BLASTX nr result

ID: Glycyrrhiza28_contig00039502 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00039502
         (241 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU48505.1 hypothetical protein TSUD_291910 [Trifolium subterran...    89   2e-21
GAU12324.1 hypothetical protein TSUD_252750 [Trifolium subterran...    72   1e-13
XP_003608261.1 transmembrane protein, putative [Medicago truncat...    55   3e-08

>GAU48505.1 hypothetical protein TSUD_291910 [Trifolium subterraneum]
          Length = 112

 Score = 89.4 bits (220), Expect = 2e-21
 Identities = 40/53 (75%), Positives = 42/53 (79%)
 Frame = -3

Query: 239 GTFPLRNHFYHFLSDHDRSADCYWLRLDVFIATGIMWFTSLDPSLSFTFEYLN 81
           GTFPLRNHF HFLSDHDRSADCYWLRLDVFIATGIMWFT     +   F + N
Sbjct: 12  GTFPLRNHFDHFLSDHDRSADCYWLRLDVFIATGIMWFTREGRKIIVAFPFPN 64


>GAU12324.1 hypothetical protein TSUD_252750 [Trifolium subterraneum]
          Length = 207

 Score = 72.0 bits (175), Expect = 1e-13
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 209 HFLSDHDRSADCYWLRLDVFIATGIMWFTSL 117
           HFLSDHDRSADCYWLRLDVFIATGIMWFTSL
Sbjct: 100 HFLSDHDRSADCYWLRLDVFIATGIMWFTSL 130


>XP_003608261.1 transmembrane protein, putative [Medicago truncatula] AES90458.1
           transmembrane protein, putative [Medicago truncatula]
          Length = 77

 Score = 55.1 bits (131), Expect = 3e-08
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -1

Query: 199 QTMTGVLIAIGFGWMCSSPLASCG 128
           QTMTGVLIAIGFGWMCSSPLASCG
Sbjct: 31  QTMTGVLIAIGFGWMCSSPLASCG 54


Top