BLASTX nr result
ID: Glycyrrhiza28_contig00039935
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00039935
(399 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERF82197.1 transcription-repair coupling factor (superfamily II ... 231 3e-75
WP_011505169.1 cytochrome c [Nitrobacter hamburgensis] ABE64977.... 172 4e-52
WP_011505276.1 cytochrome c [Nitrobacter hamburgensis] ABE65196.... 169 7e-51
WP_044409091.1 MULTISPECIES: cytochrome c [Bradyrhizobiaceae] KI... 167 6e-50
OJU18465.1 cytochrome C [Afipia sp. 62-7] 162 2e-48
SDE63805.1 Cytochrome C oxidase, cbb3-type, subunit III [Massili... 154 4e-45
ALK99677.1 cytochrome C [Massilia sp. WG5] 154 6e-45
WP_075791982.1 cytochrome C [Massilia putida] 154 1e-44
WP_063817267.1 MULTISPECIES: cytochrome C [Bradyrhizobium] 153 3e-44
WP_061022328.1 hypothetical protein [Bradyrhizobium sp. CCH5-F6] 147 7e-43
WP_063817233.1 MULTISPECIES: cytochrome C [Bradyrhizobium] 147 2e-42
ODT86091.1 cytochrome C [Nitrosomonadales bacterium SCN 54-20] 145 9e-42
SCY09683.1 Cytochrome C oxidase, cbb3-type, subunit III [Nitroso... 144 3e-41
ODV14658.1 cytochrome C [Rhodanobacter sp. SCN 68-63] 143 1e-40
WP_063573309.1 cytochrome C [Luteibacter rhizovicinus] 141 2e-40
OHC48945.1 DUF4440 domain-containing protein, partial [Rhodanoba... 140 5e-39
ODU66984.1 DUF4440 domain-containing protein [Rhodanobacter sp. ... 142 6e-39
KDR28414.1 cytochrome C [Caballeronia zhejiangensis] 139 7e-39
KAK47029.1 cytochrome C [Caballeronia jiangsuensis] 139 7e-39
WP_056005470.1 cytochrome c [Frateuria sp. Soil773] KRE89366.1 c... 138 7e-39
>ERF82197.1 transcription-repair coupling factor (superfamily II helicase)
[Bradyrhizobium sp. DFCI-1]
Length = 202
Score = 231 bits (588), Expect = 3e-75
Identities = 113/126 (89%), Positives = 113/126 (89%)
Frame = -3
Query: 379 MTRRXXXXXXXXXXXXXGILFYVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIE 200
MTRR GILFYVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIE
Sbjct: 1 MTRRLGVAVLAAVALFGGILFYVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIE 60
Query: 199 LPDLQDEQLVLKGAGQYAAMCVNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVT 20
LPDLQDEQLVLKGAGQYAAMCVNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVT
Sbjct: 61 LPDLQDEQLVLKGAGQYAAMCVNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVT 120
Query: 19 KHGLKM 2
KHGLKM
Sbjct: 121 KHGLKM 126
>WP_011505169.1 cytochrome c [Nitrobacter hamburgensis] ABE64977.1 cytochrome c
family protein (plasmid) [Nitrobacter hamburgensis X14]
Length = 206
Score = 172 bits (436), Expect = 4e-52
Identities = 79/105 (75%), Positives = 91/105 (86%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G YDVGADTPHW +TR++ME VR+R+IAVRA I++PDL EQL+LKGAGQYAAMC
Sbjct: 22 FVFSGVYDVGADTPHWTLTRKIMEIVRDRAIAVRAKDIQVPDLTGEQLILKGAGQYAAMC 81
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
+CHLAP +S+SEIRPGLYPKPP LSE FDPKTVFWVTKHGLKM
Sbjct: 82 ADCHLAPGKSESEIRPGLYPKPPKLSEHPFDPKTVFWVTKHGLKM 126
>WP_011505276.1 cytochrome c [Nitrobacter hamburgensis] ABE65196.1 cytochrome c
family protein (plasmid) [Nitrobacter hamburgensis X14]
Length = 205
Score = 169 bits (428), Expect = 7e-51
Identities = 77/105 (73%), Positives = 90/105 (85%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G YDVGADTPHW +TR+++E VR+R+IAVRA I++PDL EQL+LKGAGQYAAMC
