BLASTX nr result
ID: Glycyrrhiza28_contig00039752
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00039752
(270 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium ... 172 3e-48
WP_063987526.1 Ti-type conjugative transfer relaxase TraA [Methy... 133 2e-34
WP_073140453.1 Ti-type conjugative transfer relaxase TraA [Roseo... 120 6e-30
WP_052402551.1 Ti-type conjugative transfer relaxase TraA [Roseo... 118 5e-29
WP_062446217.1 conjugal transfer protein TraA [Gluconobacter oxy... 112 8e-27
WP_056440450.1 conjugal transfer protein TraA [Caulobacter sp. R... 111 1e-26
WP_066826819.1 conjugal transfer protein TraA [Sphingomonas mali] 111 1e-26
WP_012285209.1 conjugal transfer protein TrbA [Caulobacter sp. K... 111 1e-26
WP_041247983.1 conjugal transfer protein TraA [Komagataeibacter ... 110 2e-26
WP_010517488.1 Ti-type conjugative transfer relaxase TraA [Komag... 110 3e-26
WP_012284420.1 conjugal transfer protein TrbA [Caulobacter sp. K... 110 3e-26
WP_019088721.1 conjugal transfer protein TrbA [Acetobacter paste... 110 3e-26
WP_063355081.1 Ti-type conjugative transfer relaxase TraA [Aceto... 110 3e-26
SHK31877.1 Ti-type conjugative transfer relaxase TraA [Roseomona... 110 3e-26
WP_073139672.1 Ti-type conjugative transfer relaxase TraA [Roseo... 110 3e-26
WP_061487277.1 conjugal transfer protein TraA [Acetobacter tropi... 110 4e-26
WP_031309333.1 conjugal transfer protein TraA [Sphingobium sp. C... 109 5e-26
ETI63973.1 conjugal transfer protein TrbA [Sphingobium sp. C100] 109 5e-26
WP_071406650.1 Ti-type conjugative transfer relaxase TraA, parti... 108 6e-26
WP_039733695.1 Ti-type conjugative transfer relaxase TraA, parti... 108 7e-26
>WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium extorquens]
ACS44173.1 Conjugal transfer protein TraA (plasmid)
[Methylobacterium extorquens AM1]
Length = 964
Score = 172 bits (437), Expect = 3e-48
Identities = 89/89 (100%), Positives = 89/89 (100%)
Frame = -3
Query: 268 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 89
AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL
Sbjct: 229 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 288
Query: 88 VRLGQDARGQERFTTRMMLGIEARMEQAA 2
VRLGQDARGQERFTTRMMLGIEARMEQAA
Sbjct: 289 VRLGQDARGQERFTTRMMLGIEARMEQAA 317
>WP_063987526.1 Ti-type conjugative transfer relaxase TraA [Methylobacterium
populi] BAU94019.1 conjugal transfer relaxase TraA
(plasmid) [Methylobacterium populi] OAH27958.1 conjugal
transfer protein TraA [Methylobacterium populi]
Length = 985
Score = 133 bits (335), Expect = 2e-34
Identities = 67/89 (75%), Positives = 75/89 (84%)
Frame = -3
Query: 268 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 89
AIAARNG+RIAA+P IAL LT Q STF RQDLAR IHRHSDGE QFT +MAKVEASPE+
Sbjct: 229 AIAARNGERIAAEPEIALRTLTHQHSTFMRQDLARFIHRHSDGEVQFTSVMAKVEASPEI 288
Query: 88 VRLGQDARGQERFTTRMMLGIEARMEQAA 2
VRLG+D RG+ERFTTR M+ E RME+AA
Sbjct: 289 VRLGEDERGRERFTTREMIATEERMERAA 317
>WP_073140453.1 Ti-type conjugative transfer relaxase TraA [Roseomonas rosea]
SHK46485.1 Ti-type conjugative transfer relaxase TraA
[Roseomonas rosea]
Length = 1123
