BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00040990
         (217 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_068729.1 putative reverse transcriptase [Soybean chlorotic mo...   104   2e-24
YP_002519387.1 putative enzymatic polyprotein [Rudbeckia flower ...    96   2e-21
YP_006907834.1 polyprotein [Horseradish latent virus] AAW56089.1...    94   1e-20
YP_009254008.1 putative aspartic protease [Water chestnut soymov...    93   2e-20
AFK73387.1 reverse transcriptase, partial [Blueberry red ringspo...    89   4e-20
NP_861410.1 putative multifunctional pol protein [Cestrum yellow...    90   2e-19
AEQ49589.1 reverse transcriptase [Blueberry red ringspot virus]        89   3e-19
AEH95573.1 reverse transcriptase [Blueberry red ringspot virus]        89   3e-19
AEE01492.1 reverse transcriptase [Blueberry red ringspot virus]        89   3e-19
CCG14716.1 ORF V protein [Strawberry vein banding virus]               89   3e-19
ALF37644.1 putative reverse transcriptase [Strawberry vein bandi...    89   3e-19
AKB94071.1 ORF V protein [Strawberry vein banding virus]               89   3e-19
NP_395469.1 putative reverse transcriptase [Blueberry red ringsp...    89   5e-19
AEQ38577.1 reverse transcriptase [Blueberry red ringspot virus]        89   5e-19
NP_043933.1 hypothetical protein [Strawberry vein banding virus]...    89   5e-19
ABX80502.1 RdRp, partial [Cauliflower mosaic virus]                    85   7e-18
ABX80501.1 RdRp, partial [Cauliflower mosaic virus]                    85   7e-18
AHA91297.1 reverse transcriptase [Cauliflower mosaic virus]            86   8e-18
AHA91290.1 reverse transcriptase [Cauliflower mosaic virus] AHA9...    86   8e-18
AGT42175.1 reverse transcriptase [Cauliflower mosaic virus]            86   8e-18

>NP_068729.1 putative reverse transcriptase [Soybean chlorotic mottle virus]
           P15629.2 RecName: Full=Enzymatic polyprotein; Includes:
           RecName: Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase CAC16945.1 putative reverse transcriptase
           [Soybean chlorotic mottle virus]
          Length = 692

 Score =  104 bits (259), Expect = 2e-24
 Identities = 47/71 (66%), Positives = 58/71 (81%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           ENHNEIK GKRRMVINYK+MN+A  GD+Y LPRKD I+E+++   WFS+ D KSG+YQ+R
Sbjct: 247 ENHNEIKRGKRRMVINYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLR 306

Query: 35  LTEESKALTAF 3
           L E +K LTAF
Sbjct: 307 LHENTKPLTAF 317


>YP_002519387.1 putative enzymatic polyprotein [Rudbeckia flower distortion virus]
           ACL36982.1 putative enzymatic polyprotein [Rudbeckia
           flower distortion virus]
          Length = 701

 Score = 95.9 bits (237), Expect = 2e-21
 Identities = 44/71 (61%), Positives = 53/71 (74%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           +NHNEIK GK+R+VINYK +N A   D Y LP K+ I+  +R  K+FST DCKSGF+QIR
Sbjct: 315 QNHNEIKRGKKRLVINYKALNAATISDGYLLPNKETILTAIRGRKYFSTLDCKSGFWQIR 374

Query: 35  LTEESKALTAF 3
           L E SK LTAF
Sbjct: 375 LNENSKPLTAF 385


>YP_006907834.1 polyprotein [Horseradish latent virus] AAW56089.1 polyprotein
           [Horseradish latent virus]
          Length = 679

 Score = 93.6 bits (231), Expect = 1e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           N  E + GK+RMV+NYK MNDA  GDAY LP KD ++  +R  K FS+FDCKSGF+Q+RL
Sbjct: 291 NEAEKRRGKKRMVVNYKAMNDATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVRL 350

Query: 32  TEESKALTAF 3
            EESK+LTAF
Sbjct: 351 DEESKSLTAF 360


>YP_009254008.1 putative aspartic protease [Water chestnut soymovirus 1] AND65752.1
           putative aspartic protease [Water chestnut soymovirus 1]
          Length = 680

