BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00039996
         (348 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_024582639.1 MULTISPECIES: GGDEF domain-containing protein [Br...   158   1e-44
ERF86128.1 diguanylate cyclase (GGDEF) domain-containing protein...   150   9e-42
WP_028339868.1 GGDEF domain-containing protein [Bradyrhizobium e...   150   1e-41
SDF04224.1 diguanylate cyclase (GGDEF) domain-containing protein...   145   7e-40
WP_074128070.1 GGDEF domain-containing protein [Bradyrhizobium s...   145   1e-39
SEC49433.1 diguanylate cyclase (GGDEF) domain-containing protein...   143   5e-39
WP_076828422.1 GGDEF domain-containing protein [Bradyrhizobium s...   143   8e-39
WP_039152123.1 GGDEF domain-containing protein [Bradyrhizobium j...   124   8e-32
WP_014494118.1 GGDEF domain-containing protein [Bradyrhizobium j...   124   8e-32
WP_041954829.1 GGDEF domain-containing protein [Bradyrhizobium j...   120   3e-30
WP_063682422.1 GGDEF domain-containing protein [Bradyrhizobium s...   117   3e-29
WP_071912364.1 GGDEF domain-containing protein [Bradyrhizobium j...   116   9e-29
WP_063982353.1 GGDEF domain-containing protein [Bradyrhizobium s...   116   9e-29
WP_028147508.1 GGDEF domain-containing protein [Bradyrhizobium j...   116   9e-29
WP_027552586.1 GGDEF domain-containing protein [Bradyrhizobium s...   115   2e-28
WP_028158411.1 GGDEF domain-containing protein [Bradyrhizobium j...   114   9e-28
WP_063679281.1 GGDEF domain-containing protein [Bradyrhizobium n...   114   9e-28
SDR88876.1 diguanylate cyclase (GGDEF) domain-containing protein...   107   3e-25
SED43767.1 diguanylate cyclase (GGDEF) domain-containing protein...   104   3e-24
WP_061026744.1 GGDEF domain-containing protein [Bradyrhizobium s...   103   1e-23

>WP_024582639.1 MULTISPECIES: GGDEF domain-containing protein [Bradyrhizobium]
           KIU47588.1 diguanylate cyclase [Bradyrhizobium elkanii]
           OCX28818.1 diguanylate cyclase [Bradyrhizobium sp.
           UASWS1016]
          Length = 405

 Score =  158 bits (399), Expect = 1e-44
 Identities = 78/100 (78%), Positives = 80/100 (80%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSE G+YSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLP                 
Sbjct: 1   MQSEAGQYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPVFAAGAVNTVAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
           T EPTAPFITWL LEI+ICLSRLTVLVIAHRAARERRPTP
Sbjct: 61  THEPTAPFITWLALEIVICLSRLTVLVIAHRAARERRPTP 100


>ERF86128.1 diguanylate cyclase (GGDEF) domain-containing protein
           [Bradyrhizobium sp. DFCI-1]
          Length = 405

 Score =  150 bits (380), Expect = 9e-42
 Identities = 74/100 (74%), Positives = 78/100 (78%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALI DLYGSLP                 
Sbjct: 1   MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIGDLYGSLPVFAAGAVNTVAVSAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            REPTA FITW++LE++ICLSRL VLV AHRAARERRPTP
Sbjct: 61  IREPTAWFITWVILELVICLSRLAVLVAAHRAARERRPTP 100


>WP_028339868.1 GGDEF domain-containing protein [Bradyrhizobium elkanii]
          Length = 405

 Score =  150 bits (379), Expect = 1e-41
 Identities = 73/100 (73%), Positives = 77/100 (77%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSE GRYSQPRWGVTRWLADAGPGVPDDIR ALI DLYGSLP                 
Sbjct: 1   MQSEKGRYSQPRWGVTRWLADAGPGVPDDIRAALIGDLYGSLPVFAAGAVNTVAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            REPTAPFITW++LE++ICLSRL VLV AHRAARERRPTP
Sbjct: 61  IREPTAPFITWVILELVICLSRLAVLVAAHRAARERRPTP 100


>SDF04224.1 diguanylate cyclase (GGDEF) domain-containing protein
           [Bradyrhizobium sp. R5]
          Length = 405

