BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00040296
         (269 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_011914476.1 helicase SNF2 [Pseudomonas stutzeri] ABP81076.1 s...   179   1e-50
WP_047335652.1 helicase SNF2 [Pseudomonas fluorescens]                176   2e-49
WP_010431408.1 helicase SNF2 [Pseudomonas syringae]                   176   2e-49
WP_057711081.1 helicase SNF2 [Pseudomonas sp. DSM 29167] KRP7733...   175   5e-49
WP_015093406.1 SNF2 family DNA/RNA helicase [Pseudomonas sp. UW4...   175   5e-49
WP_025110489.1 helicase SNF2 [Pseudomonas sp. H1h]                    174   9e-49
WP_033939327.1 helicase SNF2 [Pseudomonas aeruginosa]                 173   2e-48
WP_033975359.1 helicase SNF2 [Pseudomonas aeruginosa]                 173   2e-48
WP_031691258.1 helicase SNF2 [Pseudomonas aeruginosa] EZN45282.1...   173   2e-48
WP_073668313.1 helicase SNF2 [Pseudomonas aeruginosa]                 169   4e-47
WP_031634681.1 helicase SNF2 [Pseudomonas aeruginosa] EZO16789.1...   169   4e-47
WP_031760946.1 helicase SNF2 [Pseudomonas aeruginosa] ETU76840.1...   169   4e-47
WP_054573631.1 helicase SNF2 [Pseudomonas putida] KPM59466.1 hel...   169   5e-47
WP_060213473.1 helicase SNF2 [Burkholderia cenocepacia] KWF17616...   163   6e-45
WP_056514044.1 helicase SNF2 [Variovorax sp. Root411] KQW61512.1...   156   2e-42
WP_064584948.1 helicase SNF2 [Pseudomonas citronellolis] ANI1830...   145   1e-38
WP_066098726.1 helicase SNF2 [Xanthomonas sp. SN8]                    144   3e-38
WP_052250823.1 helicase SNF2 [Xanthomonas sacchari]                   143   6e-38
WP_051064772.1 helicase SNF2 [Xanthomonas sp. SHU166]                 140   1e-36
WP_057645506.1 helicase SNF2 [Stenotrophomonas panacihumi] KRG46...   118   4e-29

>WP_011914476.1 helicase SNF2 [Pseudomonas stutzeri] ABP81076.1 superfamily II
           DNA/RNA helicase, SNF2 family [Pseudomonas stutzeri
           A1501]
          Length = 957

 Score =  179 bits (455), Expect = 1e-50
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL
Sbjct: 9   PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           VYDESPTFIASRLFIEARLRQSALQNESV
Sbjct: 69  VYDESPTFIASRLFIEARLRQSALQNESV 97


>WP_047335652.1 helicase SNF2 [Pseudomonas fluorescens]
          Length = 954

 Score =  176 bits (446), Expect = 2e-49
 Identities = 86/89 (96%), Positives = 89/89 (100%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARA+IRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLT+LEDVTLIDPAKTEL
Sbjct: 9   PGARALIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTQLEDVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           VYD+SPTFIASRLFIEARLRQSALQNESV
Sbjct: 69  VYDDSPTFIASRLFIEARLRQSALQNESV 97


>WP_010431408.1 helicase SNF2 [Pseudomonas syringae]
          Length = 954

 Score =  176 bits (446), Expect = 2e-49
 Identities = 86/89 (96%), Positives = 89/89 (100%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARA+IRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLT+LEDVTLIDPAKTEL
Sbjct: 9   PGARALIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTQLEDVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           VYD+SPTFIASRLFIEARLRQSALQNESV
Sbjct: 69  VYDDSPTFIASRLFIEARLRQSALQNESV 97


>WP_057711081.1 helicase SNF2 [Pseudomonas sp. DSM 29167] KRP77335.1 helicase SNF2
           [Pseudomonas sp. DSM 29167]
          Length = 954

 Score =  175 bits (443), Expect = 5e-49
 Identities = 87/89 (97%), Positives = 88/89 (98%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELE VTLIDPAKTEL
Sbjct: 9   PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEGVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           VYDESPTFIASRLFIEARLRQSALQ+ESV
Sbjct: 69  VYDESPTFIASRLFIEARLRQSALQSESV 97


>WP_015093406.1 SNF2 family DNA/RNA helicase [Pseudomonas sp. UW4] AFY17868.1 SNF2
           family DNA/RNA helicase [Pseudomonas sp. UW4]
          Length = 954

 Score =  175 bits (443), Expect = 5e-49
 Identities = 87/89 (97%), Positives = 88/89 (98%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELE VTLIDPAKTEL
Sbjct: 9   PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEGVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           VYDESPTFIASRLFIEARLRQSALQ+ESV
Sbjct: 69  VYDESPTFIASRLFIEARLRQSALQSESV 97