Sbjct: 22 FVFSGVYDVGADTPHWTLTRKIIEIVRDRAIAVRANDIQVPDLTGEQLILKGAGQYAAMC 81
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
+CHLAP +S+SEIRPGLYPKPP LSE DPKTVFWVTKHGLKM
Sbjct: 82 ADCHLAPGKSESEIRPGLYPKPPKLSEHPIDPKTVFWVTKHGLKM 126
>WP_044409091.1 MULTISPECIES: cytochrome c [Bradyrhizobiaceae] KIZ44809.1
cytochrome C [Rhodopseudomonas palustris] KQW18029.1
cytochrome C [Afipia sp. Root123D2]
Length = 207
Score = 167 bits (422), Expect = 6e-50
Identities = 74/105 (70%), Positives = 90/105 (85%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
++ G Y++GAD PHW IT +V+E R+R+IAVRA I++PDL DEQL+LKGAGQYAAMC
Sbjct: 22 FIVSGAYEIGADVPHWNITSKVLEAARDRAIAVRARDIKVPDLADEQLILKGAGQYAAMC 81
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
V CHLAP +SDSEIRPGLYP+PPNLS+ + DP+TVFWVTKHGLKM
Sbjct: 82 VGCHLAPGKSDSEIRPGLYPQPPNLSQTKLDPRTVFWVTKHGLKM 126
>OJU18465.1 cytochrome C [Afipia sp. 62-7]
Length = 203
Score = 162 bits (411), Expect = 2e-48
Identities = 76/106 (71%), Positives = 84/106 (79%)
Frame = -3
Query: 319 FYVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAM 140
FYV G YD GADTPHW +TR V+ET R+ SIAVR I +PD DE+LVLKGAGQYAAM
Sbjct: 21 FYVVSGAYDFGADTPHWALTRVVIETFRDHSIAVRTRDIVVPDFGDEKLVLKGAGQYAAM 80
Query: 139 CVNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CVNCHLAP DSEIRPGLYP+PPNLSE+R DP FW+ KHGLKM
Sbjct: 81 CVNCHLAPGMKDSEIRPGLYPQPPNLSEKRVDPARAFWIVKHGLKM 126
>SDE63805.1 Cytochrome C oxidase, cbb3-type, subunit III [Massilia sp. PDC64]
Length = 209
Score = 154 bits (390), Expect = 4e-45
Identities = 69/105 (65%), Positives = 84/105 (80%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
Y+ G+YD+GAD PHW IT V+E +R RSI RA I++PDL ++QL+LKGAGQYAAMC
Sbjct: 25 YIYAGWYDIGADRPHWRITTSVIEMLRTRSIERRAAEIKVPDLTNQQLILKGAGQYAAMC 84
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CHLAP +SDSEIRPGLYP+PP LS+ R DP+ FWVTKHG+KM
Sbjct: 85 TQCHLAPGKSDSEIRPGLYPQPPELSKIRVDPRIAFWVTKHGVKM 129
>ALK99677.1 cytochrome C [Massilia sp. WG5]
Length = 196
Score = 154 bits (388), Expect = 6e-45
Identities = 67/105 (63%), Positives = 84/105 (80%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
Y+ G+Y++GAD PHW +T V+ET+R RSI RA I++P+L D+QL+LKGAGQYAAMC
Sbjct: 25 YIYAGWYNIGADRPHWSLTTAVIETLRERSIERRAAEIKVPNLTDQQLILKGAGQYAAMC 84
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CHLAP S SEIRPGLYP+PP+LS+ R DP+ FWVTKHG+KM
Sbjct: 85 TQCHLAPGNSSSEIRPGLYPRPPDLSKVRIDPRVAFWVTKHGIKM 129
>WP_075791982.1 cytochrome C [Massilia putida]
Length = 213
Score = 154 bits (388), Expect = 1e-44
Identities = 67/105 (63%), Positives = 84/105 (80%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
Y+ G+Y++GAD PHW +T V+ET+R RSI RA I++P+L D+QL+LKGAGQYAAMC
Sbjct: 28 YIYAGWYNIGADRPHWSLTTAVIETLRERSIERRAAEIKVPNLTDQQLILKGAGQYAAMC 87
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CHLAP S SEIRPGLYP+PP+LS+ R DP+ FWVTKHG+KM
Sbjct: 88 TQCHLAPGNSSSEIRPGLYPRPPDLSKVRIDPRVAFWVTKHGIKM 132
>WP_063817267.1 MULTISPECIES: cytochrome C [Bradyrhizobium]
Length = 224
Score = 153 bits (386), Expect = 3e-44
Identities = 66/107 (61%), Positives = 83/107 (77%)
Frame = -3
Query: 322 LFYVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAA 143
+ ++ G YD+GADTPHW +TR++ME R RSIA RA + +P+L DEQ +LKGAGQYAA
Sbjct: 20 VLFITSGTYDIGADTPHWALTRQIMEVTRERSIAARATSLTIPNLSDEQRILKGAGQYAA 79
