BLASTX nr result

ID: Glycyrrhiza28_contig00039646 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00039646
         (394 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003607325.1 PPR containing plant-like protein [Medicago trunc...    66   4e-10
XP_004514126.1 PREDICTED: pentatricopeptide repeat-containing pr...    65   1e-09
KYP64446.1 hypothetical protein KK1_019043 [Cajanus cajan]             55   4e-06

>XP_003607325.1 PPR containing plant-like protein [Medicago truncatula] AES89522.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 834

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = +2

Query: 161 MRMR-FPNNLSSIPQKKKPRPFSSPLCTKPPLPTATDNFPEKITPTPNFPEKTTISPD-- 331
           +RM+ F +NL+SIPQK   RPF S +       T   +FPEKI  TPNFPEK  ISP+  
Sbjct: 2   LRMKLFSDNLTSIPQKNI-RPFLSQIFF-----TTQQHFPEKIPSTPNFPEKIIISPESQ 55

Query: 332 -PTSKTHVLETLWSHKSNPKSA 394
               K   L TL SHKSNPKSA
Sbjct: 56  PSEKKNRFLVTLLSHKSNPKSA 77


>XP_004514126.1 PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cicer arietinum]
          Length = 850

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 42/82 (51%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = +2

Query: 158 TMRMR---FPNNLSSIPQKKKPRPFSSPLCTKPPLPTATDNFPEKITPTPNFPEKTTISP 328
           TMRMR   F NNLSSIP     RPFS            + NFP+KI  TPNFPEK  I  
Sbjct: 25  TMRMRMRRFSNNLSSIPPNNL-RPFSQ----------LSTNFPDKIISTPNFPEK--IIS 71

Query: 329 DPTSKTHVLETLWSHKSNPKSA 394
              S+  +L+TL +HKSNPKSA
Sbjct: 72  TSNSQNQILDTLLTHKSNPKSA 93


>KYP64446.1 hypothetical protein KK1_019043 [Cajanus cajan]
          Length = 579

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 43/90 (47%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
 Frame = +2

Query: 161 MRMRFPNN--LSSIPQKKKPRPFSSP-----LCTKPPLPT-ATDNFPEKITPTPNFPEKT 316
           M  RFP    L SIP K  P PF        L T PP PT A DNFP KI  + NFPE  
Sbjct: 1   MPTRFPRRSILFSIPTKILP-PFPQRYSNLVLPTDPPPPTPALDNFPGKIASSFNFPE-- 57

Query: 317 TISPDPT----SKTHVLETLWSHKSNPKSA 394
           TI+P+P+    S+  VL+TL  HK +P SA
Sbjct: 58  TIAPEPSWVVPSQDEVLDTLLRHKGDPASA 87


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