BLASTX nr result
ID: Glycyrrhiza28_contig00039079
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00039079
(278 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERF82170.1 type IV secretion system protein VirD4 [Bradyrhizobiu... 180 1e-51
OCX25987.1 type IV secretion system protein VirD4 (plasmid) [Bra... 169 9e-48
WP_027582196.1 type IV secretory pathway protein VirD4 [Bradyrhi... 166 1e-46
WP_024582768.1 type IV secretory pathway protein VirD4 [Bradyrhi... 165 5e-46
SFJ58675.1 type IV secretion system protein VirD4 [Bradyrhizobiu... 153 2e-45
WP_028133091.1 type IV secretory pathway protein VirD4 [Bradyrhi... 163 2e-45
WP_074448533.1 type IV secretion system protein VirD4 [Bradyrhiz... 162 7e-45
WP_036029491.1 type IV secretory pathway protein VirD4 [Bradyrhi... 162 7e-45
WP_025038381.1 type IV secretory pathway protein VirD4 [Bradyrhi... 159 5e-44
WP_009859418.1 type IV secretory pathway protein VirD4 [Bradyrhi... 159 5e-44
WP_057196753.1 MULTISPECIES: type IV secretion system protein Vi... 159 7e-44
WP_011931068.1 type IV secretory pathway protein VirD4 [Bradyrhi... 159 9e-44
WP_028343063.1 type IV secretory pathway protein VirD4 [Bradyrhi... 158 1e-43
WP_016846656.1 type IV secretory pathway protein VirD4 [Bradyrhi... 157 2e-43
WP_051052588.1 type IV secretion system protein VirD4 [Bradyrhiz... 157 3e-43
WP_038975163.1 type IV secretory pathway protein VirD4 [Bradyrhi... 157 3e-43
WP_036045845.1 type IV secretory pathway protein VirD4 [Bradyrhi... 157 3e-43
WP_038381254.1 type IV secretory pathway protein VirD4 [Bradyrhi... 156 6e-43
CUT16490.1 Coupling protein VirD4 ATPase required for TDNA trans... 156 6e-43
WP_028143672.1 type IV secretory pathway protein VirD4 [Bradyrhi... 155 2e-42
>ERF82170.1 type IV secretion system protein VirD4 [Bradyrhizobium sp. DFCI-1]
Length = 648
Score = 180 bits (456), Expect = 1e-51
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PELPRSRSNALLDAEIKELRSEVAEL AVFRSRPMTDEEVADPSTIPANASFDFGDVDVD
Sbjct: 548 PELPRSRSNALLDAEIKELRSEVAELRAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ
Sbjct: 608 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 639
>OCX25987.1 type IV secretion system protein VirD4 (plasmid) [Bradyrhizobium
sp. UASWS1016]
Length = 648
Score = 169 bits (429), Expect = 9e-48
Identities = 85/92 (92%), Positives = 88/92 (95%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PE+PR RSNALLDAEIKELRSEVAEL AVFR+RPMTDEEVADPSTIPANASFDFGDVDVD
Sbjct: 548 PEMPRGRSNALLDAEIKELRSEVAELRAVFRTRPMTDEEVADPSTIPANASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAWTLNYIDAQA+P ARR SRKQ
Sbjct: 608 LEGLSEDDMKAWTLNYIDAQAIPPARRGSRKQ 639
>WP_027582196.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp. Ai1a-2]
Length = 648
Score = 166 bits (421), Expect = 1e-46
Identities = 84/92 (91%), Positives = 87/92 (94%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P+LPR RS ALLDAEIKELRSEVAEL AVFRSRPMTDEEVADPSTIPANASFDFGDV+VD
Sbjct: 548 PKLPRDRSTALLDAEIKELRSEVAELRAVFRSRPMTDEEVADPSTIPANASFDFGDVEVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSED MKAWTLNYIDAQA+P ARRPSRKQ
Sbjct: 608 LEGLSEDAMKAWTLNYIDAQAIPPARRPSRKQ 639
>WP_024582768.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp.