Query: 142 MCVNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
MCVNCH AP + D+E+ GLYPKPPNL + D KT+FWVTKHG+KM
Sbjct: 80 MCVNCHSAPGKPDTELGEGLYPKPPNLYQMSLDAKTIFWVTKHGIKM 126
>WP_061022328.1 hypothetical protein [Bradyrhizobium sp. CCH5-F6]
Length = 171
Score = 147 bits (372), Expect = 7e-43
Identities = 69/105 (65%), Positives = 79/105 (75%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G YDVGADTPHW TR +E R+RSIAV A + P+L DE+LVLKGAGQYAAMC
Sbjct: 22 FVASGAYDVGADTPHWPATRATIELFRDRSIAVCARSVNPPNLADERLVLKGAGQYAAMC 81
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
NCHLAP +SE+R GLYP+PPNLS DP+T FWV KHGLKM
Sbjct: 82 ANCHLAPGIPESELRQGLYPRPPNLSRYPVDPRTAFWVVKHGLKM 126
>WP_063817233.1 MULTISPECIES: cytochrome C [Bradyrhizobium]
Length = 198
Score = 147 bits (371), Expect = 2e-42
Identities = 64/107 (59%), Positives = 79/107 (73%)
Frame = -3
Query: 322 LFYVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAA 143
+ ++ G YD+GADTPHW +TR++ME R RSIA R + PDL DEQ +LKGAGQYAA
Sbjct: 20 IVFITSGTYDIGADTPHWALTRQIMELTRERSIAARTASLTSPDLSDEQGILKGAGQYAA 79
Query: 142 MCVNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
MC NCH P + D+E+ GLYPKPP+LSE D K +FWVTKHG+KM
Sbjct: 80 MCANCHSEPGKPDTELGEGLYPKPPSLSETSLDAKAIFWVTKHGIKM 126
>ODT86091.1 cytochrome C [Nitrosomonadales bacterium SCN 54-20]
Length = 185
Score = 145 bits (366), Expect = 9e-42
Identities = 67/105 (63%), Positives = 78/105 (74%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
Y+ G YD+GAD PHW IT +++ETVR RSI RA I P L+ +LVLKGAGQYAAMC
Sbjct: 26 YIYSGLYDIGADIPHWPITEKIVETVRVRSIESRAKNIIPPKLESPRLVLKGAGQYAAMC 85
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
+CHLAP SDSEIR GLYP+PPNL+ DPK FWV KHG+KM
Sbjct: 86 ADCHLAPGMSDSEIRQGLYPQPPNLTRVSIDPKVAFWVIKHGIKM 130
>SCY09683.1 Cytochrome C oxidase, cbb3-type, subunit III [Nitrosospira sp. Nl5]
Length = 186
Score = 144 bits (363), Expect = 3e-41
Identities = 64/105 (60%), Positives = 80/105 (76%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
Y+ G YD+ AD PHW IT +++ET+R RSI +RA IE+P+L+ +LVL+GAG+YAAMC
Sbjct: 21 YIYAGIYDIAADKPHWPITTKILETLRQRSIEIRAADIEVPELETPRLVLQGAGEYAAMC 80
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CHLAP +S IR GLYPKPP+LSE R DPK FWV KHG+KM
Sbjct: 81 RGCHLAPGAEESAIRLGLYPKPPDLSEVRIDPKLAFWVIKHGIKM 125
>ODV14658.1 cytochrome C [Rhodanobacter sp. SCN 68-63]
Length = 198
Score = 143 bits (360), Expect = 1e-40
Identities = 66/105 (62%), Positives = 77/105 (73%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G YD+GADTPH +M+T+R RSI A + +PDL D QLVLKGAGQYAAMC
Sbjct: 26 FVWSGRYDIGADTPHTRPVFALMQTLRERSIRTHAADLAVPDLTDPQLVLKGAGQYAAMC 85
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CHL+P +DSEIRPGLYP+PPNLS R DPK FWV KHG+KM
Sbjct: 86 TQCHLSPAMADSEIRPGLYPQPPNLSRVRVDPKQAFWVIKHGIKM 130
>WP_063573309.1 cytochrome C [Luteibacter rhizovicinus]
Length = 174
Score = 141 bits (356), Expect = 2e-40
Identities = 64/105 (60%), Positives = 78/105 (74%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G Y++GAD PH + T V+ET+R RSI A I++PDL D QL+LKGAGQYAAMC
Sbjct: 9 FVYSGAYNIGADDPHSKATYAVLETLRRRSIQAHASGIKVPDLSDPQLILKGAGQYAAMC 68
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CHL P Q DSE+RPGLYP+PPNLS+ R +P FWV KHG+KM
Sbjct: 69 TECHLKPGQKDSELRPGLYPQPPNLSQTRVEPAQAFWVIKHGIKM 113
>OHC48945.1 DUF4440 domain-containing protein, partial [Rhodanobacter sp.
