BLASTX nr result
ID: Glycyrrhiza28_contig00039022
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00039022
(294 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_015934001.1 LysR family transcriptional regulator [Methylobac... 134 2e-36
SFM83137.1 transcriptional regulator, LysR family [Methylobacter... 133 5e-36
WP_063840129.1 hypothetical protein [Bradyrhizobium sp. LTSP885] 90 2e-19
WP_028054692.1 LysR family transcriptional regulator [Sinorhizob... 89 2e-19
WP_011970704.1 LysR family transcriptional regulator [Sinorhizob... 89 2e-19
WP_018011292.1 LysR family transcriptional regulator [Sinorhizob... 86 3e-18
WP_061538521.1 MULTISPECIES: LysR family transcriptional regulat... 83 6e-17
KSV77410.1 LysR family transcriptional regulator [Sinorhizobium ... 81 3e-16
WP_020653100.1 hypothetical protein [Massilia niastensis] 80 4e-16
WP_069915746.1 hypothetical protein [Burkholderia sp. RPE64] 80 5e-16
BAO94143.1 transcriptional regulator LysR family (plasmid) [Burk... 80 5e-16
WP_060607693.1 hypothetical protein [Aureimonas altamirensis] BA... 78 3e-15
WP_008054682.1 transcriptional regulator [Pseudomonas sp. GM78] ... 78 4e-15
WP_074983256.1 hypothetical protein [Paraburkholderia tropica] S... 77 8e-15
WP_065063857.1 hypothetical protein [Paraburkholderia tropica] O... 77 8e-15
WP_051373616.1 hypothetical protein [gamma proteobacterium L18] 75 3e-14
WP_051961606.1 hypothetical protein [Rhizobium sp. YR519] 75 4e-14
WP_055773490.1 LysR family transcriptional regulator [Serratia s... 75 6e-14
WP_056146590.1 LysR family transcriptional regulator [Duganella ... 74 1e-13
WP_045049695.1 LysR family transcriptional regulator [Rouxiella ... 74 1e-13
>WP_015934001.1 LysR family transcriptional regulator [Methylobacterium nodulans]
ACL62451.1 transcriptional regulator, LysR family
(plasmid) [Methylobacterium nodulans ORS 2060]
Length = 318
Score = 134 bits (337), Expect = 2e-36
Identities = 64/95 (67%), Positives = 76/95 (80%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V IG GATM EYLLPQ+CRA+IA AP + +E+QIGMSGV+ ALR+ LDL IGP+L SD
Sbjct: 93 VRIGTGATMAEYLLPQVCRALIAAAPAVTVELQIGMSGVLRTALRDNQLDLIIGPVLASD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDLV 6
EF+H FG DDVVVVAA+ HPLCG+ L+IEDLV
Sbjct: 153 HDEFAHVTFGTDDVVVVAARGHPLCGRPLSIEDLV 187
>SFM83137.1 transcriptional regulator, LysR family [Methylobacterium
pseudosasicola]
Length = 321
Score = 133 bits (334), Expect = 5e-36
Identities = 64/94 (68%), Positives = 75/94 (79%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V IG GATM EYLLP ICR +IA APG+ +++QIGMSGV+ ALRE LDL IGP+LP D
Sbjct: 93 VRIGTGATMAEYLLPHICRQLIAAAPGVTVDLQIGMSGVLRMALRESRLDLLIGPVLPGD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
EFSHEA G D+VVVVAAK HPLCG++L IE+L
Sbjct: 153 ADEFSHEALGADEVVVVAAKGHPLCGRTLRIEEL 186
>WP_063840129.1 hypothetical protein [Bradyrhizobium sp. LTSP885]
Length = 324
Score = 90.1 bits (222), Expect = 2e-19
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V IG GAT EY LP++CR +++ +PG+ +E+ IGM+ V+ ALR +DL +GPI D
Sbjct: 93 VRIGTGATTAEYFLPEVCRTLLSKSPGVKVELSIGMNDVLRTALRANRIDLVVGPITEVD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPL 39
E EF+ G D+VVV A+++HPL
Sbjct: 153 ELEFTCHDLGRDEVVVAASREHPL 176
>WP_028054692.1 LysR family transcriptional regulator [Sinorhizobium meliloti]
Length = 307
Score = 89.4 bits (220), Expect = 2e-19
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V +G GAT EYLLP +C I+ +APG+ E+ IGM+ V+ AL + +D+ +GP+ D