Score = 120 bits (302), Expect = 6e-30
Identities = 61/89 (68%), Positives = 71/89 (79%)
Frame = -3
Query: 268 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 89
AIA RNG+RIAADP +AL ALT+Q STFTRQDLAR + RH+DG QF ++A VEA+P+
Sbjct: 229 AIARRNGERIAADPALALDALTRQQSTFTRQDLARFVSRHTDGAEQFGQVVAVVEAAPDT 288
Query: 88 VRLGQDARGQERFTTRMMLGIEARMEQAA 2
VRLGQD RG+ERFTTR ML E RME AA
Sbjct: 289 VRLGQDGRGRERFTTRDMLAAERRMEDAA 317
>WP_052402551.1 Ti-type conjugative transfer relaxase TraA [Roseomonas aerilata]
Length = 1045
Score = 118 bits (295), Expect = 5e-29
Identities = 59/87 (67%), Positives = 71/87 (81%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNG+RIAADP++AL ALT+Q STFTR DLAR + RH+DG QF +MAKVEASPELV
Sbjct: 189 IARRNGERIAADPSVALDALTRQQSTFTRHDLARFVSRHTDGAEQFGQVMAKVEASPELV 248
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQA 5
R+G+D RG+ERF+T+ ML E RME A
Sbjct: 249 RVGEDGRGRERFSTQGMLVAEQRMEAA 275
>WP_062446217.1 conjugal transfer protein TraA [Gluconobacter oxydans] KXV16681.1
conjugal transfer protein TraA [Gluconobacter oxydans]
Length = 1028
Score = 112 bits (279), Expect = 8e-27
Identities = 53/88 (60%), Positives = 69/88 (78%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNGDR+ A+P +AL ALT+Q STFTRQDLAR + RH+ QF+ +M +VEA PELV
Sbjct: 230 IARRNGDRLLAEPYVALEALTRQQSTFTRQDLARFVDRHTADAEQFSAVMVRVEACPELV 289
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LG+D GQERF+TR M+G+E R+E+A+
Sbjct: 290 ALGKDGHGQERFSTRAMIGVEQRLEEAS 317
>WP_056440450.1 conjugal transfer protein TraA [Caulobacter sp. Root1455]
KQY95926.1 conjugal transfer protein TraA [Caulobacter
sp. Root1455]
Length = 957
Score = 111 bits (278), Expect = 1e-26
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA NG+RI ADP IAL A+T+Q +TFTR+DLA +HRHSDG+ QF M V+ASPELV
Sbjct: 230 IARANGERIIADPRIALDAITKQQATFTRRDLAMFMHRHSDGKEQFDRAMGAVQASPELV 289
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LGQD RGQ+RFT+R M+ +E R+ +AA
Sbjct: 290 ALGQDGRGQDRFTSREMIAVEDRLHRAA 317
>WP_066826819.1 conjugal transfer protein TraA [Sphingomonas mali]
Length = 937
Score = 111 bits (277), Expect = 1e-26
Identities = 54/89 (60%), Positives = 69/89 (77%)
Frame = -3
Query: 268 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 89
AIA NG+RI ADP IAL A+T+Q +TFTR+DLA +HRHSDG+ QF +M V A+PEL
Sbjct: 229 AIARANGERIIADPNIALDAITRQQATFTRRDLAMFVHRHSDGKEQFDRVMGAVRAAPEL 288
Query: 88 VRLGQDARGQERFTTRMMLGIEARMEQAA 2
V LG+D RG+ERFT+R M+ E R+E+AA
Sbjct: 289 VALGKDGRGEERFTSRDMIETERRLERAA 317
>WP_012285209.1 conjugal transfer protein TrbA [Caulobacter sp. K31] ABZ70282.1
Ti-type conjugative transfer relaxase TraA [Caulobacter
sp. K31]
Length = 952
Score = 111 bits (277), Expect = 1e-26
Identities = 53/88 (60%), Positives = 68/88 (77%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA NG+RI ADP IAL A+T+Q +TFTR+DLA +HRHSDG+ QF M V+ASPELV
Sbjct: 230 IARANGERIIADPRIALDAITKQQATFTRRDLAMFVHRHSDGKEQFDRAMGAVQASPELV 289
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LGQD RGQ+RFT+R M+ +E R+ +A+
Sbjct: 290 ALGQDGRGQDRFTSREMIAVEDRLHRAS 317
>WP_041247983.1 conjugal transfer protein TraA [Komagataeibacter medellinensis]