>WP_025110489.1 helicase SNF2 [Pseudomonas sp. H1h]
          Length = 954

 Score =  174 bits (441), Expect = 9e-49
 Identities = 85/89 (95%), Positives = 89/89 (100%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARA+IRDEEWIIQNADQC+LGGWQLSCIGVSETVRNRHALFLT+LEDVTLIDPAKTEL
Sbjct: 9   PGARALIRDEEWIIQNADQCSLGGWQLSCIGVSETVRNRHALFLTQLEDVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           VYD+SPTFIASRLFIEARLRQSALQNESV
Sbjct: 69  VYDDSPTFIASRLFIEARLRQSALQNESV 97


>WP_033939327.1 helicase SNF2 [Pseudomonas aeruginosa]
          Length = 957

 Score =  173 bits (439), Expect = 2e-48
 Identities = 83/89 (93%), Positives = 88/89 (98%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARA+IRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELED+TLIDPAKTEL
Sbjct: 9   PGARALIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDITLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           +YDESPTF ASRLFIEARLRQSALQN++V
Sbjct: 69  IYDESPTFTASRLFIEARLRQSALQNDAV 97


>WP_033975359.1 helicase SNF2 [Pseudomonas aeruginosa]
          Length = 964

 Score =  173 bits (438), Expect = 2e-48
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL
Sbjct: 9   PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           +YD+SPTF ASRLFIEARLRQSALQ++SV
Sbjct: 69  IYDDSPTFTASRLFIEARLRQSALQSDSV 97


>WP_031691258.1 helicase SNF2 [Pseudomonas aeruginosa] EZN45282.1 hypothetical
           protein AJ73_05219 [Pseudomonas aeruginosa BWH033]
           KTK55769.1 helicase SNF2 [Pseudomonas aeruginosa]
           ALZ13980.1 helicase SNF2 [Pseudomonas aeruginosa]
          Length = 964

 Score =  173 bits (438), Expect = 2e-48
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL
Sbjct: 9   PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           +YD+SPTF ASRLFIEARLRQSALQ++SV
Sbjct: 69  IYDDSPTFTASRLFIEARLRQSALQSDSV 97


>WP_073668313.1 helicase SNF2 [Pseudomonas aeruginosa]
          Length = 957

 Score =  169 bits (429), Expect = 4e-47
 Identities = 81/89 (91%), Positives = 87/89 (97%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PG+RA+IRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELED+T IDPAKTEL
Sbjct: 9   PGSRALIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDITPIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           +YDESPTF ASRLFIEARLRQSALQN++V
Sbjct: 69  IYDESPTFTASRLFIEARLRQSALQNDAV 97


>WP_031634681.1 helicase SNF2 [Pseudomonas aeruginosa] EZO16789.1 hypothetical
           protein AJ62_05989 [Pseudomonas aeruginosa 3575]
          Length = 957

 Score =  169 bits (429), Expect = 4e-47
 Identities = 81/89 (91%), Positives = 87/89 (97%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PG+RA+IRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELED+T IDPAKTEL
Sbjct: 9   PGSRALIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDITPIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           +YDESPTF ASRLFIEARLRQSALQN++V
Sbjct: 69  IYDESPTFTASRLFIEARLRQSALQNDAV 97


>WP_031760946.1 helicase SNF2 [Pseudomonas aeruginosa] ETU76840.1 hypothetical
           protein Q095_02408 [Pseudomonas aeruginosa PS50]
          Length = 957

 Score =  169 bits (429), Expect = 4e-47
 Identities = 81/89 (91%), Positives = 87/89 (97%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PG+RA+IRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELED+T IDPAKTEL
Sbjct: 9   PGSRALIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDITPIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           +YDESPTF ASRLFIEARLRQSALQN++V
Sbjct: 69  IYDESPTFTASRLFIEARLRQSALQNDAV 97


>WP_054573631.1 helicase SNF2 [Pseudomonas putida] KPM59466.1 helicase SNF2
           [Pseudomonas putida]
          Length = 957

 Score =  169 bits (428), Expect = 5e-47
 Identities = 82/89 (92%), Positives = 86/89 (96%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARA+IRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELED+TLIDPAKTEL
Sbjct: 9   PGARALIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDITLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
            YD+SPTF ASRLFIEARLRQSALQN +V
Sbjct: 69  FYDDSPTFTASRLFIEARLRQSALQNGAV 97


>WP_060213473.1 helicase SNF2 [Burkholderia cenocepacia] KWF17616.1 helicase SNF2
           [Burkholderia cenocepacia]
          Length = 955

 Score =  163 bits (413), Expect = 6e-45
 Identities = 79/89 (88%), Positives = 88/89 (98%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARA+IRDEEWIIQ+ADQCNLGGWQLSCIGVSETVRNRHALFL++LE+VTLIDPAKTEL
Sbjct: 9   PGARALIRDEEWIIQSADQCNLGGWQLSCIGVSETVRNRHALFLSQLEEVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           V D+SPTFIA+RLFIEARLRQSALQ+E+V
Sbjct: 69  VNDDSPTFIAARLFIEARLRQSALQSEAV 97