 Score = 92.8 bits (229), Expect = 2e-20
 Identities = 42/70 (60%), Positives = 54/70 (77%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           NH E K GKRRMVINYK MN+A  G+AY LPR+D + ER+++  WFS+ D KSG++Q+RL
Sbjct: 240 NHAEQKRGKRRMVINYKAMNNATVGEAYKLPRQDYLFERIKDADWFSSLDAKSGYWQLRL 299

Query: 32  TEESKALTAF 3
            E +K LTAF
Sbjct: 300 AENTKPLTAF 309


>AFK73387.1 reverse transcriptase, partial [Blueberry red ringspot virus]
          Length = 255

 Score = 89.4 bits (220), Expect = 4e-20
 Identities = 43/71 (60%), Positives = 52/71 (73%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           ENH+EIK  KRR+VINYK MN+A  G    LPR D I+ R++   WFST D KS ++Q+R
Sbjct: 107 ENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLR 166

Query: 35  LTEESKALTAF 3
           LTEESK LTAF
Sbjct: 167 LTEESKPLTAF 177


>NP_861410.1 putative multifunctional pol protein [Cestrum yellow leaf curling
           virus] Q7TD08.1 RecName: Full=Enzymatic polyprotein;
           Includes: RecName: Full=Aspartic protease; Includes:
           RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase AAP78924.1 putative
           multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score = 89.7 bits (221), Expect = 2e-19
 Identities = 43/71 (60%), Positives = 53/71 (74%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           ENHNEIK  KRRMVINYK +N A  G+A+ LPR D I+ +V+   WFST D KSG++Q+R
Sbjct: 246 ENHNEIKRKKRRMVINYKALNKATIGNAHKLPRIDSILTKVKGSNWFSTLDAKSGYWQLR 305

Query: 35  LTEESKALTAF 3
           L  +SK LTAF
Sbjct: 306 LHPQSKPLTAF 316


>AEQ49589.1 reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 89.4 bits (220), Expect = 3e-19
 Identities = 43/71 (60%), Positives = 52/71 (73%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           ENH+EIK  KRR+VINYK MN+A  G    LPR D I+ R++   WFST D KS ++Q+R
Sbjct: 233 ENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLR 292

Query: 35  LTEESKALTAF 3
           LTEESK LTAF
Sbjct: 293 LTEESKPLTAF 303


>AEH95573.1 reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score = 89.4 bits (220), Expect = 3e-19
 Identities = 43/71 (60%), Positives = 52/71 (73%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           ENH+EIK  KRR+VINYK MN+A  G    LPR D I+ R++   WFST D KS ++Q+R
Sbjct: 243 ENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLR 302

Query: 35  LTEESKALTAF 3
           LTEESK LTAF
Sbjct: 303 LTEESKPLTAF 313


>AEE01492.1 reverse transcriptase [Blueberry red ringspot virus]
          Length = 680

 Score = 89.4 bits (220), Expect = 3e-19
 Identities = 43/71 (60%), Positives = 52/71 (73%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           ENH+EIK  KRR+VINYK MN+A  G    LPR D I+ R++   WFST D KS ++Q+R
Sbjct: 256 ENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLR 315

Query: 35  LTEESKALTAF 3
           LTEESK LTAF
Sbjct: 316 LTEESKPLTAF 326


>CCG14716.1 ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score = 89.4 bits (220), Expect = 3e-19
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           NH EIK GK RMVINYK++ND  +GD Y LP K+ +++R+    ++S+FDCKSGF+Q+RL
Sbjct: 314 NHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCKSGFWQVRL 373

Query: 32  TEESKALTAF 3
             E+  LTAF
Sbjct: 374 APETIQLTAF 383


>ALF37644.1 putative reverse transcriptase [Strawberry vein banding virus]
          Length = 704

 Score = 89.4 bits (220), Expect = 3e-19
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           NH EIK GK RMVINYK++ND  +GD Y LP K+ +++R+    ++S+FDCKSGF+Q+RL
Sbjct: 319 NHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCKSGFWQVRL 378

Query: 32  TEESKALTAF 3
             E+  LTAF
Sbjct: 379 APETIQLTAF 388


>AKB94071.1 ORF V protein [Strawberry vein banding virus]
          Length = 704

 Score = 89.4 bits (220), Expect = 3e-19
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           NH EIK GK RMVINYK++ND  +GD Y LP K+ +++R+    ++S+FDCKSGF+Q+RL
Sbjct: 319 NHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCKSGFWQVRL 378

