BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00040242
         (332 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_024579791.1 MULTISPECIES: type II secretion system protein Gs...   195   2e-56
KIU45491.1 Type II and III secretion system protein [Bradyrhizob...   195   2e-56
SEE31683.1 general secretion pathway protein D [Bradyrhizobium e...   179   2e-50
WP_076863156.1 type II secretion system protein GspD [Bradyrhizo...   177   6e-50
ERF83107.1 type II secretion system protein D [Bradyrhizobium sp...   173   3e-48
WP_051334576.1 type II secretion system protein GspD [Bradyrhizo...   172   5e-48
WP_074126060.1 type II secretion system protein GspD [Bradyrhizo...   169   5e-47
WP_066504330.1 type II secretion system protein GspD [Bradyrhizo...   169   1e-46
WP_008973753.1 type II secretion system protein GspD [Bradyrhizo...   152   7e-41
WP_068031085.1 type II secretion system protein GspD [Rhodoplane...   126   1e-31
AMN40705.1 general secretion pathway protein D GspD [Rhodoplanes...   126   1e-31
WP_064032711.1 type II secretion system protein GspD [Methylosin...   120   2e-29
WP_036310023.1 type II secretion system protein GspD [Methylosin...   120   2e-29
WP_036290678.1 type II secretion system protein GspD [Methylocys...   120   2e-29
WP_051116094.1 type II secretion system protein GspD [Methylofer...   119   6e-29
WP_051116039.1 type II secretion system protein GspD [Methylofer...   116   4e-28
WP_026598293.1 type II secretion system protein GspD [Methylocys...   113   5e-27
WP_020175936.1 type II secretion system protein GspD [Methylofer...   113   5e-27
WP_036309967.1 type II secretion system protein GspD [Methylosin...   112   9e-27
WP_064033416.1 type II secretion system protein GspD [Methylosin...   112   1e-26

>WP_024579791.1 MULTISPECIES: type II secretion system protein GspD
           [Bradyrhizobium] OCX30498.1 type II secretion system
           protein GspD [Bradyrhizobium sp. UASWS1016]
          Length = 771

 Score =  195 bits (496), Expect = 2e-56
 Identities = 98/102 (96%), Positives = 101/102 (99%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPVTRMNAVLVVSKNSK+LERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR
Sbjct: 293 QGVIKFQPVTRMNAVLVVSKNSKILERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 352

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGTF 306
           ILNEMFVGRSS+QAGGDNQTS TAPGQ+GTTSRLDSLGSGTF
Sbjct: 353 ILNEMFVGRSSSQAGGDNQTSATAPGQNGTTSRLDSLGSGTF 394


>KIU45491.1 Type II and III secretion system protein [Bradyrhizobium elkanii]
          Length = 788

 Score =  195 bits (496), Expect = 2e-56
 Identities = 98/102 (96%), Positives = 101/102 (99%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPVTRMNAVLVVSKNSK+LERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR
Sbjct: 310 QGVIKFQPVTRMNAVLVVSKNSKILERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 369

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGTF 306
           ILNEMFVGRSS+QAGGDNQTS TAPGQ+GTTSRLDSLGSGTF
Sbjct: 370 ILNEMFVGRSSSQAGGDNQTSATAPGQNGTTSRLDSLGSGTF 411


>SEE31683.1 general secretion pathway protein D [Bradyrhizobium erythrophlei]
          Length = 809

 Score =  179 bits (455), Expect = 2e-50
 Identities = 91/101 (90%), Positives = 98/101 (97%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPV+RMNAVL VSKNSK+LERATQWVRRLDRSDPTGTTVRVYSLRFGNAR+IAR
Sbjct: 333 QGVIKFQPVSRMNAVLAVSKNSKVLERATQWVRRLDRSDPTGTTVRVYSLRFGNARSIAR 392

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           ILNEMFVGRSS Q+ GD+QTSPTAPGQSGTTSR+DSLG+GT
Sbjct: 393 ILNEMFVGRSS-QSAGDSQTSPTAPGQSGTTSRIDSLGAGT 432


>WP_076863156.1 type II secretion system protein GspD [Bradyrhizobium sp. SEMIA
           6399]
          Length = 784

 Score =  177 bits (450), Expect = 6e-50
 Identities = 91/101 (90%), Positives = 97/101 (96%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPV+RMNAVL VSKNSK+LERATQWVRRLDRSDPTGTTVRVYSLRFGNAR+IAR
Sbjct: 309 QGVIKFQPVSRMNAVLAVSKNSKVLERATQWVRRLDRSDPTGTTVRVYSLRFGNARSIAR 368