>WP_056514044.1 helicase SNF2 [Variovorax sp. Root411] KQW61512.1 helicase SNF2
           [Variovorax sp. Root411]
          Length = 961

 Score =  156 bits (394), Expect = 2e-42
 Identities = 72/89 (80%), Positives = 85/89 (95%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGARA+IRDEEWI+QNAD C LGGWQLSCIG+SETVRNR ALFL++LEDVTLIDPAKTEL
Sbjct: 9   PGARALIRDEEWIVQNADVCQLGGWQLSCIGISETVRNRRALFLSQLEDVTLIDPAKTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           V+DESP+FIASRL++E++LRQSALQ E++
Sbjct: 69  VFDESPSFIASRLYVESKLRQSALQGEAI 97


>WP_064584948.1 helicase SNF2 [Pseudomonas citronellolis] ANI18303.1 helicase SNF2
           [Pseudomonas citronellolis]
          Length = 973

 Score =  145 bits (367), Expect = 1e-38
 Identities = 68/89 (76%), Positives = 82/89 (92%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PG+RA+IRDEEW++Q+ADQC  GGWQLSCIGVSETVRNRHALFLT L+DVTLIDPA+TEL
Sbjct: 9   PGSRALIRDEEWLVQHADQCAQGGWQLSCIGVSETVRNRHALFLTALDDVTLIDPAQTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           V+D+SP F+A+RL IEARLRQSA+Q + +
Sbjct: 69  VFDDSPGFMAARLAIEARLRQSAVQGDDL 97


>WP_066098726.1 helicase SNF2 [Xanthomonas sp. SN8]
          Length = 972

 Score =  144 bits (364), Expect = 3e-38
 Identities = 67/89 (75%), Positives = 83/89 (93%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PG+RA+IRDEEW++Q+ADQC  GGWQLSCIGVSETVRNRHALFLT L++VTLIDPA+TEL
Sbjct: 9   PGSRALIRDEEWLVQHADQCAQGGWQLSCIGVSETVRNRHALFLTALDEVTLIDPAQTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           V+D+SP F+A+RL IEARLRQSA+Q +++
Sbjct: 69  VFDDSPGFMAARLAIEARLRQSAVQGDAL 97


>WP_052250823.1 helicase SNF2 [Xanthomonas sacchari]
          Length = 971

 Score =  143 bits (361), Expect = 6e-38
 Identities = 66/89 (74%), Positives = 84/89 (94%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PG+RA+IRDEEW++Q+ADQC  GGWQLSCIGVSETVRNRHALFLT L++VT+I+PA+TEL
Sbjct: 9   PGSRALIRDEEWLVQHADQCAQGGWQLSCIGVSETVRNRHALFLTALDEVTMINPAQTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           V+D+SP F+A+RL IEARLRQSALQ++++
Sbjct: 69  VFDDSPGFMAARLAIEARLRQSALQSDAL 97


>WP_051064772.1 helicase SNF2 [Xanthomonas sp. SHU166]
          Length = 971

 Score =  140 bits (352), Expect = 1e-36
 Identities = 65/89 (73%), Positives = 82/89 (92%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PG+RA+IRDEEW++Q+ADQC  GGWQLSCIGVSETVRNR ALFLT L++VT+I+PA+TEL
Sbjct: 9   PGSRALIRDEEWLVQHADQCAQGGWQLSCIGVSETVRNRQALFLTALDEVTMINPAQTEL 68

Query: 88  VYDESPTFIASRLFIEARLRQSALQNESV 2
           V+D+SP F+A+RL IEARLRQSALQ +++
Sbjct: 69  VFDDSPGFMAARLAIEARLRQSALQGDAL 97


>WP_057645506.1 helicase SNF2 [Stenotrophomonas panacihumi] KRG46055.1 helicase
           SNF2 [Stenotrophomonas panacihumi]
          Length = 952

 Score =  118 bits (296), Expect = 4e-29
 Identities = 52/82 (63%), Positives = 71/82 (86%)
 Frame = -2

Query: 268 PGARAVIRDEEWIIQNADQCNLGGWQLSCIGVSETVRNRHALFLTELEDVTLIDPAKTEL 89
           PGAR +IRDEEW+++ A+QC+LGG +L C+GVSETVR+R ALFLTE+++V ++DP  TEL
Sbjct: 6   PGARVLIRDEEWLVRGANQCDLGGHELECLGVSETVRHREALFLTEIDEVKVLDPRDTEL 65

Query: 88  VYDESPTFIASRLFIEARLRQS 23
           V D+SP ++ SRL++EARLRQS
Sbjct: 66  VSDDSPAYLGSRLYLEARLRQS 87