BLASTX nr result
ID: Glycyrrhiza28_contig00039125
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00039125
(307 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KIU54340.1 conjugal transfer protein TraG, partial [Bradyrhizobi... 199 1e-60
WP_044407308.1 MULTISPECIES: conjugal transfer protein TraG [Bra... 197 1e-57
WP_012564827.1 conjugal transfer protein TraG [Oligotropha carbo... 196 4e-57
WP_034462687.1 conjugal transfer protein TraG [Afipia sp. P52-10... 194 1e-56
WP_043854997.1 conjugal transfer protein TraG [Bradyrhizobium el... 194 2e-56
WP_011505126.1 conjugal transfer protein TraG [Nitrobacter hambu... 194 3e-56
WP_006023726.1 MULTISPECIES: hypothetical protein [Afipia] EKS33... 192 1e-55
BAV52653.1 TRAG protein (plasmid) [Mesorhizobium loti] 192 1e-55
OCX32506.1 conjugal transfer protein TraG [Bradyrhizobium sp. UA... 192 1e-55
SCB50240.1 type IV secretion system protein VirD4 [Rhizobium mul... 191 4e-55
WP_061979851.1 MULTISPECIES: conjugal transfer protein TraG [Bra... 188 3e-54
SDR63788.1 type IV secretion system protein VirD4 [Rhizobiales b... 188 3e-54
WP_038357820.1 conjugal transfer protein TraG [Bosea sp. UNC402C... 188 4e-54
WP_040427721.1 conjugal transfer protein TraG [Afipia birgiae] 188 4e-54
WP_066719726.1 MULTISPECIES: conjugal transfer protein TraG [Rhi... 187 6e-54
WP_069694317.1 conjugal transfer protein TraG [Bosea vaviloviae]... 181 9e-52
WP_068181567.1 hypothetical protein [Rhizobiales bacterium CCH3-A5] 132 5e-34
WP_027054596.1 conjugal transfer protein TraG [Mesorhizobium erd... 111 2e-26
WP_056567610.1 conjugal transfer protein TraG [Mesorhizobium sp.... 110 3e-26
EHH05194.1 type IV secretion system protein, partial [Mesorhizob... 108 5e-26
>KIU54340.1 conjugal transfer protein TraG, partial [Bradyrhizobium elkanii]
Length = 419
Score = 199 bits (506), Expect = 1e-60
Identities = 100/100 (100%), Positives = 100/100 (100%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN
Sbjct: 285 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 324
>WP_044407308.1 MULTISPECIES: conjugal transfer protein TraG [Bradyrhizobiaceae]
KIZ46688.1 conjugal transfer protein TraG
[Rhodopseudomonas palustris] KQW18072.1 conjugal
transfer protein TraG [Afipia sp. Root123D2]
Length = 716
Score = 197 bits (502), Expect = 1e-57
Identities = 98/100 (98%), Positives = 100/100 (100%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDISSVLRAIV+TERQHLPTWV+DSFNQYIALEPETRN
Sbjct: 285 TGKDISSVLRAIVRTERQHLPTWVIDSFNQYIALEPETRN 324
>WP_012564827.1 conjugal transfer protein TraG [Oligotropha carboxidovorans]
ACI94803.1 trag protein [Oligotropha carboxidovorans
OM5] AEI04678.1 type IV secretion protein VirD4
(plasmid) [Oligotropha carboxidovorans OM4] AEI08307.1
type IV secretion protein VirD4 (plasmid) [Oligotropha
carboxidovorans OM5]
Length = 718
Score = 196 bits (498), Expect = 4e-57
Identities = 98/100 (98%), Positives = 99/100 (99%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVL+SPLIAGAQHMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLASPLIAGAQHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDISSVLRAIVKTERQHLP WVVDSFNQYIALEPETRN
Sbjct: 285 TGKDISSVLRAIVKTERQHLPAWVVDSFNQYIALEPETRN 324
>WP_034462687.1 conjugal transfer protein TraG [Afipia sp. P52-10] ETR79437.1
conjugal transfer protein TraG [Afipia sp. P52-10]
Length = 713
Score = 194 bits (494), Expect = 1e-56
Identities = 96/100 (96%), Positives = 99/100 (99%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPL+ GAQHMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLVEGAQHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS+VLRAIV+TERQHLPTWVVDSFNQYIALEPETRN
Sbjct: 285 TGKDISTVLRAIVRTERQHLPTWVVDSFNQYIALEPETRN 324
>WP_043854997.1 conjugal transfer protein TraG [Bradyrhizobium elkanii] KIU53307.1
conjugal transfer protein TraG [Bradyrhizobium elkanii]
OJV00524.1 conjugal transfer protein TraG [Nitrobacter
sp. 62-23]
Length = 721
Score = 194 bits (493), Expect = 2e-56
