BLASTX nr result
ID: Glycyrrhiza28_contig00040069
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00040069
(235 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_058757026.1 hypothetical protein [Sphingomonas endophytica] 148 2e-43
KTT62054.1 type VI secretion protein, partial [Sphingomonas endo... 148 2e-43
WP_061979391.1 MULTISPECIES: VirB4 family type IV secretion/conj... 153 1e-41
SCB50195.1 type IV secretion system protein VirB4 [Rhizobium mul... 151 7e-41
WP_019200168.1 VirB4 family type IV secretion/conjugal transfer ... 150 1e-40
CEG10529.1 Type IV secretion system protein virB4 [Afipia felis] 143 3e-40
WP_038357833.1 VirB4 family type IV secretion/conjugal transfer ... 144 1e-38
WP_024921634.1 MULTISPECIES: VirB4 family type IV secretion/conj... 143 4e-38
WP_034462679.1 VirB4 family type IV secretion/conjugal transfer ... 143 4e-38
WP_006023717.1 VirB4 family type IV secretion/conjugal transfer ... 143 4e-38
WP_044407334.1 MULTISPECIES: VirB4 family type IV secretion/conj... 143 5e-38
ODU55110.1 type VI secretion protein [Acetobacteraceae bacterium... 142 9e-38
OJV00514.1 type VI secretion protein [Nitrobacter sp. 62-23] 142 1e-37
OCX32496.1 type VI secretion protein [Bradyrhizobium sp. UASWS1016] 142 1e-37
WP_011505117.1 VirB4 family type IV secretion/conjugal transfer ... 142 1e-37
WP_043854923.1 VirB4 family type IV secretion/conjugal transfer ... 140 6e-37
WP_043855019.1 VirB4 family type IV secretion/conjugal transfer ... 139 8e-37
WP_012564817.1 VirB4 family type IV secretion/conjugal transfer ... 139 1e-36
SDR63779.1 type IV secretion system protein VirB4 [Rhizobiales b... 137 4e-36
WP_069694308.1 VirB4 family type IV secretion/conjugal transfer ... 137 4e-36
>WP_058757026.1 hypothetical protein [Sphingomonas endophytica]
Length = 213
Score = 148 bits (373), Expect = 2e-43
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY+QAFRLSGREV WIRSTA ESRSFLIKHGRDSVVARLNL
Sbjct: 110 LIEQTSTNIFFPNPKADDESYRQAFRLSGREVTWIRSTAPESRSFLIKHGRDSVVARLNL 169
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPDLIKVLSGRTETV
Sbjct: 170 AGMPDLIKVLSGRTETV 186
>KTT62054.1 type VI secretion protein, partial [Sphingomonas endophytica]
Length = 221
Score = 148 bits (373), Expect = 2e-43
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY+QAFRLSGREV WIRSTA ESRSFLIKHGRDSVVARLNL
Sbjct: 118 LIEQTSTNIFFPNPKADDESYRQAFRLSGREVTWIRSTAPESRSFLIKHGRDSVVARLNL 177
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPDLIKVLSGRTETV
Sbjct: 178 AGMPDLIKVLSGRTETV 194
>WP_061979391.1 MULTISPECIES: VirB4 family type IV secretion/conjugal transfer
ATPase [Bradyrhizobium]
Length = 803
Score = 153 bits (387), Expect = 1e-41
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPDLIKVLSGRTETV
Sbjct: 760 AGMPDLIKVLSGRTETV 776
>SCB50195.1 type IV secretion system protein VirB4 [Rhizobium multihospitium]
Length = 803
Score = 151 bits (381), Expect = 7e-41
Identities = 76/77 (98%), Positives = 76/77 (98%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESYKQAFRLSGREV WIRSTAAESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVGWIRSTAAESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPDLIKVLSGRTETV
Sbjct: 760 AGMPDLIKVLSGRTETV 776
>WP_019200168.1 VirB4 family type IV secretion/conjugal transfer ATPase [Afipia
birgiae]
Length = 803
Score = 150 bits (379), Expect = 1e-40
Identities = 76/77 (98%), Positives = 76/77 (98%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESYKQAFRLSGREV WIRSTAAESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVAWIRSTAAESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPDLIKVLSGRTETV
Sbjct: 760 AGMPDLIKVLSGRTETV 776
>CEG10529.1 Type IV secretion system protein virB4 [Afipia felis]
Length = 344
Score = 143 bits (361), Expect = 3e-40
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY+QAFRLSGREV+WIRST ESRSFLIKHGRDSVVARLNL
Sbjct: 241 LIEQTSTNIFFPNPKADDESYRQAFRLSGREVDWIRSTVPESRSFLIKHGRDSVVARLNL 300
Query: 53 AGMPDLIKVLSGRTETV 3
+ MPDLIKVLSGRTETV
Sbjct: 301 SSMPDLIKVLSGRTETV 317
>WP_038357833.1 VirB4 family type IV secretion/conjugal transfer ATPase [Bosea sp.