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           ILNEMFVGRSS Q+ GD+QTS TAPGQSGTTSR+DSLGSGT
Sbjct: 369 ILNEMFVGRSS-QSAGDSQTSATAPGQSGTTSRIDSLGSGT 408


>ERF83107.1 type II secretion system protein D [Bradyrhizobium sp. DFCI-1]
          Length = 797

 Score =  173 bits (438), Expect = 3e-48
 Identities = 88/101 (87%), Positives = 96/101 (95%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPV+RMNAVL VSKNSK+LERATQWVRRLDRSDPTGTTVRVYSLRFGNAR+IAR
Sbjct: 322 QGVIKFQPVSRMNAVLAVSKNSKVLERATQWVRRLDRSDPTGTTVRVYSLRFGNARSIAR 381

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           ILNEMFVGR+S Q+  D+QTS TAPGQSGTTSR+DSLG+GT
Sbjct: 382 ILNEMFVGRNS-QSASDSQTSATAPGQSGTTSRIDSLGAGT 421


>WP_051334576.1 type II secretion system protein GspD [Bradyrhizobium sp. Ai1a-2]
          Length = 767

 Score =  172 bits (436), Expect = 5e-48
 Identities = 87/101 (86%), Positives = 94/101 (93%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPV+RMNAVL VSKNSK+LERATQWVRRLDRSDPTGTTVRVYSLR+G+AR+IAR
Sbjct: 292 QGVIKFQPVSRMNAVLAVSKNSKVLERATQWVRRLDRSDPTGTTVRVYSLRYGSARSIAR 351

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           ILNEMFVGRSS     D+QTS TAPGQSGTTSRLDSLG+GT
Sbjct: 352 ILNEMFVGRSSQSGSLDSQTSTTAPGQSGTTSRLDSLGTGT 392


>WP_074126060.1 type II secretion system protein GspD [Bradyrhizobium sp. NAS96.2]
           OKO81387.1 Type II and III secretion system protein
           [Bradyrhizobium sp. NAS96.2]
          Length = 755

 Score =  169 bits (429), Expect = 5e-47
 Identities = 87/101 (86%), Positives = 93/101 (92%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPV+RMNAVL VSKNSK+LERATQWVRRLDRSDPTGTTVRVYSLRFGNAR+IAR
Sbjct: 279 QGVIKFQPVSRMNAVLAVSKNSKVLERATQWVRRLDRSDPTGTTVRVYSLRFGNARSIAR 338

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           ILNEMFVGR S Q+  D+QTS TAPGQS  TSR+DSLGSGT
Sbjct: 339 ILNEMFVGRGS-QSASDSQTSATAPGQSAATSRIDSLGSGT 378


>WP_066504330.1 type II secretion system protein GspD [Bradyrhizobium sp. BR 10303]
           KWV57806.1 type II secretion system protein GspD
           [Bradyrhizobium sp. BR 10303]
          Length = 796

 Score =  169 bits (427), Expect = 1e-46
 Identities = 85/101 (84%), Positives = 90/101 (89%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPVTRMNAVL VSKNSK+LERATQWV RLDRSDP+GTTVRVYSLRFGNAR+IAR
Sbjct: 310 QGVIKFQPVTRMNAVLAVSKNSKMLERATQWVSRLDRSDPSGTTVRVYSLRFGNARSIAR 369

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           +LNEMFVGRSS Q GG +  S TAPGQ   TSRLDSLGSGT
Sbjct: 370 LLNEMFVGRSSQQGGGSDGQSTTAPGQGAATSRLDSLGSGT 410


>WP_008973753.1 type II secretion system protein GspD [Bradyrhizobium sp. STM 3843]
           CCE11245.1 Type II and III secretion system protein
           [Bradyrhizobium sp. STM 3843]
          Length = 786

 Score =  152 bits (385), Expect = 7e-41
 Identities = 76/101 (75%), Positives = 85/101 (84%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QGVIKFQPV+RMNAVL VS+NSK+LERATQWV+RLDRSD +GTTVR Y LRFG+AR IAR
Sbjct: 308 QGVIKFQPVSRMNAVLAVSRNSKVLERATQWVQRLDRSDLSGTTVRTYGLRFGSARAIAR 367

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           +LNEMFVGRS        Q SPTAPGQ+  TSR+DSLGSGT
Sbjct: 368 MLNEMFVGRSGQNVADSGQQSPTAPGQAAATSRIDSLGSGT 408


>WP_068031085.1 type II secretion system protein GspD [Rhodoplanes sp. Z2-YC6860]
          Length = 703