 Score =  145 bits (367), Expect = 7e-40
 Identities = 72/100 (72%), Positives = 76/100 (76%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSE GRYSQPRWGVTRWLADAGPGVPDDIR ALI DLYGSLP                 
Sbjct: 1   MQSEKGRYSQPRWGVTRWLADAGPGVPDDIRAALIGDLYGSLPVFAAGAVNTVAVAAVVA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            REPTA FITW+VLE++ICLSRL VLV+AHRAARE RPTP
Sbjct: 61  IREPTALFITWVVLELVICLSRLAVLVVAHRAARELRPTP 100


>WP_074128070.1 GGDEF domain-containing protein [Bradyrhizobium sp. NAS96.2]
           OKO76632.1 diguanylate cyclase [Bradyrhizobium sp.
           NAS96.2]
          Length = 405

 Score =  145 bits (365), Expect = 1e-39
 Identities = 72/100 (72%), Positives = 75/100 (75%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSE GRY QPRWGVTRWLADAGPGVPDDIR ALI DLYGSLP                 
Sbjct: 1   MQSEKGRYGQPRWGVTRWLADAGPGVPDDIRAALIGDLYGSLPVFAAGAVNTVAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            REPTA FITW+VLE++ICLSRL VLV AHRAARERRPTP
Sbjct: 61  IREPTAWFITWVVLELVICLSRLAVLVAAHRAARERRPTP 100


>SEC49433.1 diguanylate cyclase (GGDEF) domain-containing protein
           [Bradyrhizobium erythrophlei]
          Length = 405

 Score =  143 bits (361), Expect = 5e-39
 Identities = 69/100 (69%), Positives = 74/100 (74%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSE GRYSQPRWGVTRWLADAGPGVPDDIR ALI DLYGSLP                 
Sbjct: 1   MQSEKGRYSQPRWGVTRWLADAGPGVPDDIRSALIGDLYGSLPVFAAGAVNTVAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            REPT PFI W++LE++ICLSRL VL+ AHRAARE RPTP
Sbjct: 61  IREPTTPFIAWVILELVICLSRLAVLLAAHRAAREGRPTP 100


>WP_076828422.1 GGDEF domain-containing protein [Bradyrhizobium sp. UFLA 03-321]
           OMI08128.1 GGDEF domain-containing protein
           [Bradyrhizobium sp. UFLA 03-321]
          Length = 405

 Score =  143 bits (360), Expect = 8e-39
 Identities = 70/100 (70%), Positives = 76/100 (76%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSE GRYSQPRWGV RWLADAGPGVP+DIR ALI DLYGSLP                 
Sbjct: 1   MQSEKGRYSQPRWGVMRWLADAGPGVPEDIRAALIGDLYGSLPVFAAGAVNTVAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            REPTA FITW+VLE++ICLSRL VLV+AHRAARE+RPTP
Sbjct: 61  IREPTALFITWVVLELVICLSRLAVLVVAHRAAREQRPTP 100


>WP_039152123.1 GGDEF domain-containing protein [Bradyrhizobium japonicum]
          Length = 402

 Score =  124 bits (312), Expect = 8e-32
 Identities = 61/100 (61%), Positives = 69/100 (69%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQS+ G YS PRW +TRWLA+ GPGVPDDIR ALIA L+GSLP                 
Sbjct: 1   MQSDEGLYSAPRWRLTRWLAEPGPGVPDDIRAALIAQLHGSLPVFAAGAVNTIAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+PTAPFI WLV+EI+ICL+RL VL  AHR ARE RPTP
Sbjct: 61  ARKPTAPFILWLVMEIVICLARLLVLASAHRRAREHRPTP 100


>WP_014494118.1 GGDEF domain-containing protein [Bradyrhizobium japonicum]
           BAL09266.1 hypothetical protein BJ6T_39920
           [Bradyrhizobium japonicum USDA 6] AJA62249.1 diguanylate
           cyclase [Bradyrhizobium japonicum] KMJ96539.1
           diguanylate cyclase [Bradyrhizobium japonicum]
          Length = 402

 Score =  124 bits (312), Expect = 8e-32
 Identities = 61/100 (61%), Positives = 69/100 (69%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQS+ G YS PRW +TRWLA+ GPGVPDDIR ALIA L+GSLP                 
Sbjct: 1   MQSDEGLYSAPRWRLTRWLAEPGPGVPDDIRAALIAQLHGSLPVFAAGAVNTIAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+PTAPFI WLV+EI+ICL+RL VL  AHR ARE RPTP
Sbjct: 61  ARKPTAPFILWLVMEIVICLARLLVLASAHRRAREHRPTP 100