OHSU_III]
Length = 648
Score = 165 bits (417), Expect = 5e-46
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PE+P+ RSNALLDAE+KELRSE+AEL AVFR+RP+TDEEVADPSTIPANASFDFGDVDVD
Sbjct: 548 PEMPKGRSNALLDAELKELRSEIAELRAVFRARPLTDEEVADPSTIPANASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAWTLNYIDAQA+P ARR RKQ
Sbjct: 608 LEGLSEDDMKAWTLNYIDAQAIPPARRSGRKQ 639
>SFJ58675.1 type IV secretion system protein VirD4 [Bradyrhizobium sp. Gha]
Length = 204
Score = 153 bits (387), Expect = 2e-45
Identities = 74/92 (80%), Positives = 82/92 (89%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P++P RSNALLDAEIKELRSE+AEL AVFR+RPMTDEEVADPSTIPA ASFDFGDVDVD
Sbjct: 104 PKMPNVRSNALLDAEIKELRSEIAELRAVFRARPMTDEEVADPSTIPAGASFDFGDVDVD 163
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDD+KAW +NYIDAQ +P RR R+Q
Sbjct: 164 LEGLSEDDLKAWVMNYIDAQVIPPTRRTGRRQ 195
>WP_028133091.1 type IV secretory pathway protein VirD4 [Bradyrhizobium japonicum]
Length = 648
Score = 163 bits (412), Expect = 2e-45
Identities = 79/92 (85%), Positives = 87/92 (94%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P++P++RSNALLDAEIKELRSE+AEL AVFR+RPMTDEEVADPSTIPA ASFDFGDVDVD
Sbjct: 548 PKMPKARSNALLDAEIKELRSEIAELRAVFRARPMTDEEVADPSTIPAGASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAW LNYIDAQA+P ARRP RK+
Sbjct: 608 LEGLSEDDMKAWVLNYIDAQAIPPARRPGRKR 639
>WP_074448533.1 type IV secretion system protein VirD4 [Bradyrhizobium
yuanmingense] SCB52539.1 type IV secretion system
protein VirD4 [Bradyrhizobium yuanmingense]
Length = 648
Score = 162 bits (409), Expect = 7e-45
Identities = 79/92 (85%), Positives = 86/92 (93%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PELP+ RSNALLDAEIKELRSE+AEL AVFRSRPMTD+EVADPST+PA ASFDFGDV+VD
Sbjct: 548 PELPKGRSNALLDAEIKELRSEIAELRAVFRSRPMTDDEVADPSTMPAGASFDFGDVNVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAW LNYIDAQA+P ARRP RK+
Sbjct: 608 LEGLSEDDMKAWVLNYIDAQAIPPARRPGRKR 639
>WP_036029491.1 type IV secretory pathway protein VirD4 [Bradyrhizobium
yuanmingense]
Length = 648
Score = 162 bits (409), Expect = 7e-45
Identities = 79/92 (85%), Positives = 86/92 (93%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PELP+ RSNALLDAEIKELRSE+AEL AVFRSRPMTD+EVADPST+PA ASFDFGDV+VD
Sbjct: 548 PELPKGRSNALLDAEIKELRSEIAELRAVFRSRPMTDDEVADPSTMPAGASFDFGDVNVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAW LNYIDAQA+P ARRP RK+
Sbjct: 608 LEGLSEDDMKAWVLNYIDAQAIPPARRPGRKR 639
>WP_025038381.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp. DOA9]
GAJ37479.1 protein virD4 [Bradyrhizobium sp. DOA9]
Length = 648
Score = 159 bits (403), Expect = 5e-44
Identities = 80/92 (86%), Positives = 85/92 (92%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P+LP RS A+LDAEIKELRSEVAEL AVFRSRPMTDEEVADPSTIPANASFDFGDVDVD
Sbjct: 548 PKLPTGRSTAVLDAEIKELRSEVAELRAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSE+D+KAW LNYIDAQA+P ARR SRKQ
Sbjct: 608 LEGLSEEDLKAWVLNYIDAQAVPPARRSSRKQ 639
>WP_009859418.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp.