Query: 32  TEESKALTAF 3
             E+  LTAF
Sbjct: 379 APETIQLTAF 388


>NP_395469.1 putative reverse transcriptase [Blueberry red ringspot virus]
           AAL13274.1 putative reverse transcriptase [Blueberry red
           ringspot virus]
          Length = 657

 Score = 89.0 bits (219), Expect = 5e-19
 Identities = 43/71 (60%), Positives = 52/71 (73%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           ENH+EIK  KRR+VINYK MN+A  G    LPR D I+ R++   WFST D KS ++Q+R
Sbjct: 233 ENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRADYIMNRLKGKIWFSTLDVKSAYWQLR 292

Query: 35  LTEESKALTAF 3
           LTEESK LTAF
Sbjct: 293 LTEESKPLTAF 303


>AEQ38577.1 reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 89.0 bits (219), Expect = 5e-19
 Identities = 43/71 (60%), Positives = 52/71 (73%)
 Frame = -3

Query: 215 ENHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIR 36
           ENH+EIK  KRR+VINYK MN+A  G    LPR D I+ R++   WFST D KS ++Q+R
Sbjct: 233 ENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRADYIMNRLKGKIWFSTLDVKSAYWQLR 292

Query: 35  LTEESKALTAF 3
           LTEESK LTAF
Sbjct: 293 LTEESKPLTAF 303


>NP_043933.1 hypothetical protein [Strawberry vein banding virus] CAA65970.1 ORF
           V [Strawberry vein banding virus]
          Length = 708

 Score = 89.0 bits (219), Expect = 5e-19
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           NH EIK GK RMVINYK++ND  +GD Y LP K+ +++R+    ++S+FDCKSGF+Q+RL
Sbjct: 323 NHAEIKRGKARMVINYKKLNDHTKGDGYLLPNKEQLLQRIGGKTFYSSFDCKSGFWQVRL 382

Query: 32  TEESKALTAF 3
             E+  LTAF
Sbjct: 383 APETIQLTAF 392


>ABX80502.1 RdRp, partial [Cauliflower mosaic virus]
          Length = 401

 Score = 85.1 bits (209), Expect = 7e-18
 Identities = 40/70 (57%), Positives = 51/70 (72%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           N  E + GK+RMV+NYK MN A  GDAY LP KD ++  +R  K FS+FDCKSGF+Q+ L
Sbjct: 244 NEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLL 303

Query: 32  TEESKALTAF 3
            +ES+ LTAF
Sbjct: 304 DQESRPLTAF 313


>ABX80501.1 RdRp, partial [Cauliflower mosaic virus]
          Length = 401

 Score = 85.1 bits (209), Expect = 7e-18
 Identities = 40/70 (57%), Positives = 51/70 (72%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           N  E + GK+RMV+NYK MN A  GDAY LP KD ++  +R  K FS+FDCKSGF+Q+ L
Sbjct: 244 NEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLL 303

Query: 32  TEESKALTAF 3
            +ES+ LTAF
Sbjct: 304 DQESRPLTAF 313


>AHA91297.1 reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 85.5 bits (210), Expect = 8e-18
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           N  E + GK+RMV+NYK MN A  GDAY LP KD ++  VR  K FS+FDCKSGF+Q+ L
Sbjct: 286 NEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLVRGKKIFSSFDCKSGFWQVLL 345

Query: 32  TEESKALTAF 3
            +ES+ LTAF
Sbjct: 346 DQESRPLTAF 355


>AHA91290.1 reverse transcriptase [Cauliflower mosaic virus] AHA91304.1 reverse
           transcriptase [Cauliflower mosaic virus] BAO53351.1
           reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 85.5 bits (210), Expect = 8e-18
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           N  E + GK+RMV+NYK MN A  GDAY LP KD ++  VR  K FS+FDCKSGF+Q+ L
Sbjct: 286 NEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLVRGKKIFSSFDCKSGFWQVLL 345

Query: 32  TEESKALTAF 3
            +ES+ LTAF
Sbjct: 346 DQESRPLTAF 355


>AGT42175.1 reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 85.5 bits (210), Expect = 8e-18
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = -3

Query: 212 NHNEIKSGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRL 33
           N  E + GK+RMV+NYK MN A  GDAY LP KD ++  VR  K FS+FDCKSGF+Q+ L
Sbjct: 287 NEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLVRGKKIFSSFDCKSGFWQVLL 346

Query: 32  TEESKALTAF 3
            +ES+ LTAF
Sbjct: 347 DQESRPLTAF 356