>WP_041954829.1 GGDEF domain-containing protein [Bradyrhizobium japonicum]
           KGT80174.1 diguanylate cyclase [Bradyrhizobium
           japonicum]
          Length = 402

 Score =  120 bits (301), Expect = 3e-30
 Identities = 60/100 (60%), Positives = 66/100 (66%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQS+ G YS PRW +TRWLA+ GPGVPDDIR ALI  LYGSLP                 
Sbjct: 1   MQSDEGLYSAPRWRLTRWLAEPGPGVPDDIRAALIVQLYGSLPVFAAGAVNTIAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+ TAPFI WLV+EI ICL+RL VLV AHR AR  RPTP
Sbjct: 61  GRKQTAPFIVWLVMEIAICLARLAVLVSAHRRARAHRPTP 100


>WP_063682422.1 GGDEF domain-containing protein [Bradyrhizobium stylosanthis]
          Length = 402

 Score =  117 bits (294), Expect = 3e-29
 Identities = 58/100 (58%), Positives = 68/100 (68%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           M+S+ G YS PRW +TRWLA+ GPGVPDDIR ALIA L+GSLP                 
Sbjct: 1   MRSDEGLYSAPRWRLTRWLAEPGPGVPDDIRAALIAQLHGSLPVFAAGAVNTIAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+ TAPFI WLV+EI+ICL+RL VL  A+R ARE RPTP
Sbjct: 61  ARKQTAPFIVWLVMEIVICLARLLVLASANRRAREHRPTP 100


>WP_071912364.1 GGDEF domain-containing protein [Bradyrhizobium japonicum]
           APG10807.1 GGDEF domain-containing protein
           [Bradyrhizobium japonicum]
          Length = 402

 Score =  116 bits (291), Expect = 9e-29
 Identities = 59/100 (59%), Positives = 65/100 (65%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQS+ G YS PRW +TRWLA+ G GVPDDIR ALI  LYGSLP                 
Sbjct: 1   MQSDEGLYSAPRWRLTRWLAEPGLGVPDDIRAALIVQLYGSLPVFAAGAVNTIAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+ TAPFI WLV+EI ICL+RL VLV AHR AR  RPTP
Sbjct: 61  GRKQTAPFIVWLVMEIAICLARLAVLVSAHRRARAHRPTP 100


>WP_063982353.1 GGDEF domain-containing protein [Bradyrhizobium sp. G22] CUU17202.1
           diguanylate cyclasephosphodiesterase GGDEF EAL domains
           with PASPAC sensors CDS [Bradyrhizobium sp.]
          Length = 402

 Score =  116 bits (291), Expect = 9e-29
 Identities = 59/100 (59%), Positives = 65/100 (65%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQS+ G YS PRW +TRWLA+ G GVPDDIR ALI  LYGSLP                 
Sbjct: 1   MQSDEGLYSAPRWRLTRWLAEPGLGVPDDIRAALIVQLYGSLPVFAAGAVNTIAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+ TAPFI WLV+EI ICL+RL VLV AHR AR  RPTP
Sbjct: 61  GRKQTAPFIVWLVMEIAICLARLAVLVSAHRRARAHRPTP 100


>WP_028147508.1 GGDEF domain-containing protein [Bradyrhizobium japonicum]
          Length = 402

 Score =  116 bits (291), Expect = 9e-29
 Identities = 59/100 (59%), Positives = 65/100 (65%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQS+ G YS PRW +TRWLA+ G GVPDDIR ALI  LYGSLP                 
Sbjct: 1   MQSDEGLYSAPRWRLTRWLAEPGLGVPDDIRAALIVQLYGSLPVFAAGAVNTIAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+ TAPFI WLV+EI ICL+RL VLV AHR AR  RPTP
Sbjct: 61  GRKQTAPFIVWLVMEIAICLARLAVLVSAHRRARAHRPTP 100


>WP_027552586.1 GGDEF domain-containing protein [Bradyrhizobium sp. Cp5.3]
          Length = 403