WSM1253] EIG63808.1 type IV secretory pathway, VirD4
component [Bradyrhizobium sp. WSM1253]
Length = 648
Score = 159 bits (403), Expect = 5e-44
Identities = 79/92 (85%), Positives = 85/92 (92%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PE+P+ RSNALLDAE+KELRSEVAEL AVFRSRPMTDEEVADPSTIPA ASFDFGDVDVD
Sbjct: 548 PEMPKGRSNALLDAELKELRSEVAELRAVFRSRPMTDEEVADPSTIPAGASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSE+ +KAWTLNYIDAQA+P ARR RKQ
Sbjct: 608 LEGLSEEALKAWTLNYIDAQAIPPARRSGRKQ 639
>WP_057196753.1 MULTISPECIES: type IV secretion system protein VirD4
[Bradyrhizobium] KQT20779.1 type IV secretion system
protein VirD4 [Bradyrhizobium sp. Leaf396]
Length = 648
Score = 159 bits (402), Expect = 7e-44
Identities = 78/92 (84%), Positives = 83/92 (90%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PELP+ RSNALLDAE+KELRSE+AEL AVFR RPMTDEEVADPSTIPA ASFDFGDVDVD
Sbjct: 548 PELPKGRSNALLDAELKELRSEIAELRAVFRKRPMTDEEVADPSTIPAEASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDD+KAWTL YIDAQ +P ARR RKQ
Sbjct: 608 LEGLSEDDLKAWTLKYIDAQVIPPARRTGRKQ 639
>WP_011931068.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp. BTAi1]
ABQ39884.1 putative type IV secretory pathway protein
VirD4 (plasmid) [Bradyrhizobium sp. BTAi1]
Length = 648
Score = 159 bits (401), Expect = 9e-44
Identities = 79/92 (85%), Positives = 83/92 (90%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PE+P RSNALLDAEIKELRS VAEL A FRSRPMTDEEVADPSTIPA+ASFDFGDVDVD
Sbjct: 548 PEMPNGRSNALLDAEIKELRSAVAELRAAFRSRPMTDEEVADPSTIPADASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAW LNYIDAQA+P +RR RKQ
Sbjct: 608 LEGLSEDDMKAWVLNYIDAQAIPPSRRTGRKQ 639
>WP_028343063.1 type IV secretory pathway protein VirD4 [Bradyrhizobium elkanii]
Length = 648
Score = 158 bits (400), Expect = 1e-43
Identities = 77/91 (84%), Positives = 84/91 (92%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P++P+ RSNALLDAEIKELRSE+AEL AVFR+RPMTDEEVADPSTIPA ASFDFGDVDVD
Sbjct: 548 PQMPKERSNALLDAEIKELRSEIAELRAVFRARPMTDEEVADPSTIPAGASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRK 274
L+GLSE DMKAW LNYIDAQA+P ARRP RK
Sbjct: 608 LDGLSEADMKAWVLNYIDAQAIPPARRPGRK 638
>WP_016846656.1 type IV secretory pathway protein VirD4 [Bradyrhizobium elkanii]
OIM94467.1 type IV secretion system protein VirD4
[Bradyrhizobium elkanii]
Length = 647
Score = 157 bits (398), Expect = 2e-43
Identities = 77/92 (83%), Positives = 85/92 (92%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P++ + RSNALL+AEIKELRSE+AEL AVFR+RPMTDEEVADPSTIPA ASFDFGDVDVD
Sbjct: 548 PQMHKERSNALLNAEIKELRSEIAELRAVFRARPMTDEEVADPSTIPAGASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAW LNYIDAQA+P ARRP RK+
Sbjct: 608 LEGLSEDDMKAWVLNYIDAQAIPPARRPGRKR 639
>WP_051052588.1 type IV secretion system protein VirD4 [Bradyrhizobium
liaoningense]
Length = 609
Score = 157 bits (396), Expect = 3e-43
