLG+LPHIVEAILNHVSGHRAG AGV NRARYAAEMREALERWAEHV AL +KP
Sbjct: 130 ADRLGILPHIVEAILNHVSGHRAGVAGVCNRARYAAEMREALERWAEHVAALPVRKPGR- 188
Query: 268 DYAIAG----ASLSHPSVSRR 218
A AG A ++H +V++R
Sbjct: 189 --AGAGSRPEAKITHSNVAKR 207
>WP_063711789.1 integrase, partial [Bradyrhizobium japonicum]
Length = 418
Score = 111 bits (277), Expect = 4e-26
Identities = 54/65 (83%), Positives = 57/65 (87%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQKPAHV 269
ADRLGVLPH+VEAILNHVSGHRAG AGVYNRA+YAAEMREAL RWAEHV+ALL QKP V
Sbjct: 345 ADRLGVLPHVVEAILNHVSGHRAGVAGVYNRAKYAAEMREALGRWAEHVSALLAQKPGKV 404
Query: 268 DYAIA 254
IA
Sbjct: 405 GIEIA 409
>SED09430.1 Integrase [Bradyrhizobium erythrophlei]
Length = 419
Score = 108 bits (271), Expect = 3e-25
Identities = 53/57 (92%), Positives = 53/57 (92%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQKP 278
ADRLGVLPHIVEAILNHVSGHRAG AGVYNRARYAAEMREALERWAEHV AL QKP
Sbjct: 345 ADRLGVLPHIVEAILNHVSGHRAGVAGVYNRARYAAEMREALERWAEHVAALPDQKP 401
>WP_057741322.1 integrase [Bradyrhizobium manausense] KRQ17114.1 integrase
[Bradyrhizobium manausense]
Length = 406
Score = 103 bits (258), Expect = 2e-23
Identities = 52/60 (86%), Positives = 52/60 (86%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQKPAHV 269
ADRLGVLPHIVEAILNHVSGHRAG AGVYNRARYAAEMREALERWA V AL QKP V
Sbjct: 345 ADRLGVLPHIVEAILNHVSGHRAGVAGVYNRARYAAEMREALERWALRVEALPAQKPGKV 404
>WP_011474280.1 integrase [Rhodopseudomonas palustris] ABD89398.1 phage integrase
[Rhodopseudomonas palustris BisB18]
Length = 400
Score = 103 bits (257), Expect = 2e-23
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQK 281
ADRLGVLPHIVEAILNHVSGHRAG AGVYNRARYA EMREALERW EHV AL QK
Sbjct: 345 ADRLGVLPHIVEAILNHVSGHRAGVAGVYNRARYATEMREALERWTEHVVALPAQK 400
>SFP95956.1 Site-specific recombinase XerD [Bradyrhizobium sp. Ghvi]
Length = 405
Score = 103 bits (256), Expect = 3e-23
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTAL 293
ADRLGVLPHIVEAILNHVSGHRAG AGVYNRARYA EMREALERWA+HVTAL
Sbjct: 345 ADRLGVLPHIVEAILNHVSGHRAGVAGVYNRARYATEMREALERWAQHVTAL 396
>SFN38917.1 Integrase [Bradyrhizobium sp. Rc3b]
Length = 405
Score = 101 bits (251), Expect = 2e-22
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTAL 293
ADRLGVLPHIVEAILNHVSGHRAG AGVYNRARY EMREALERWA+HVTAL
Sbjct: 345 ADRLGVLPHIVEAILNHVSGHRAGVAGVYNRARYETEMREALERWAQHVTAL 396
>WP_076829842.1 integrase [Bradyrhizobium sp. UFLA 03-321] OMI05844.1 integrase
[Bradyrhizobium sp. UFLA 03-321]
Length = 406
Score = 99.8 bits (247), Expect = 6e-22
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQK 281
ADRLGVLPHIVEAILNHVSGHRAG AGVYNRARYA EMREAL+RWA++V AL QK
Sbjct: 345 ADRLGVLPHIVEAILNHVSGHRAGVAGVYNRARYATEMREALQRWAQYVHALPAQK 400
>WP_057018951.1 integrase [Bradyrhizobium pachyrhizi] KRP90021.1 integrase
[Bradyrhizobium pachyrhizi]
Length = 428
Score = 89.4 bits (220), Expect = 4e-18
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -2
Query: 439 LGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQKPAHV 269
LGVLPHIVEA+LNHVSGHRAG AG+YNRA+Y E R+AL+RWA+HV AL +P +
Sbjct: 359 LGVLPHIVEAVLNHVSGHRAGVAGIYNRAQYLGETRDALDRWADHVAALTKPRPKSI 415
>WP_011924398.1 integrase [Bradyrhizobium sp. ORS 278] CAL75161.1 putative
phage-like integrase [Bradyrhizobium sp. ORS 278]
Length = 424
Score = 88.6 bits (218), Expect = 8e-18
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLTQKPA 275
AD+LGVLPHI+EA+LNHVSGHRAG A VYN ARY AEMR AL WA HV L+ KP+