UNC402CLCol]
Length = 803
Score = 144 bits (364), Expect = 1e-38
Identities = 72/77 (93%), Positives = 74/77 (96%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADD+SY QAFRLSGRE+ WIRSTA ESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDDSYAQAFRLSGREIAWIRSTAPESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPDLIKVLSGRTETV
Sbjct: 760 AGMPDLIKVLSGRTETV 776
>WP_024921634.1 MULTISPECIES: VirB4 family type IV secretion/conjugal transfer
ATPase [Afipia]
Length = 803
Score = 143 bits (361), Expect = 4e-38
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY+QAFRLSGREV+WIRST ESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYRQAFRLSGREVDWIRSTVPESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
+ MPDLIKVLSGRTETV
Sbjct: 760 SSMPDLIKVLSGRTETV 776
>WP_034462679.1 VirB4 family type IV secretion/conjugal transfer ATPase [Afipia sp.
P52-10] ETR79428.1 type VI secretion protein [Afipia sp.
P52-10]
Length = 803
Score = 143 bits (361), Expect = 4e-38
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY+QAFRLSGREV+WIRST ESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYRQAFRLSGREVDWIRSTVPESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
+ MPDLIKVLSGRTETV
Sbjct: 760 SSMPDLIKVLSGRTETV 776
>WP_006023717.1 VirB4 family type IV secretion/conjugal transfer ATPase [Afipia
broomeae] EKS32997.1 VirB4 family type IV
secretion/conjugal transfer ATPase [Afipia broomeae ATCC
49717]
Length = 803
Score = 143 bits (361), Expect = 4e-38
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY+QAFRLSGREV+WIRST ESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYRQAFRLSGREVDWIRSTVPESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
+ MPDLIKVLSGRTETV
Sbjct: 760 SSMPDLIKVLSGRTETV 776
>WP_044407334.1 MULTISPECIES: VirB4 family type IV secretion/conjugal transfer
ATPase [Bradyrhizobiaceae] KIZ46696.1 type VI secretion
protein [Rhodopseudomonas palustris] KQW18082.1 type VI
secretion protein [Afipia sp. Root123D2]
Length = 803
Score = 143 bits (360), Expect = 5e-38
Identities = 72/77 (93%), Positives = 74/77 (96%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY++AFRLSGREV WIRSTA ESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYQKAFRLSGREVAWIRSTAPESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
A MPDLIKVLSGRTETV
Sbjct: 760 ASMPDLIKVLSGRTETV 776
>ODU55110.1 type VI secretion protein [Acetobacteraceae bacterium SCN 69-10]
Length = 803
Score = 142 bits (358), Expect = 9e-38
Identities = 71/77 (92%), Positives = 73/77 (94%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY++AFRLSGREV WIR T ESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYQKAFRLSGREVAWIRGTVPESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPDLIKVLSGRTETV
Sbjct: 760 AGMPDLIKVLSGRTETV 776
>OJV00514.1 type VI secretion protein [Nitrobacter sp. 62-23]
Length = 803
Score = 142 bits (357), Expect = 1e-37
Identities = 71/77 (92%), Positives = 72/77 (93%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESYKQAFRLSGREV WIR T ESRSFLIKHGRDSVVA+LNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVAWIRGTVPESRSFLIKHGRDSVVAKLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
A MPDLIKVLSGRTETV
Sbjct: 760 ASMPDLIKVLSGRTETV 776
>OCX32496.1 type VI secretion protein [Bradyrhizobium sp. UASWS1016]
Length = 803
Score = 142 bits (357), Expect = 1e-37
Identities = 71/77 (92%), Positives = 72/77 (93%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESYKQAFRLSGREV WIR T ESRSFLIKHGRDSVVA+LNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVAWIRGTVPESRSFLIKHGRDSVVAKLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