Sbjct: 93 VRVGSGATTAEYLLPLVCSRILREAPGIKFEISIGMNDVLRTALNDGKVDIVVGPVTKGD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
E ++ G D VVV AA+ HPL K I DL
Sbjct: 153 ESNYTVHRLGEDSVVVAAARGHPLTRKKATIADL 186
>WP_011970704.1 LysR family transcriptional regulator [Sinorhizobium medicae]
YP_001314529.1 LysR family transcriptional regulator
(plasmid) [Sinorhizobium medicae WSM419] ABR64596.1
transcriptional regulator, LysR family (plasmid)
[Sinorhizobium medicae WSM419]
Length = 307
Score = 89.4 bits (220), Expect = 2e-19
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V +G GAT EYLLP +C I+ +APG+ E+ IGM+ V+ AL + +D+ +GP+ D
Sbjct: 93 VRVGSGATTAEYLLPLVCSRILREAPGIKFEISIGMNDVLRTALNDGKVDIVVGPVTKGD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
E ++ G D VVV AA+ HPL K I DL
Sbjct: 153 ESNYTVHRLGEDSVVVAAARGHPLTRKKATIADL 186
>WP_018011292.1 LysR family transcriptional regulator [Sinorhizobium medicae]
Length = 307
Score = 86.3 bits (212), Expect = 3e-18
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V +G GAT YLLP +C I+ +APG+ +E+ IGM+ V+ AL +D+ +GP+ D
Sbjct: 93 VRVGSGATTAGYLLPLVCSRILREAPGIKVEISIGMNDVLRTALNYGKVDIVVGPVTKGD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
E ++ G D VVV AA+ HPL K I DL
Sbjct: 153 ESNYTVHRLGEDSVVVAAARGHPLTRKKATIADL 186
>WP_061538521.1 MULTISPECIES: LysR family transcriptional regulator [Collimonas]
AMO93162.1 bacterial regulatory helix-turn-helix, lysR
family protein [Collimonas fungivorans] AMP02823.1
bacterial regulatory helix-turn-helix, lysR family
protein [Collimonas pratensis]
Length = 299
Score = 82.8 bits (203), Expect = 6e-17
Identities = 38/95 (40%), Positives = 64/95 (67%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
+ +GC T+ E+LLPQ+C+ ++A+AP + I++ + M+ ++ AL LDLA+GPI+ SD
Sbjct: 93 IRLGCVPTLAEHLLPQVCQELLAEAPDVTIQLMVSMNDALLEALNGGDLDLAVGPIVQSD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDLV 6
+ E D+VVV+AAKDHP+ + ++DL+
Sbjct: 153 -ADVESEQIVEDEVVVLAAKDHPIFKRRYTLKDLL 186
>KSV77410.1 LysR family transcriptional regulator [Sinorhizobium sp. GL2]
Length = 305
Score = 80.9 bits (198), Expect = 3e-16
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
+ +G GAT EYLLPQ+C ++ + PG+ ++ IGM+ V+ A L + +D+ +GP+ D
Sbjct: 93 IRVGSGATTAEYLLPQVCSRLLTETPGIRFDISIGMNDVLRAMLNDGKVDVIVGPVAKGD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
++ ++ G D VVV AA+ H L + I DL
Sbjct: 153 DETYTVHRLGDDSVVVAAARGHALTHGPVTIADL 186
>WP_020653100.1 hypothetical protein [Massilia niastensis]
Length = 299
Score = 80.5 bits (197), Expect = 4e-16
Identities = 35/93 (37%), Positives = 62/93 (66%)
Frame = -2
Query: 284 IGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSDEQ 105
+GC T+ E+L+P + + ++A+AP + +E+ + M+ ++ ALR+ LDL +GP++ +DE
Sbjct: 95 VGCVPTVAEHLMPVVFQELLAEAPEVNVELMVAMNDAILGALRDGQLDLVVGPVVDADE- 153
Query: 104 EFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDLV 6
E E F D+ VV+ +KDHP+ S +EDL+
Sbjct: 154 ELESEQFAEDEAVVMTSKDHPIFRGSYTLEDLL 186
>WP_069915746.1 hypothetical protein [Burkholderia sp. RPE64]
Length = 301
Score = 80.5 bits (197), Expect = 5e-16
Identities = 36/94 (38%), Positives = 63/94 (67%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V +G AT+ E+++P +CRA++ +AP +A+E+QIGM+ V+ +LR+R LD+ +GP+ D
Sbjct: 93 VRVGAAATIAEFVMPAVCRAMLEEAPEVAVELQIGMNDVLHESLRKRLLDVVVGPLGTRD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
+ + D+VVV A+ HPL G +++D+
Sbjct: 153 D-ALTEIPIATDEVVVAASASHPLAGAHASLQDM 185
>BAO94143.1 transcriptional regulator LysR family (plasmid) [Burkholderia sp.
