BLASTX nr result
ID: Glycyrrhiza28_contig00038948
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00038948
(245 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU50408.1 hypothetical protein TSUD_244550 [Trifolium subterran... 61 9e-16
XP_003600272.2 replication factor-A carboxy-terminal domain prot... 50 2e-12
XP_003605674.2 replication factor-A carboxy-terminal domain prot... 50 2e-12
XP_003605675.1 replication factor-A carboxy-terminal domain prot... 50 2e-12
XP_003593181.2 replication factor-A carboxy-terminal domain prot... 54 7e-12
XP_013446466.1 replication factor-A carboxy-terminal domain prot... 54 7e-12
XP_003600269.1 DUF223 domain protein [Medicago truncatula] AES70... 49 2e-11
XP_007149762.1 hypothetical protein PHAVU_005G096800g [Phaseolus... 55 3e-11
XP_013463919.1 animal RPA1 domain protein [Medicago truncatula] ... 53 3e-11
XP_013455287.1 replication factor-A carboxy-terminal domain prot... 50 6e-11
XP_003629969.2 DUF223 domain protein [Medicago truncatula] AET04... 50 2e-10
GAU20673.1 hypothetical protein TSUD_230870 [Trifolium subterran... 54 4e-10
GAU42710.1 hypothetical protein TSUD_382460 [Trifolium subterran... 55 8e-10
XP_007146146.1 hypothetical protein PHAVU_006G016100g [Phaseolus... 54 1e-09
XP_013445470.1 DUF223 domain protein [Medicago truncatula] KEH19... 46 2e-09
GAU46627.1 hypothetical protein TSUD_284750 [Trifolium subterran... 52 6e-09
XP_003595821.1 DUF223 domain protein [Medicago truncatula] ABN08... 47 6e-09
GAU47630.1 hypothetical protein TSUD_137600 [Trifolium subterran... 44 1e-08
XP_013452088.1 replication factor-A carboxy-terminal domain prot... 45 3e-08
GAU28620.1 hypothetical protein TSUD_55640 [Trifolium subterraneum] 43 6e-08
>GAU50408.1 hypothetical protein TSUD_244550 [Trifolium subterraneum]
Length = 340
Score = 60.8 bits (146), Expect(2) = 9e-16
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -1
Query: 116 FMCTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
F CTLFGSYVD LNS+++SG+ ENVVVVIL AK+ +FQ
Sbjct: 175 FKCTLFGSYVDMLNSYLASGETENVVVVILLAKVKIFQ 212
Score = 49.7 bits (117), Expect(2) = 9e-16
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGY 119
+VMGMLTAVG E+T+ RN +K+ V+ELDNDGY
Sbjct: 140 DVMGMLTAVGVEKTYHRNGTQSKMVVVELDNDGY 173
>XP_003600272.2 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] AES70523.2 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 719
Score = 50.4 bits (119), Expect(2) = 2e-12
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFG+YVD+LN+F+++G+ NVVV I AK+ +FQ
Sbjct: 336 CTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQ 371
Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+V+GMLT VG ER +ERN + TKLNVI ++ DGY L
Sbjct: 299 DVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKL 334
Score = 48.5 bits (114), Expect(2) = 5e-11
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+V+GMLT VG ER +ERN + TKLNVI ++ DGY L
Sbjct: 140 DVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKL 175
Score = 45.8 bits (107), Expect(2) = 5e-11
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKI 15
CTLFG+YVD+LN+F+++G+ NVVV I AK+
Sbjct: 177 CTLFGTYVDKLNTFLATGETANVVVSIQLAKV 208
>XP_003605674.2 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] AES87871.2 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 560
Score = 50.4 bits (119), Expect(2) = 2e-12
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFG+YVD+LN+F+++G+ NVVV I AK+ +FQ
Sbjct: 177 CTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQ 212
Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+V+GMLT VG ER +ERN + TKLNVI ++ DGY L
Sbjct: 140 DVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKL 175
>XP_003605675.1 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] AES87872.1 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 480