RIFOXYA1_FULL_67_6]
Length = 263
Score = 140 bits (354), Expect = 5e-39
Identities = 64/105 (60%), Positives = 77/105 (73%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G YD+GAD PH + VM+ +R RS+ V + I++PDL DEQL+LKGAGQYAAMC
Sbjct: 26 FVYSGLYDIGADAPHTKPVFAVMQAMRERSVEVHSKDIQVPDLNDEQLILKGAGQYAAMC 85
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CHL P DSEIRPGLYP+PPNLS+ R PK FWV KHG+KM
Sbjct: 86 TECHLKPGGKDSEIRPGLYPQPPNLSQVRIAPKEAFWVIKHGIKM 130
>ODU66984.1 DUF4440 domain-containing protein [Rhodanobacter sp. SCN 65-17]
Length = 342
Score = 142 bits (359), Expect = 6e-39
Identities = 62/105 (59%), Positives = 83/105 (79%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G Y++GAD H ++ ++T+R+RSI +R+ I++PDL+D QL+LKGAGQYAAMC
Sbjct: 26 FVYSGLYNIGADDHHTKLVHSALQTLRDRSIHMRSQDIKVPDLEDPQLILKGAGQYAAMC 85
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
CHL P Q+DSEIRPGLYP+PPNL+++R DPK FWV KHG+KM
Sbjct: 86 TQCHLTPGQTDSEIRPGLYPQPPNLAQERVDPKDAFWVIKHGVKM 130
>KDR28414.1 cytochrome C [Caballeronia zhejiangensis]
Length = 211
Score = 139 bits (349), Expect = 7e-39
Identities = 60/105 (57%), Positives = 79/105 (75%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G Y++GAD PHW +T ++++T+R RSI + I LPDL +L+LKGAGQYAAMC
Sbjct: 22 FVLSGSYNMGADAPHWSLTYKILQTLRMRSIEAHSKDIALPDLNSPELILKGAGQYAAMC 81
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
V CHLAP DSE+ PGLYP+PP L++ + DP++ FWV KHGLKM
Sbjct: 82 VTCHLAPGVKDSELAPGLYPQPPELAKSQLDPRSAFWVIKHGLKM 126
>KAK47029.1 cytochrome C [Caballeronia jiangsuensis]
Length = 211
Score = 139 bits (349), Expect = 7e-39
Identities = 58/105 (55%), Positives = 79/105 (75%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPDLQDEQLVLKGAGQYAAMC 137
+V G Y++GAD PHW +T ++++T+R RS+ A + LPDL D +L+L+GAGQYAAMC
Sbjct: 22 FVLSGSYNMGADAPHWPLTYKILQTLRMRSVEAHAKDLALPDLNDSKLILRGAGQYAAMC 81
Query: 136 VNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
V CHLAP DSE+ PGLYP+PP L+ + DP++ FW+ KHGLKM
Sbjct: 82 VTCHLAPGVKDSELAPGLYPQPPELATMQLDPRSTFWIVKHGLKM 126
>WP_056005470.1 cytochrome c [Frateuria sp. Soil773] KRE89366.1 cytochrome C
[Frateuria sp. Soil773]
Length = 199
Score = 138 bits (348), Expect = 7e-39
Identities = 62/106 (58%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = -3
Query: 316 YVGYGFYDVGADTPHWEITRRVMETVRNRSIAVRAGRIELPD-LQDEQLVLKGAGQYAAM 140
+V G+YD GAD PHWE T R+++ R RS+A A + LPD L DE +L+GAGQYAAM
Sbjct: 18 FVASGWYDAGADRPHWEATYRLLQFARERSVAQHAKDLVLPDNLDDEATILEGAGQYAAM 77
Query: 139 CVNCHLAPEQSDSEIRPGLYPKPPNLSEQRFDPKTVFWVTKHGLKM 2
C CHLAP DSE+RPGLYP+PP+LS R DP+ FW KHG+KM
Sbjct: 78 CTGCHLAPGMDDSELRPGLYPQPPDLSRTRVDPRAAFWTIKHGIKM 123