BLASTX nr result
ID: Glycyrrhiza28_contig00040095
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00040095
(260 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SFK96075.1 PAS domain S-box-containing protein/diguanylate cycla... 131 1e-33
WP_056248841.1 diguanylate cyclase [Methylobacterium sp. Leaf456... 129 4e-33
WP_012453900.1 diguanylate cyclase [Methylobacterium populi] ACB... 128 1e-32
WP_060769609.1 diguanylate cyclase [Methylobacterium sp. AMS5] A... 128 1e-32
WP_056194677.1 diguanylate cyclase [Methylobacterium sp. Leaf123... 128 1e-32
WP_056503832.1 diguanylate cyclase [Methylobacterium sp. Leaf121... 128 1e-32
WP_017485389.1 diguanylate cyclase [Methylobacterium sp. MB200] 128 1e-32
WP_015822592.1 diguanylate cyclase [Methylobacterium extorquens]... 128 1e-32
WP_003598623.1 diguanylate cyclase [Methylobacterium extorquens]... 128 1e-32
WP_012253553.1 MULTISPECIES: diguanylate cyclase [Methylobacteri... 128 1e-32
ACK83153.1 diguanylate cyclase/phosphodiesterase [Methylobacteri... 128 1e-32
BAU90746.1 GAF sensor-containing diguanylate cyclase [Methylobac... 128 1e-32
WP_056119387.1 MULTISPECIES: diguanylate cyclase [Methylobacteri... 127 4e-32
WP_066926885.1 diguanylate cyclase [Methylobacterium sp. CCH5-D2] 118 3e-29
SFM03962.1 PAS domain S-box-containing protein/diguanylate cycla... 118 5e-29
SFJ53553.1 PAS domain S-box-containing protein/diguanylate cycla... 118 5e-29
WP_007560570.1 diguanylate cyclase [Methylobacterium sp. GXF4] E... 118 5e-29
WP_058194360.1 diguanylate cyclase [Methylobacterium sp. GXS13] ... 118 5e-29
WP_056188383.1 MULTISPECIES: diguanylate cyclase [Methylobacteri... 116 2e-28
SFG28971.1 PAS domain S-box-containing protein/diguanylate cycla... 116 2e-28
>SFK96075.1 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF)
domain-containing protein [Methylobacterium salsuginis]
Length = 972
Score = 131 bits (329), Expect = 1e-33
Identities = 68/85 (80%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYK
Sbjct: 137 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_056248841.1 diguanylate cyclase [Methylobacterium sp. Leaf456] KQT46840.1
diguanylate cyclase [Methylobacterium sp. Leaf456]
Length = 968
Score = 129 bits (325), Expect = 4e-33
Identities = 66/85 (77%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 133 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 192
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 193 IIIGISGLLALFLTIIFVVKGAIIF 217
>WP_012453900.1 diguanylate cyclase [Methylobacterium populi] ACB80156.1
diguanylate cyclase/phosphodiesterase with PAS/PAC
sensor(s) [Methylobacterium populi BJ001] OAH17147.1
diguanylate cyclase [Methylobacterium populi]
Length = 970
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 133 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 192
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 193 IIIGIAGLLALFLTIIFVVKGAIIF 217
>WP_060769609.1 diguanylate cyclase [Methylobacterium sp. AMS5] AMB45176.1
diguanylate cyclase [Methylobacterium sp. AMS5]
Length = 976
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_056194677.1 diguanylate cyclase [Methylobacterium sp. Leaf123] KQQ30696.1
diguanylate cyclase [Methylobacterium sp. Leaf123]
Length = 976
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_056503832.1 diguanylate cyclase [Methylobacterium sp. Leaf121] KQQ00426.1
diguanylate cyclase [Methylobacterium sp. Leaf121]
Length = 976
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_017485389.1 diguanylate cyclase [Methylobacterium sp. MB200]
Length = 976
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_015822592.1 diguanylate cyclase [Methylobacterium extorquens] CAX24454.1
diguanylate cyclase (GGDEF domain) /phosphodiesterase
(EAL domain) with PAS/PAC and GAF sensor domains
[Methylobacterium extorquens DM4]
Length = 976
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_003598623.1 diguanylate cyclase [Methylobacterium extorquens] ACS39816.1
diguanylate cyclase (GGDEF domain)/phosphodiesterase
(EAL domain) with PAS/PAC and GAF sensor domains
[Methylobacterium extorquens AM1] EHP93543.1 diguanylate
cyclase/phosphodiesterase with PAS/PAC and
periplasmic/7TM domain sensor(s) [Methylobacterium
extorquens DSM 13060]
Length = 976
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_012253553.1 MULTISPECIES: diguanylate cyclase [Methylobacterium] ABY30428.1
diguanylate cyclase [Methylobacterium extorquens PA1]
KQO78507.1 diguanylate cyclase [Methylobacterium sp.
Leaf90] KQP89162.1 diguanylate cyclase [Methylobacterium
sp. Leaf119] APX87408.1 sensor domain-containing
phosphodiesterase [Methylobacterium extorquens]
Length = 976
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>ACK83153.1 diguanylate cyclase/phosphodiesterase [Methylobacterium extorquens
CM4]
Length = 1050
Score = 128 bits (322), Expect = 1e-32
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 211 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 270
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 271 IIIGIAGLLALFLTIIFVVKGAIIF 295
>BAU90746.1 GAF sensor-containing diguanylate cyclase [Methylobacterium populi]
Length = 976
Score = 128 bits (321), Expect = 1e-32
Identities = 64/85 (75%), Positives = 68/85 (80%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLIT+DPGTTVTYVAELKGPN+PQVYLWDQDAYRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITVDPGTTVTYVAELKGPNIPQVYLWDQDAYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_056119387.1 MULTISPECIES: diguanylate cyclase [Methylobacterium] KQO89010.1
diguanylate cyclase [Methylobacterium sp. Leaf92]
KQQ04421.1 diguanylate cyclase [Methylobacterium sp.