Length = 1029
Score = 110 bits (276), Expect = 2e-26
Identities = 52/88 (59%), Positives = 70/88 (79%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNG+R+ A+P +AL ALT+Q STFTRQDLAR + RH+ AQF+ +M +VEA PELV
Sbjct: 230 IARRNGERLLAEPHVALEALTRQQSTFTRQDLARFVDRHTADAAQFSAVMVRVEACPELV 289
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LG+D G+ERF+TR M+G+E R+E+A+
Sbjct: 290 ALGKDGHGRERFSTRAMIGVEQRLEEAS 317
>WP_010517488.1 Ti-type conjugative transfer relaxase TraA [Komagataeibacter
oboediens]
Length = 892
Score = 110 bits (275), Expect = 3e-26
Identities = 52/88 (59%), Positives = 70/88 (79%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNG+R+ A+P +AL ALT+Q STFTRQDLAR + RH+ AQF+ +M +VEA PELV
Sbjct: 95 IARRNGERLLAEPHVALEALTRQQSTFTRQDLARFVDRHTADAAQFSAVMVRVEACPELV 154
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LG+D G+ERF+TR M+G+E R+E+A+
Sbjct: 155 ALGKDGHGRERFSTREMIGVEQRLEEAS 182
>WP_012284420.1 conjugal transfer protein TrbA [Caulobacter sp. K31] ABZ69463.1
Ti-type conjugative transfer relaxase TraA [Caulobacter
sp. K31]
Length = 952
Score = 110 bits (275), Expect = 3e-26
Identities = 53/88 (60%), Positives = 68/88 (77%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA NG+RI ADP IAL A+T+Q +TFTR+DLA IHRHSDG+ QF M V+ASPE+V
Sbjct: 230 IARANGERIIADPRIALDAITKQQATFTRRDLAMFIHRHSDGKDQFDRAMGAVQASPEMV 289
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LGQD RGQ+RFT+R M+ +E R+ +A+
Sbjct: 290 ALGQDGRGQDRFTSREMIAVEDRLHRAS 317
>WP_019088721.1 conjugal transfer protein TrbA [Acetobacter pasteurianus]
Length = 1028
Score = 110 bits (275), Expect = 3e-26
Identities = 52/88 (59%), Positives = 69/88 (78%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNGDR+ A+P +AL ALT+Q STFTRQDLAR + RH+ QF+ +M +VEA PELV
Sbjct: 230 IARRNGDRLLAEPHVALEALTRQQSTFTRQDLARFVDRHTADAEQFSAVMVRVEACPELV 289
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LG+D G+ERF+TR M+G+E R+E+A+
Sbjct: 290 ALGKDGHGRERFSTRAMIGVEQRLEEAS 317
>WP_063355081.1 Ti-type conjugative transfer relaxase TraA [Acetobacter sp. SLV-7]
ANA15390.1 conjugal transfer protein TraA (plasmid)
[Acetobacter sp. SLV-7]
Length = 1030
Score = 110 bits (275), Expect = 3e-26
Identities = 52/88 (59%), Positives = 69/88 (78%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNG+R+ A+P +AL ALT+Q STFTRQDLAR + RH+ QFT +M +VEA PELV
Sbjct: 230 IARRNGERLLAEPHVALEALTRQQSTFTRQDLARFVDRHTADAEQFTAVMVRVEACPELV 289
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LG+D G+ERF+TR M+G+E R+E+A+
Sbjct: 290 ALGKDGHGRERFSTRAMIGVEQRLEEAS 317
>SHK31877.1 Ti-type conjugative transfer relaxase TraA [Roseomonas rosea]
Length = 1078
Score = 110 bits (275), Expect = 3e-26
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = -3
Query: 268 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 89
AIA RNG+R+ A+P AL LT Q STFT+ DLARL+ RH+DG QF ++A+VEASPEL
Sbjct: 192 AIARRNGERLLAEPERALEILTHQQSTFTQHDLARLVARHTDGAEQFGQVLARVEASPEL 251
Query: 88 VRLGQDARGQERFTTRMMLGIEARMEQAA 2
VRLG+D RGQER TTR ML E R+E+ A
Sbjct: 252 VRLGRDGRGQERLTTRAMLETERRLERDA 280