RPE64]
Length = 305
Score = 80.5 bits (197), Expect = 5e-16
Identities = 36/94 (38%), Positives = 63/94 (67%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V +G AT+ E+++P +CRA++ +AP +A+E+QIGM+ V+ +LR+R LD+ +GP+ D
Sbjct: 97 VRVGAAATIAEFVMPAVCRAMLEEAPEVAVELQIGMNDVLHESLRKRLLDVVVGPLGTRD 156
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
+ + D+VVV A+ HPL G +++D+
Sbjct: 157 D-ALTEIPIATDEVVVAASASHPLAGAHASLQDM 189
>WP_060607693.1 hypothetical protein [Aureimonas altamirensis] BAT26226.1
transcriptional regulator, LysR family [Aureimonas
altamirensis] SHJ41411.1 DNA-binding transcriptional
regulator, LysR family [Aureimonas altamirensis DSM
21988]
Length = 298
Score = 78.2 bits (191), Expect = 3e-15
Identities = 39/95 (41%), Positives = 59/95 (62%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V +G ATM E LLP++ I+ +APG+ +++ GM+ V+ ALRE LD+ + P P
Sbjct: 93 VRLGAAATMTETLLPKVIELIVREAPGITLDLMTGMNDVLRDALREDRLDMLVSPTAPGG 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDLV 6
+ EF +E DDVVVVA HPL G+ +E+++
Sbjct: 153 D-EFEYEPLISDDVVVVARAGHPLAGREGRMEEML 186
>WP_008054682.1 transcriptional regulator [Pseudomonas sp. GM78] EJN35171.1
transcriptional regulator [Pseudomonas sp. GM78]
Length = 297
Score = 77.8 bits (190), Expect = 4e-15
Identities = 39/94 (41%), Positives = 61/94 (64%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
+ +G AT E++LP+ CR + AP + +E+QIGM+ V+ +LR+ LDL +GP+ D
Sbjct: 97 IRVGAAATTAEFVLPKACRLLQEQAPAVLLEIQIGMNDVLHDSLRKGALDLVVGPLGTRD 156
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
E E S A D+VVVVA+ +HPL G+ + ++ L
Sbjct: 157 E-ELSELAILNDEVVVVASANHPLAGRHVPMQAL 189
>WP_074983256.1 hypothetical protein [Paraburkholderia tropica] SEJ60474.1
transcriptional regulator, LysR family [Paraburkholderia
tropica]
Length = 326
Score = 77.4 bits (189), Expect = 8e-15
Identities = 39/96 (40%), Positives = 58/96 (60%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V +G AT+ E+++P CR + +AP + +E+QIGM+ V+ ALR+R LD+ IGP+ D
Sbjct: 97 VKVGAAATIAEFIMPTACRVLHEEAPAVVVELQIGMNDVLQDALRKRQLDVVIGPLGRHD 156
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDLVA 3
+ DDVVV A+ HPL GK +E + A
Sbjct: 157 DALVQIPILA-DDVVVAASATHPLAGKRATLEAMSA 191
>WP_065063857.1 hypothetical protein [Paraburkholderia tropica] OBR48089.1
hypothetical protein A6456_06435 [Paraburkholderia
tropica]
Length = 326
Score = 77.4 bits (189), Expect = 8e-15
Identities = 39/96 (40%), Positives = 58/96 (60%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V +G AT+ E+++P CR + +AP + +E+QIGM+ V+ ALR+R LD+ IGP+ D
Sbjct: 97 VKVGAAATIAEFIMPTACRVLHEEAPAVVVELQIGMNDVLQDALRKRQLDVVIGPLGRHD 156
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDLVA 3