 Score =  115 bits (289), Expect = 2e-28
 Identities = 59/100 (59%), Positives = 68/100 (68%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSE   YS P+W VTRWLADAGPG P+DIR ALIA L+GSLP                 
Sbjct: 1   MQSEKLLYSLPQWRVTRWLADAGPGAPEDIRTALIAQLHGSLPVFATGAVNTVAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+PTA F++WLVLEI +CLSRLTVL++A RAAR  R TP
Sbjct: 61  IRQPTALFVSWLVLEIAVCLSRLTVLIMALRAARAHRSTP 100


>WP_028158411.1 GGDEF domain-containing protein [Bradyrhizobium japonicum]
          Length = 402

 Score =  114 bits (284), Expect = 9e-28
 Identities = 58/100 (58%), Positives = 64/100 (64%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQS+ G YS PRW +TRWLA+ G GVPDDIR ALI  LYGSLP                 
Sbjct: 1   MQSDEGLYSAPRWRLTRWLAEPGLGVPDDIRAALIVQLYGSLPVFAAGAVNTIAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+ TAPFI WLV+EI ICL+RL VLV AHR A   RPTP
Sbjct: 61  GRKQTAPFIVWLVMEIAICLARLAVLVSAHRRAGAHRPTP 100


>WP_063679281.1 GGDEF domain-containing protein [Bradyrhizobium neotropicale]
           OAF15675.1 diguanylate cyclase [Bradyrhizobium
           neotropicale]
          Length = 403

 Score =  114 bits (284), Expect = 9e-28
 Identities = 58/100 (58%), Positives = 67/100 (67%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQSE   YS P+W VTRWLADAGPG P+DIR ALIA L+GSLP                 
Sbjct: 1   MQSEKLLYSLPQWRVTRWLADAGPGAPEDIRTALIAQLHGSLPVFATGAVNTVAVAAVIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R+PT  F++WLVLEI +CLSRLTVL++A RAAR  R TP
Sbjct: 61  IRQPTPLFVSWLVLEIAVCLSRLTVLIMALRAARAHRSTP 100


>SDR88876.1 diguanylate cyclase (GGDEF) domain-containing protein
           [Bradyrhizobium canariense]
          Length = 405

 Score =  107 bits (267), Expect = 3e-25
 Identities = 55/100 (55%), Positives = 62/100 (62%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           M  E   YS PRWG+ RWL DAGPGVPDDIR ALI  L+GSLP                 
Sbjct: 1   MPIEKKLYSLPRWGIARWLGDAGPGVPDDIRVALIDRLHGSLPVFGAGAINTIAVAAATA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R PTAPF+ WLVLE+ ICL+RL VL+IA+ AA   R TP
Sbjct: 61  IRHPTAPFLAWLVLEVAICLARLVVLLIANSAALAGRRTP 100


>SED43767.1 diguanylate cyclase (GGDEF) domain-containing protein [Rhizobiales
           bacterium GAS191]
          Length = 407

 Score =  104 bits (260), Expect = 3e-24
 Identities = 55/100 (55%), Positives = 63/100 (63%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           M+SET  +S PRW VTRWL DAGPGVPD+IR ALIA L+G+LP                 
Sbjct: 1   MRSETRIFSLPRWRVTRWLTDAGPGVPDEIRAALIASLFGTLPVFAGGLVNTLVVSAAIA 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R PT PFI WLVLEI I ++RL VL+ A RAA   R TP
Sbjct: 61  ARLPTPPFIAWLVLEIAIGVARLIVLIAARRAALAGRETP 100


>WP_061026744.1 GGDEF domain-containing protein [Bradyrhizobium sp. CCH5-F6]
          Length = 405

 Score =  103 bits (256), Expect = 1e-23
 Identities = 51/100 (51%), Positives = 61/100 (61%)
 Frame = +2

Query: 47  MQSETGRYSQPRWGVTRWLADAGPGVPDDIRQALIADLYGSLPXXXXXXXXXXXXXXXXX 226
           MQS+   YS PRW VTRWLAD G  VP+DIR ALI +LYG+LP                 
Sbjct: 1   MQSDASIYSLPRWRVTRWLADCGADVPEDIRLALIGNLYGTLPVFIGGILNSLLVAAAIT 60

Query: 227 TREPTAPFITWLVLEILICLSRLTVLVIAHRAARERRPTP 346
            R PT  F+ WL +EI ICL+RL VL+IA R A + +PTP
Sbjct: 61  ARSPTPLFVAWLAVEIAICLTRLAVLIIARRRALKHQPTP 100