A MPDLIKVLSGRTETV
Sbjct: 760 ASMPDLIKVLSGRTETV 776
>WP_011505117.1 VirB4 family type IV secretion/conjugal transfer ATPase
[Nitrobacter hamburgensis] ABE65029.1 type IV
secretion/conjugal transfer ATPase, VirB4 family
(plasmid) [Nitrobacter hamburgensis X14]
Length = 803
Score = 142 bits (357), Expect = 1e-37
Identities = 71/77 (92%), Positives = 72/77 (93%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESYKQAFRLSGREV WIR T ESRSFLIKHGRDSVVA+LNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVAWIRGTVPESRSFLIKHGRDSVVAKLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
A MPDLIKVLSGRTETV
Sbjct: 760 ANMPDLIKVLSGRTETV 776
>WP_043854923.1 VirB4 family type IV secretion/conjugal transfer ATPase
[Bradyrhizobium elkanii] KIU53813.1 type VI secretion
protein [Bradyrhizobium elkanii]
Length = 801
Score = 140 bits (352), Expect = 6e-37
Identities = 70/77 (90%), Positives = 72/77 (93%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY++AFRLSGREV WIR T ESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYQKAFRLSGREVAWIRGTVPESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
A MPDLIKVLSGRTETV
Sbjct: 760 ASMPDLIKVLSGRTETV 776
>WP_043855019.1 VirB4 family type IV secretion/conjugal transfer ATPase
[Bradyrhizobium elkanii] KIU53112.1 type VI secretion
protein [Bradyrhizobium elkanii]
Length = 803
Score = 139 bits (351), Expect = 8e-37
Identities = 70/77 (90%), Positives = 71/77 (92%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESYKQAFRLSGREV WIR T ESRSFLIKHGRDSVVA+LNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVAWIRGTVPESRSFLIKHGRDSVVAKLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
A MPDLIK LSGRTETV
Sbjct: 760 ASMPDLIKELSGRTETV 776
>WP_012564817.1 VirB4 family type IV secretion/conjugal transfer ATPase
[Oligotropha carboxidovorans] ACI94793.1 type IV
secretion/conjugal transfer ATPase, VirB4 family
[Oligotropha carboxidovorans OM5] AEI04686.1 type IV
secretion protein VirB4 (plasmid) [Oligotropha
carboxidovorans OM4] AEI08315.1 type IV secretion
protein VirB4 (plasmid) [Oligotropha carboxidovorans
OM5]
Length = 803
Score = 139 bits (350), Expect = 1e-36
Identities = 69/77 (89%), Positives = 72/77 (93%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQTSTNIFFPNPKADDESY++AFRLSGREV WIR T ESRSFLIKHGRDSVVARLNL
Sbjct: 700 LIEQTSTNIFFPNPKADDESYQKAFRLSGREVAWIRGTVPESRSFLIKHGRDSVVARLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
A MPD+IKVLSGRTETV
Sbjct: 760 ASMPDMIKVLSGRTETV 776
>SDR63779.1 type IV secretion system protein VirB4 [Rhizobiales bacterium
GAS113]
Length = 802
Score = 137 bits (346), Expect = 4e-36
Identities = 66/77 (85%), Positives = 73/77 (94%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQT+TN+FFPNPKADDESY +AFRLS REVNWIRS+ ESRSFLIKHGRDSV+A+LNL
Sbjct: 700 LIEQTATNVFFPNPKADDESYARAFRLSEREVNWIRSSVPESRSFLIKHGRDSVIAKLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPD+IKVLSGRTETV
Sbjct: 760 AGMPDIIKVLSGRTETV 776
>WP_069694308.1 VirB4 family type IV secretion/conjugal transfer ATPase [Bosea
vaviloviae] AOO85125.1 type VI secretion protein
(plasmid) [Bosea vaviloviae]
Length = 803
Score = 137 bits (346), Expect = 4e-36
Identities = 68/77 (88%), Positives = 72/77 (93%)
Frame = -3
Query: 233 LIEQTSTNIFFPNPKADDESYKQAFRLSGREVNWIRSTAAESRSFLIKHGRDSVVARLNL 54
LIEQT+TNIFFPNPKADDESY QAFRLS REV WIR+T ESRSFLIKHGRDSV+A+LNL
Sbjct: 700 LIEQTATNIFFPNPKADDESYAQAFRLSEREVAWIRNTVPESRSFLIKHGRDSVIAKLNL 759
Query: 53 AGMPDLIKVLSGRTETV 3
AGMPDLIKVLSGRTETV
Sbjct: 760 AGMPDLIKVLSGRTETV 776