Identities = 76/92 (82%), Positives = 85/92 (92%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PELP+ RSNALLDAE+K+LRSE+AEL AVFR+RPMTD+EVADPSTIPANASFDFGDVD+D
Sbjct: 512 PELPKGRSNALLDAELKKLRSEIAELRAVFRARPMTDDEVADPSTIPANASFDFGDVDID 571
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSED MKAWTLNYIDAQA+P ARR K+
Sbjct: 572 LEGLSEDGMKAWTLNYIDAQAIPPARRSGPKR 603
>WP_038975163.1 type IV secretory pathway protein VirD4 [Bradyrhizobium sp. CCBAU
15615]
Length = 648
Score = 157 bits (397), Expect = 3e-43
Identities = 76/92 (82%), Positives = 85/92 (92%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PELP+ RSNALLDAE+KELRSE+AEL AVFR+RPMTD++VADPSTIP NASFDFGDV+VD
Sbjct: 548 PELPKGRSNALLDAELKELRSEIAELRAVFRARPMTDDDVADPSTIPDNASFDFGDVNVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAWTLNYIDAQ +P ARR RK+
Sbjct: 608 LEGLSEDDMKAWTLNYIDAQTIPPARRSGRKK 639
>WP_036045845.1 type IV secretory pathway protein VirD4 [Bradyrhizobium
yuanmingense]
Length = 648
Score = 157 bits (397), Expect = 3e-43
Identities = 75/92 (81%), Positives = 85/92 (92%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P+LP+ RSNALLDAEIKELR+EVAEL AVFR+RPMTDEEVADPSTIP+NASFDFGDVD+D
Sbjct: 548 PQLPKERSNALLDAEIKELRAEVAELRAVFRARPMTDEEVADPSTIPSNASFDFGDVDID 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEG+SEDD+KAWTLNYIDAQ +P +R RKQ
Sbjct: 608 LEGVSEDDLKAWTLNYIDAQVIPPTQRTGRKQ 639
>WP_038381254.1 type IV secretory pathway protein VirD4 [Bradyrhizobium elkanii]
Length = 645
Score = 156 bits (395), Expect = 6e-43
Identities = 75/92 (81%), Positives = 85/92 (92%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P++P+ RSNALLDAEIKELRSE+AEL VFR+RPMTD+EVADPSTIPANASFDFG+VD+D
Sbjct: 548 PQMPKGRSNALLDAEIKELRSEIAELRTVFRARPMTDDEVADPSTIPANASFDFGNVDID 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSEDDMKAWTLNYIDAQA+P ARR K+
Sbjct: 608 LEGLSEDDMKAWTLNYIDAQAIPPARRSGPKR 639
>CUT16490.1 Coupling protein VirD4 ATPase required for TDNA transfer CDS
(plasmid) [Bradyrhizobium sp.]
Length = 648
Score = 156 bits (395), Expect = 6e-43
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
P +P+ RSNALLDAEIKELRSE+AEL AVFR+RPMTDEEVADPS IPA ASFDFGDVDVD
Sbjct: 548 PRMPKGRSNALLDAEIKELRSEIAELRAVFRTRPMTDEEVADPSAIPAGASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSE+++KAWTLNYIDAQA+P ARR RKQ
Sbjct: 608 LEGLSEEELKAWTLNYIDAQAIPPARRSGRKQ 639
>WP_028143672.1 type IV secretory pathway protein VirD4 [Bradyrhizobium japonicum]
Length = 648
Score = 155 bits (392), Expect = 2e-42
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +2
Query: 2 PELPRSRSNALLDAEIKELRSEVAELPAVFRSRPMTDEEVADPSTIPANASFDFGDVDVD 181
PE+P+ RSNALLDAE+KELRSEVAEL AVFRSRPMTDEEVADPS IP ASFDFGDVDVD
Sbjct: 548 PEMPKGRSNALLDAELKELRSEVAELRAVFRSRPMTDEEVADPSAIPDGASFDFGDVDVD 607
Query: 182 LEGLSEDDMKAWTLNYIDAQALPLARRPSRKQ 277
LEGLSE+++KAWTLNYIDAQA+P A+R RKQ
Sbjct: 608 LEGLSEEELKAWTLNYIDAQAIPPAQRSGRKQ 639