 Score =  126 bits (317), Expect = 1e-31
 Identities = 59/101 (58%), Positives = 79/101 (78%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QG IKFQP++RMNAVL V+++ K++ER TQWV+RLDRSD  GTTVRVY L+ G+A+ +A+
Sbjct: 207 QGAIKFQPISRMNAVLAVARSPKMIERVTQWVQRLDRSDTGGTTVRVYHLKNGSAQRLAK 266

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           +LN++FVGR  A   GD   S  APGQ+ + SRLDSL +G+
Sbjct: 267 VLNDIFVGRGGAGTSGDTAASQIAPGQNASQSRLDSLNTGS 307


>AMN40705.1 general secretion pathway protein D GspD [Rhodoplanes sp.
           Z2-YC6860]
          Length = 817

 Score =  126 bits (317), Expect = 1e-31
 Identities = 59/101 (58%), Positives = 79/101 (78%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QG IKFQP++RMNAVL V+++ K++ER TQWV+RLDRSD  GTTVRVY L+ G+A+ +A+
Sbjct: 321 QGAIKFQPISRMNAVLAVARSPKMIERVTQWVQRLDRSDTGGTTVRVYHLKNGSAQRLAK 380

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           +LN++FVGR  A   GD   S  APGQ+ + SRLDSL +G+
Sbjct: 381 VLNDIFVGRGGAGTSGDTAASQIAPGQNASQSRLDSLNTGS 421


>WP_064032711.1 type II secretion system protein GspD [Methylosinus sp. R-45379]
           OAI30426.1 type II secretion system protein GspD
           [Methylosinus sp. R-45379]
          Length = 748

 Score =  120 bits (300), Expect = 2e-29
 Identities = 56/100 (56%), Positives = 75/100 (75%)
 Frame = +1

Query: 4   GVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIARI 183
           G +KFQP++RMNAV+ ++++ ++LER T WVRRLDRSD TGTTVR+Y L  GNA  IA+I
Sbjct: 260 GAVKFQPISRMNAVMAMTQSPRMLERVTLWVRRLDRSDMTGTTVRIYRLENGNATKIAKI 319

Query: 184 LNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           LNE+FVG+ +  +  D  TS  APG S   S+LDS+ SG+
Sbjct: 320 LNEIFVGKGAGSSTSDTATSQIAPGASAAQSKLDSVSSGS 359


>WP_036310023.1 type II secretion system protein GspD [Methylosinus sp. LW3]
          Length = 748

 Score =  120 bits (300), Expect = 2e-29
 Identities = 56/100 (56%), Positives = 75/100 (75%)
 Frame = +1

Query: 4   GVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIARI 183
           G +KFQP++RMNAV+ ++++ ++LER T WVRRLDRSD TGTTVR+Y L  GNA  IA+I
Sbjct: 260 GAVKFQPISRMNAVMAMTQSPRMLERVTLWVRRLDRSDMTGTTVRIYRLENGNATKIAKI 319

Query: 184 LNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           LNE+FVG+ +  +  D  TS  APG S   S+LDS+ SG+
Sbjct: 320 LNEIFVGKGAGSSTSDTATSQIAPGASAAQSKLDSVSSGS 359


>WP_036290678.1 type II secretion system protein GspD [Methylocystis sp. LW5]
          Length = 748

 Score =  120 bits (300), Expect = 2e-29
 Identities = 56/100 (56%), Positives = 75/100 (75%)
 Frame = +1

Query: 4   GVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIARI 183
           G +KFQP++RMNAV+ ++++ ++LER T WVRRLDRSD TGTTVR+Y L  GNA  IA+I
Sbjct: 260 GAVKFQPISRMNAVMAMTQSPRMLERVTLWVRRLDRSDMTGTTVRIYRLENGNATKIAKI 319

Query: 184 LNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           LNE+FVG+ +  +  D  TS  APG S   S+LDS+ SG+
Sbjct: 320 LNEIFVGKGAGSSTSDTATSQIAPGASAAQSKLDSVSSGS 359


>WP_051116094.1 type II secretion system protein GspD [Methyloferula stellata]
          Length = 751

 Score =  119 bits (297), Expect = 6e-29
 Identities = 57/102 (55%), Positives = 76/102 (74%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QG+I FQP+ RMNA++ V+ N KLL++ATQWV+RLD SD +GTT+R+Y L  GNA  IA+
Sbjct: 269 QGLINFQPIARMNAIMAVTHNRKLLDQATQWVKRLDHSDASGTTIRIYRLEHGNAPKIAK 328