Identities = 97/100 (97%), Positives = 99/100 (99%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMR+VARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRSVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDISSVLRAIV+TER HLPTWVVDSFNQYIALEPETRN
Sbjct: 285 TGKDISSVLRAIVRTERPHLPTWVVDSFNQYIALEPETRN 324
>WP_011505126.1 conjugal transfer protein TraG [Nitrobacter hamburgensis]
ABE65020.1 TRAG protein (plasmid) [Nitrobacter
hamburgensis X14]
Length = 714
Score = 194 bits (492), Expect = 3e-56
Identities = 98/100 (98%), Positives = 98/100 (98%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RD RMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT
Sbjct: 225 RDARMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDISSVLRAIVKTE QHLPTWVVDSFNQYIALEPETRN
Sbjct: 285 TGKDISSVLRAIVKTECQHLPTWVVDSFNQYIALEPETRN 324
>WP_006023726.1 MULTISPECIES: hypothetical protein [Afipia] EKS33006.1 hypothetical
protein HMPREF9695_05021 [Afipia broomeae ATCC 49717]
CEG10519.1 Conjugal transfer protein TraG [Afipia felis]
Length = 712
Score = 192 bits (488), Expect = 1e-55
Identities = 96/100 (96%), Positives = 99/100 (99%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLI GAQHMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIEGAQHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS+VLRAIV+TERQ+LPTWVVDSFNQYIALEPETRN
Sbjct: 285 TGKDISTVLRAIVRTERQNLPTWVVDSFNQYIALEPETRN 324
>BAV52653.1 TRAG protein (plasmid) [Mesorhizobium loti]
Length = 713
Score = 192 bits (488), Expect = 1e-55
Identities = 95/100 (95%), Positives = 99/100 (99%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPL+AGAQHMR+VAR+TT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLVAGAQHMRSVARLTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TG+DISSVLRAIVKTER HLPTWVVDSFNQYIALEPETRN
Sbjct: 285 TGRDISSVLRAIVKTERLHLPTWVVDSFNQYIALEPETRN 324
>OCX32506.1 conjugal transfer protein TraG [Bradyrhizobium sp. UASWS1016]
Length = 713
Score = 192 bits (487), Expect = 1e-55
Identities = 94/100 (94%), Positives = 98/100 (98%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDISS+LR IVKT RQHLPTW++D+FNQYIALEPETRN
Sbjct: 285 TGKDISSLLRTIVKTGRQHLPTWIIDNFNQYIALEPETRN 324
>SCB50240.1 type IV secretion system protein VirD4 [Rhizobium multihospitium]
Length = 718
Score = 191 bits (484), Expect = 4e-55
Identities = 94/100 (94%), Positives = 98/100 (98%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLS+LIGYVL+SPL GA+HMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSSLIGYVLASPLTKGAEHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS+VLRAIVKTERQHLPTWVVDSFNQYIALEPETRN
Sbjct: 285 TGKDISTVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 324
>WP_061979851.1 MULTISPECIES: conjugal transfer protein TraG [Bradyrhizobium]
Length = 726
Score = 188 bits (478), Expect = 3e-54
Identities = 92/100 (92%), Positives = 97/100 (97%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLS+LIGYVL+SPL GA+HMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSSLIGYVLASPLTKGAEHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS+VLRAIVKTER HLPTWV+DSFNQYIALEPETRN
Sbjct: 285 TGKDISTVLRAIVKTERSHLPTWVIDSFNQYIALEPETRN 324
>SDR63788.1 type IV secretion system protein VirD4 [Rhizobiales bacterium
GAS113]
Length = 729
Score = 188 bits (478), Expect = 3e-54
Identities = 92/100 (92%), Positives = 97/100 (97%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGY LSSPL+AGAQH+RTVAR+TT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYALSSPLLAGAQHLRTVARLTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS VLRAIV+TE QHLPTWVVD+FNQYIALEPETRN
Sbjct: 285 TGKDISMVLRAIVRTEHQHLPTWVVDNFNQYIALEPETRN 324
>WP_038357820.1 conjugal transfer protein TraG [Bosea sp. UNC402CLCol]
Length = 715
Score = 188 bits (477), Expect = 4e-54
Identities = 93/100 (93%), Positives = 97/100 (97%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPL A AQHMR+VARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLTASAQHMRSVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS+VLRAIV+TE QHLPTWV+DSFNQYIALEPETRN