Sbjct: 354 ADQLGVLPHIIEAVLNHVSGHRAGVAAVYNLARYEAEMRAALTAWASHVDRLVRSKPS 411
>WP_009030750.1 integrase [Bradyrhizobium sp. ORS 375] CCD95844.1 putative
phage-like integrase [Bradyrhizobium sp. ORS 375]
Length = 429
Score = 87.4 bits (215), Expect = 2e-17
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHV 302
ADRLGVLPHI+EA+LNHVSGHRAG AGVYN ARY AEMR AL WA HV
Sbjct: 354 ADRLGVLPHIIEAVLNHVSGHRAGVAGVYNHARYEAEMRAALTAWASHV 402
>WP_011665382.1 integrase [Rhodopseudomonas palustris] ABJ07920.1 phage integrase
family protein [Rhodopseudomonas palustris BisA53]
Length = 409
Score = 86.3 bits (212), Expect = 5e-17
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALL 290
ADRLGVLPHI+EA+LNHV GHRAG AGVYN ARY EMR AL+ WA+HV ++
Sbjct: 351 ADRLGVLPHIIEAVLNHVGGHRAGVAGVYNLARYETEMRAALKSWADHVNGIV 403
>WP_044406634.1 integrase [Rhodopseudomonas palustris] KIZ47274.1 integrase
[Rhodopseudomonas palustris]
Length = 408
Score = 83.6 bits (205), Expect = 5e-16
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHV 302
ADRLGV PHIVEA+LNHVSGHRAG AGVYN ARY +MR AL WA+H+
Sbjct: 354 ADRLGVFPHIVEAVLNHVSGHRAGVAGVYNLARYETDMRAALNAWADHI 402
>WP_076644425.1 hypothetical protein [Methylobacterium extorquens] APX88127.1
hypothetical protein BV511_13175 [Methylobacterium
extorquens]
Length = 384
Score = 82.0 bits (201), Expect = 1e-15
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -2
Query: 439 LGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTAL 293
LGVLPH+VEA+LNHVSGHRAG AG+YNRA Y E R+AL RWA+HV L
Sbjct: 331 LGVLPHVVEAVLNHVSGHRAGVAGIYNRASYQEEKRQALARWADHVAKL 379
>SEE28090.1 protein of unknown function [Rhizobiales bacterium GAS191]
Length = 407
Score = 81.3 bits (199), Expect = 3e-15
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = -2
Query: 439 LGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALL 290
LGVLPH++EAILNH SGH+AG AG+YNRA Y+AE R AL WAEHV AL+
Sbjct: 343 LGVLPHVIEAILNHTSGHKAGVAGIYNRASYSAEKRAALTLWAEHVKALV 392
>WP_011159617.1 integrase [Rhodopseudomonas palustris] CAE29523.1 possible
phage-like integrase [Rhodopseudomonas palustris CGA009]
Length = 408
Score = 80.9 bits (198), Expect = 4e-15
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -2
Query: 448 ADRLGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHV 302
ADRLGV PHIVEA+LNHVSGHRAG AGVYN ARY +MR AL WA+++
Sbjct: 354 ADRLGVFPHIVEAVLNHVSGHRAGVAGVYNLARYETDMRAALNAWADNI 402
>WP_049768178.1 hypothetical protein [Methylocella silvestris]
Length = 315
Score = 80.1 bits (196), Expect = 4e-15
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -2
Query: 439 LGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTAL 293
LGVLPH+VEAILNHVSGH+AG AGVYNR+ YA E R ALE+WAE+++ L
Sbjct: 263 LGVLPHVVEAILNHVSGHKAGVAGVYNRSVYAPEKRAALEKWAEYISNL 311
>WP_050900022.1 hypothetical protein [Methylobacterium extorquens]
Length = 393
Score = 80.5 bits (197), Expect = 5e-15
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = -2
Query: 439 LGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALL 290
LGVLPH+VEA+LNHVSGH+AG AGVYN+A Y E R+AL+RWA +V AL+
Sbjct: 343 LGVLPHVVEAVLNHVSGHKAGVAGVYNKATYLPEKRDALDRWANYVAALV 392
>WP_046867480.1 hypothetical protein [Microvirga massiliensis]
Length = 402
Score = 80.5 bits (197), Expect = 6e-15
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -2
Query: 439 LGVLPHIVEAILNHVSGHRAGAAGVYNRARYAAEMREALERWAEHVTALLT 287
LG LPH+VEAILNH+SGH++G AG+YNRA YA E REAL WA HV LL+
Sbjct: 342 LGTLPHVVEAILNHISGHKSGVAGIYNRATYAKEKREALNAWAAHVAGLLS 392