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGTF 306
           ILN++FVGR S  A  D   +  APG +   SRLDS+G+G+F
Sbjct: 329 ILNDIFVGRGSG-ATADAAANQVAPGTNAGQSRLDSIGAGSF 369


>WP_051116039.1 type II secretion system protein GspD [Methyloferula stellata]
          Length = 757

 Score =  116 bits (291), Expect = 4e-28
 Identities = 57/100 (57%), Positives = 72/100 (72%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           QG+I FQP+ RMNAV+ VS N K+L++ TQW+RRLD+SD +GTTVRVY L  G A  IA+
Sbjct: 277 QGMINFQPIPRMNAVMAVSHNRKILDQTTQWIRRLDKSDTSGTTVRVYRLEHGAAAKIAK 336

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSG 300
           ILN++FVGR    A  DN  S  APG +   S+LD+LG G
Sbjct: 337 ILNDIFVGRGGG-AAADNAASQVAPGSNSGQSKLDALGGG 375


>WP_026598293.1 type II secretion system protein GspD [Methylocystis sp. LW5]
          Length = 744

 Score =  113 bits (283), Expect = 5e-27
 Identities = 58/100 (58%), Positives = 75/100 (75%)
 Frame = +1

Query: 4   GVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIARI 183
           G I FQP+ RMNAVL+V++N +LLERAT W+RRLDRSD +G+TVRVY L  GNA  IA+I
Sbjct: 261 GTIAFQPMPRMNAVLIVTRNRQLLERATLWLRRLDRSDVSGSTVRVYQLVNGNATRIAKI 320

Query: 184 LNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           LNE+FVG+ + QA  D+  S  APG S   ++LD L +G+
Sbjct: 321 LNEIFVGKGAGQA-ADSAASQLAPGISAAQTKLDQLSTGS 359


>WP_020175936.1 type II secretion system protein GspD [Methyloferula stellata]
          Length = 752

 Score =  113 bits (283), Expect = 5e-27
 Identities = 55/98 (56%), Positives = 75/98 (76%)
 Frame = +1

Query: 1   QGVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIAR 180
           +G+I FQP++RMNAV+ V+ N K L++ATQW+RRLD+SD +GTTVRVY L  G+A  IAR
Sbjct: 268 EGLISFQPISRMNAVMAVAHNRKFLDQATQWIRRLDQSDSSGTTVRVYRLDHGSAFKIAR 327

Query: 181 ILNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLG 294
           ILN+MFVG+S   A  ++  S  APG +G  S+LD++G
Sbjct: 328 ILNDMFVGKSGGSA-SESSGSQVAPGTNGALSKLDAVG 364


>WP_036309967.1 type II secretion system protein GspD [Methylosinus sp. LW3]
          Length = 744

 Score =  112 bits (281), Expect = 9e-27
 Identities = 58/100 (58%), Positives = 75/100 (75%)
 Frame = +1

Query: 4   GVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIARI 183
           G I FQP+ RMNAVL+V++N +LLERAT W+RRLDRSD +G+TVRVY L  GNA  IA+I
Sbjct: 261 GTIAFQPMPRMNAVLIVTRNRQLLERATLWLRRLDRSDVSGSTVRVYQLVNGNATRIAKI 320

Query: 184 LNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           LNE+FVG+ + QA  D+  S  APG S   ++LD L +G+
Sbjct: 321 LNEIFVGKGAGQA-TDSAASQLAPGISAAQTKLDQLSTGS 359


>WP_064033416.1 type II secretion system protein GspD [Methylosinus sp. R-45379]
           OAI26224.1 type II secretion system protein GspD
           [Methylosinus sp. R-45379]
          Length = 744

 Score =  112 bits (280), Expect = 1e-26
 Identities = 58/100 (58%), Positives = 75/100 (75%)
 Frame = +1

Query: 4   GVIKFQPVTRMNAVLVVSKNSKLLERATQWVRRLDRSDPTGTTVRVYSLRFGNARNIARI 183
           G I FQP+ RMNAVL+V++N +LLERAT W+RRLDRSD +G+TVRVY L  GNA  IA+I
Sbjct: 261 GTIAFQPMPRMNAVLIVTRNRQLLERATLWLRRLDRSDVSGSTVRVYQLVNGNATRIAKI 320

Query: 184 LNEMFVGRSSAQAGGDNQTSPTAPGQSGTTSRLDSLGSGT 303
           LNE+FVG+ + QA  D+  S  APG S   ++LD L +G+
Sbjct: 321 LNEIFVGKGAGQA-TDSAASQLAPGTSVAQTKLDQLSTGS 359