+ DDVVV A+ HPL GK +E + A
Sbjct: 157 DALVQIPILA-DDVVVAASATHPLAGKRATLEAMSA 191
>WP_051373616.1 hypothetical protein [gamma proteobacterium L18]
Length = 302
Score = 75.5 bits (184), Expect = 3e-14
Identities = 36/94 (38%), Positives = 58/94 (61%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
+ +G AT EYL+P CR + AP + +++QIGM+ V+ +LR+ LD+ +GP+ D
Sbjct: 97 IRVGAAATTAEYLMPGACRLLQEQAPAVVLDLQIGMNDVLHDSLRKGLLDIVVGPLGTRD 156
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDL 9
+ + +A D+VVV A+ DHPL G+ +E L
Sbjct: 157 D-DLIEQAIDGDEVVVAASADHPLAGRDAPLEAL 189
>WP_051961606.1 hypothetical protein [Rhizobium sp. YR519]
Length = 333
Score = 75.5 bits (184), Expect = 4e-14
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
V IG AT EY+LP I +I AP +A+E+ +GM+ V++ L E+ LDL GP+ +
Sbjct: 122 VKIGSAATAAEYMLPPITAELIRRAPAVALELTVGMNDVLIRGLVEKNLDLVFGPLTRTT 181
Query: 110 EQEFSHEAFGM--DDVVVVAAKDHPLCGKSLAIEDL 9
S EAF + DDVV VA+ DHP+ + + I+ L
Sbjct: 182 MDSDSFEAFPLVTDDVVAVASHDHPIFDQEVTIDKL 217
>WP_055773490.1 LysR family transcriptional regulator [Serratia sp. Leaf50]
KQN50533.1 LysR family transcriptional regulator
[Serratia sp. Leaf50]
Length = 296
Score = 74.7 bits (182), Expect = 6e-14
Identities = 34/86 (39%), Positives = 56/86 (65%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
+ +G AT E++LPQ+ + ++A+AP + ++V++GM+ ++ LRE+ LD+ +G LP
Sbjct: 93 IRLGAAATAAEFMLPQLAKRLLAEAPSVRLDVKVGMNDLLQNTLREKQLDIILG-FLPDT 151
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCG 33
EF D VV+VA+KDHPL G
Sbjct: 152 SSEFISRPLLDDPVVLVASKDHPLAG 177
>WP_056146590.1 LysR family transcriptional regulator [Duganella sp. Leaf61]
KQN69152.1 LysR family transcriptional regulator
[Duganella sp. Leaf61]
Length = 313
Score = 74.3 bits (181), Expect = 1e-13
Identities = 39/96 (40%), Positives = 57/96 (59%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
+ +GC T+ E+LLPQI ++ AP + I + + M+ ++A LR DL +GP+L SD
Sbjct: 93 IRLGCVPTLAEHLLPQILHDMLEQAPEVTIRLGVAMNDALLAGLRGGEFDLVVGPMLESD 152
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCGKSLAIEDLVA 3
QEF E D +VVVA+K HPL + DL+A
Sbjct: 153 -QEFVSEQIVEDQMVVVASKQHPLFAGPYTMADLLA 187
>WP_045049695.1 LysR family transcriptional regulator [Rouxiella chamberiensis]
Length = 296
Score = 73.9 bits (180), Expect = 1e-13
Identities = 33/86 (38%), Positives = 56/86 (65%)
Frame = -2
Query: 290 VSIGCGATMGEYLLPQICRAIIADAPGLAIEVQIGMSGVVMAALRERTLDLAIGPILPSD 111
+ +G AT E++LPQ+ + ++ +AP + ++V++GM+ ++ + LRE+ LD+ +G LP
Sbjct: 93 IRLGAAATAAEFMLPQLAKRLLEEAPSVRLDVKVGMNDLLQSTLREKQLDIILG-FLPEK 151
Query: 110 EQEFSHEAFGMDDVVVVAAKDHPLCG 33
EF D VV+VA+KDHPL G
Sbjct: 152 SNEFISRPLLDDPVVLVASKDHPLAG 177