Sbjct: 285 TGKDISTVLRAIVQTESQHLPTWVIDSFNQYIALEPETRN 324
>WP_040427721.1 conjugal transfer protein TraG [Afipia birgiae]
Length = 723
Score = 188 bits (477), Expect = 4e-54
Identities = 93/100 (93%), Positives = 97/100 (97%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDERMATDCLVVASFVIPEKADDTWAGAGRLLLS+LIGYVL+SPL A+HMRTVARMTT
Sbjct: 225 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSSLIGYVLASPLTKDAEHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS+VLRAIVKTERQHLPTWVVDSFNQYIALEPETRN
Sbjct: 285 TGKDISTVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 324
>WP_066719726.1 MULTISPECIES: conjugal transfer protein TraG [Rhizobiales]
Length = 720
Score = 187 bits (476), Expect = 6e-54
Identities = 92/100 (92%), Positives = 97/100 (97%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RD+RMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVL+SPL A AQHMRTVARMTT
Sbjct: 225 RDQRMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLASPLTASAQHMRTVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS+VLRAIVKTE +HLPTWV+DSFNQYIALEPETRN
Sbjct: 285 TGKDISTVLRAIVKTESEHLPTWVIDSFNQYIALEPETRN 324
>WP_069694317.1 conjugal transfer protein TraG [Bosea vaviloviae] AOO85134.1
conjugal transfer protein TraG (plasmid) [Bosea
vaviloviae]
Length = 710
Score = 181 bits (460), Expect = 9e-52
Identities = 89/100 (89%), Positives = 96/100 (96%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
RDE MATDCLVVASF++PEKADDTWAGAGRLLLSALIGYVLSSPL A AQHMR+VARMTT
Sbjct: 225 RDELMATDCLVVASFIMPEKADDTWAGAGRLLLSALIGYVLSSPLTAQAQHMRSVARMTT 284
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDISSVLRAIV+TE+ HLP+WV+DSFNQYIALEPETRN
Sbjct: 285 TGKDISSVLRAIVETEQSHLPSWVIDSFNQYIALEPETRN 324
>WP_068181567.1 hypothetical protein [Rhizobiales bacterium CCH3-A5]
Length = 717
Score = 132 bits (333), Expect = 5e-34
Identities = 63/100 (63%), Positives = 79/100 (79%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARMTT 123
R+E M TD LVVA F++P+ + W + RLLL+A+IGYVL+SPL GA+H+R+VARM
Sbjct: 223 RNETMPTDALVVAGFIVPDTPGEVWGKSARLLLAAMIGYVLTSPLCEGARHLRSVARMLV 282
Query: 122 TGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
TGKDIS L++IV TE HLP+WVVD+FNQYIALE ETRN
Sbjct: 283 TGKDISIYLKSIVLTEGDHLPSWVVDAFNQYIALESETRN 322
>WP_027054596.1 conjugal transfer protein TraG [Mesorhizobium erdmanii]
Length = 775
Score = 111 bits (278), Expect = 2e-26
Identities = 57/102 (55%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEK--ADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARM 129
RD RM TDC VV+SF+IPE + + WA AGR LLSA+IGYVL+SP G +H+R VA +
Sbjct: 224 RDARMPTDCAVVSSFIIPEATGSSEIWARAGRQLLSAMIGYVLTSPRYEGQRHLRAVAML 283
Query: 128 TTTGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
+TG D VL I E ++LP+WVV NQ+IALE ETRN
Sbjct: 284 LSTGVDFLRVLTNIRNDEEKYLPSWVVQGLNQFIALEKETRN 325
>WP_056567610.1 conjugal transfer protein TraG [Mesorhizobium sp. Root172]
KRB29650.1 conjugal transfer protein TraG [Mesorhizobium
sp. Root172]
Length = 775
Score = 110 bits (276), Expect = 3e-26
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEK--ADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARM 129
RD RM TDC VV+SF+IPE + + WA AGR LLSA+IGYVL+SP G +H+R VA +
Sbjct: 224 RDARMPTDCAVVSSFIIPEATGSSEIWARAGRQLLSAMIGYVLTSPRYEGQRHLRAVAML 283
Query: 128 TTTGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
+TG D VL I E ++LP+W+V NQ+IALE ETRN
Sbjct: 284 LSTGVDFLRVLTNIRNDEEKYLPSWIVHGLNQFIALEKETRN 325
>EHH05194.1 type IV secretion system protein, partial [Mesorhizobium amorphae
CCNWGS0123]
Length = 365
Score = 108 bits (269), Expect = 5e-26
Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Frame = -3
Query: 302 RDERMATDCLVVASFVIPEK--ADDTWAGAGRLLLSALIGYVLSSPLIAGAQHMRTVARM 129
RD RM TDC VV+SF+IPE + + WA AGR LLSA+IGYVL+S G +H+R VA +
Sbjct: 220 RDARMPTDCAVVSSFIIPEATGSSEIWARAGRQLLSAMIGYVLTSQRYEGQRHLRAVAML 279
Query: 128 TTTGKDISSVLRAIVKTERQHLPTWVVDSFNQYIALEPETRN 3
+TG D VL I E ++LP+WVV NQ+IALE ETRN
Sbjct: 280 LSTGVDFLRVLTNIRNDEEKYLPSWVVHGLNQFIALEKETRN 321