>WP_073139672.1 Ti-type conjugative transfer relaxase TraA [Roseomonas rosea]
Length = 1115
Score = 110 bits (275), Expect = 3e-26
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = -3
Query: 268 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 89
AIA RNG+R+ A+P AL LT Q STFT+ DLARL+ RH+DG QF ++A+VEASPEL
Sbjct: 229 AIARRNGERLLAEPERALEILTHQQSTFTQHDLARLVARHTDGAEQFGQVLARVEASPEL 288
Query: 88 VRLGQDARGQERFTTRMMLGIEARMEQAA 2
VRLG+D RGQER TTR ML E R+E+ A
Sbjct: 289 VRLGRDGRGQERLTTRAMLETERRLERDA 317
>WP_061487277.1 conjugal transfer protein TraA [Acetobacter tropicalis] KXV60733.1
conjugal transfer protein TraA [Acetobacter tropicalis]
Length = 1029
Score = 110 bits (274), Expect = 4e-26
Identities = 52/88 (59%), Positives = 69/88 (78%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNG+R+ A+P +AL ALT+Q STFTRQDLAR + RH+ QFT +M +VEA PELV
Sbjct: 230 IARRNGERLLAEPHVALEALTRQQSTFTRQDLARFVDRHTADAEQFTAVMVRVEACPELV 289
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LG+D G+ERF+TR M+G+E R+E+A+
Sbjct: 290 ALGKDGHGRERFSTREMIGVEQRLEEAS 317
>WP_031309333.1 conjugal transfer protein TraA [Sphingobium sp. C100]
Length = 998
Score = 109 bits (273), Expect = 5e-26
Identities = 50/89 (56%), Positives = 69/89 (77%)
Frame = -3
Query: 268 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 89
A+A RNG+RI ADP++AL A+T Q +TFTR+D+A +HRH+DG+ QF M+ V ASPEL
Sbjct: 234 ALAQRNGERIIADPSVALNAITHQQATFTRRDMAMFVHRHTDGKEQFDQAMSAVRASPEL 293
Query: 88 VRLGQDARGQERFTTRMMLGIEARMEQAA 2
V LG+D RG++RFT+R M+ E R+ QA+
Sbjct: 294 VALGKDGRGEDRFTSRNMIETEQRLNQAS 322
>ETI63973.1 conjugal transfer protein TrbA [Sphingobium sp. C100]
Length = 1001
Score = 109 bits (273), Expect = 5e-26
Identities = 50/89 (56%), Positives = 69/89 (77%)
Frame = -3
Query: 268 AIAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPEL 89
A+A RNG+RI ADP++AL A+T Q +TFTR+D+A +HRH+DG+ QF M+ V ASPEL
Sbjct: 237 ALAQRNGERIIADPSVALNAITHQQATFTRRDMAMFVHRHTDGKEQFDQAMSAVRASPEL 296
Query: 88 VRLGQDARGQERFTTRMMLGIEARMEQAA 2
V LG+D RG++RFT+R M+ E R+ QA+
Sbjct: 297 VALGKDGRGEDRFTSRNMIETEQRLNQAS 325
>WP_071406650.1 Ti-type conjugative transfer relaxase TraA, partial
[Komagataeibacter intermedius]
Length = 506
Score = 108 bits (271), Expect = 6e-26
Identities = 51/88 (57%), Positives = 69/88 (78%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNG+R+ A+P +AL ALT+Q STFTRQDLAR + RH+ QF+ +M +VEA PELV
Sbjct: 65 IARRNGERLLAEPHVALEALTRQQSTFTRQDLARFVDRHTADAEQFSAVMVRVEACPELV 124
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LG+D G+ERF+TR M+G+E R+E+A+
Sbjct: 125 ALGKDGHGRERFSTRAMIGVEQRLEEAS 152
>WP_039733695.1 Ti-type conjugative transfer relaxase TraA, partial
[Komagataeibacter intermedius]
Length = 532
Score = 108 bits (271), Expect = 7e-26
Identities = 51/88 (57%), Positives = 68/88 (77%)
Frame = -3
Query: 265 IAARNGDRIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEASPELV 86
IA RNG+R+ A+P +AL ALT+Q STFTRQDLAR + RH+ QFT +M +VE PELV
Sbjct: 100 IARRNGERLLAEPHVALEALTRQQSTFTRQDLARFVDRHTADAEQFTAVMVRVEVCPELV 159
Query: 85 RLGQDARGQERFTTRMMLGIEARMEQAA 2
LG+D G+ERF+TR M+G+E R+E+A+
Sbjct: 160 ALGKDGHGRERFSTRAMIGVEQRLEEAS 187