Leaf122]
Length = 976
Score = 127 bits (318), Expect = 4e-32
Identities = 64/85 (75%), Positives = 67/85 (78%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
EGIRPERDESL+ADQFLITIDPGTTVTYVAELKGPN+PQVYLWDQD YRKKT+GLTLYK
Sbjct: 137 EGIRPERDESLDADQFLITIDPGTTVTYVAELKGPNIPQVYLWDQDTYRKKTSGLTLYKG 196
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 197 IIIGIAGLLALFLTIIFVVKGAIIF 221
>WP_066926885.1 diguanylate cyclase [Methylobacterium sp. CCH5-D2]
Length = 957
Score = 118 bits (296), Expect = 3e-29
Identities = 58/85 (68%), Positives = 66/85 (77%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
+GIRPERDE+ EADQF+IT+DPGTT+TYVAEL+GPN+PQV+LWDQDAYRKK AGLTLYK
Sbjct: 126 QGIRPERDENPEADQFVITLDPGTTITYVAELRGPNIPQVHLWDQDAYRKKAAGLTLYKG 185
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 186 IIIGIAGLLALFLTIVFVVKGAIIF 210
>SFM03962.1 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF)
domain-containing protein [Methylobacterium
pseudosasicola]
Length = 960
Score = 118 bits (295), Expect = 5e-29
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
+GIRPERDE+ EADQF IT+DPGTTVTYVAEL+GPNVPQ++LWDQDAYR+KTAGLTLYK
Sbjct: 129 QGIRPERDENPEADQFTITLDPGTTVTYVAELRGPNVPQLHLWDQDAYRRKTAGLTLYKG 188
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 189 IIIGISGLLALFLTIVFVVKGAIIF 213
>SFJ53553.1 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF)
domain-containing protein [Methylobacterium brachiatum]
Length = 972
Score = 118 bits (295), Expect = 5e-29
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
+GIRPERDE+ EADQF IT+DPGTTVTYVAEL+GPNVPQ++LWDQDAYR+KTAGLTLYK
Sbjct: 141 QGIRPERDENPEADQFTITLDPGTTVTYVAELRGPNVPQLHLWDQDAYRRKTAGLTLYKG 200
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 201 IIIGISGLLALFLTIVFVVKGAIIF 225
>WP_007560570.1 diguanylate cyclase [Methylobacterium sp. GXF4] EIZ85906.1 PAS/PAC
sensor-containing diguanylate cyclase/phosphodiesterase
[Methylobacterium sp. GXF4]
Length = 972
Score = 118 bits (295), Expect = 5e-29
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
+GIRPERDE+ EADQF IT+DPGTTVTYVAEL+GPNVPQ++LWDQDAYR+KTAGLTLYK
Sbjct: 141 QGIRPERDENPEADQFTITLDPGTTVTYVAELRGPNVPQLHLWDQDAYRRKTAGLTLYKG 200
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 201 IIIGISGLLALFLTIVFVVKGAIIF 225
>WP_058194360.1 diguanylate cyclase [Methylobacterium sp. GXS13] KST57506.1
diguanylate cyclase [Methylobacterium sp. GXS13]
Length = 976
Score = 118 bits (295), Expect = 5e-29
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
+GIRPERDE+ EADQF IT+DPGTTVTYVAEL+GPNVPQ++LWDQDAYR+KTAGLTLYK
Sbjct: 145 QGIRPERDENPEADQFTITLDPGTTVTYVAELRGPNVPQLHLWDQDAYRRKTAGLTLYKG 204
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 205 IIIGISGLLALFLTIVFVVKGAIIF 229
>WP_056188383.1 MULTISPECIES: diguanylate cyclase [Methylobacterium] KQP74978.1
diguanylate cyclase [Methylobacterium sp. Leaf113]
KQP81054.1 diguanylate cyclase [Methylobacterium sp.
Leaf117]
Length = 965
Score = 116 bits (291), Expect = 2e-28
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
+GIRPERDE+ EADQF+IT+DPG TVTYVAEL+GPN+PQVYLWDQ+AYRKKT GLTLYK
Sbjct: 134 QGIRPERDENPEADQFVITLDPGATVTYVAELQGPNIPQVYLWDQEAYRKKTNGLTLYKG 193
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 194 IIIGIAGLLALFLTIIFVVKGAIIF 218
>SFG28971.1 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF)
domain-containing protein [Methylobacterium
gossipiicola]
Length = 961
Score = 116 bits (290), Expect = 2e-28
Identities = 57/85 (67%), Positives = 65/85 (76%)
Frame = -1
Query: 257 EGIRPERDESLEADQFLITIDPGTTVTYVAELKGPNVPQVYLWDQDAYRKKTAGLTLYKX 78
+GIRPERDE+ EADQF+IT+DPG TVTYVAEL+GPN+PQVYLWDQ+AYRKK+ GLTLYK
Sbjct: 130 QGIRPERDENPEADQFVITLDPGATVTYVAELRGPNIPQVYLWDQEAYRKKSTGLTLYKG 189
Query: 77 XXXXXXXXXXXXXXXXFVVKGAIIF 3
FVVKGAIIF
Sbjct: 190 IIIGIAGLLALFLTIIFVVKGAIIF 214