Score = 50.4 bits (119), Expect(2) = 2e-12
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFG+YVD+LN+F+++G+ NVVV I AK+ +FQ
Sbjct: 97 CTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQ 132
Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+V+GMLT VG ER +ERN + TKLNVI ++ DGY L
Sbjct: 60 DVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKL 95
>XP_003593181.2 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] AES63432.2 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 555
Score = 54.3 bits (129), Expect(2) = 7e-12
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFGSYVD LNSFI+SGD+ N +V+I AK FQ
Sbjct: 179 CTLFGSYVDDLNSFIASGDIPNAIVIIQLAKAKSFQ 214
Score = 43.1 bits (100), Expect(2) = 7e-12
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+++G+LT VG ER ERN +TKLNVIEL+ G+ +
Sbjct: 142 DIIGVLTGVGSERELERNGNMTKLNVIELEAGGFKI 177
>XP_013446466.1 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] KEH20493.1 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 555
Score = 54.3 bits (129), Expect(2) = 7e-12
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFGSYVD LNSFI+SGD+ N +V+I AK FQ
Sbjct: 179 CTLFGSYVDDLNSFIASGDIPNAIVIIQLAKAKSFQ 214
Score = 43.1 bits (100), Expect(2) = 7e-12
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+++G+LT VG ER ERN +TKLNVIEL+ G+ +
Sbjct: 142 DIIGVLTGVGSERELERNGNMTKLNVIELEAGGFKI 177
>XP_003600269.1 DUF223 domain protein [Medicago truncatula] AES70520.1 DUF223
domain protein [Medicago truncatula]
Length = 323
Score = 48.5 bits (114), Expect(2) = 2e-11
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+V+GMLT VG ER +ERN + TKLNVI ++ DGY L
Sbjct: 140 DVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKL 175
Score = 47.8 bits (112), Expect(2) = 2e-11
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMF 6
CTLFG+YVD+LN+F+++G+ NVVV I AK+ F
Sbjct: 177 CTLFGTYVDELNTFLATGETANVVVSIQLAKVKRF 211
>XP_007149762.1 hypothetical protein PHAVU_005G096800g [Phaseolus vulgaris]
ESW21756.1 hypothetical protein PHAVU_005G096800g
[Phaseolus vulgaris]
Length = 457
Score = 55.1 bits (131), Expect(2) = 3e-11
Identities = 23/32 (71%), Positives = 30/32 (93%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKI 15
CTLFG+YVD+LN+FISSGDVEN+V+ + FAK+
Sbjct: 134 CTLFGNYVDELNTFISSGDVENIVIRVHFAKV 165
Score = 40.0 bits (92), Expect(2) = 3e-11
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGY 119
+V+G+LT VG ER R+ + TKLN I ++ DGY
Sbjct: 97 DVIGILTGVGTERELNRSSSTTKLNAISIEADGY 130
>XP_013463919.1 animal RPA1 domain protein [Medicago truncatula] KEH37954.1 animal
RPA1 domain protein [Medicago truncatula]
Length = 271
Score = 53.1 bits (126), Expect(2) = 3e-11
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CT FGSYVD LNSFI+SGD++N +V+I AK FQ
Sbjct: 179 CTFFGSYVDDLNSFIASGDIQNAMVIIQLAKAKSFQ 214
Score = 42.0 bits (97), Expect(2) = 3e-11
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+++G+LT VG ER ERN +TKLNVIEL+ G+ +
Sbjct: 142 DIIGVLTGVGSERERERNGNMTKLNVIELEAGGFKI 177
>XP_013455287.1 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] KEH29318.1 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 417
Score = 50.4 bits (119), Expect(2) = 6e-11
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFG+YVD+LN+F+++G+ NVVV I AK+ +FQ
Sbjct: 34 CTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQ 69
Score = 43.9 bits (102), Expect(2) = 6e-11
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 208 MLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
MLT VG ER +ERN + TKLNVI ++ DGY L
Sbjct: 1 MLTGVGTEREYERNGSATKLNVIAMEADGYKL 32
>XP_003629969.2 DUF223 domain protein [Medicago truncatula] AET04445.2 DUF223
domain protein [Medicago truncatula]
Length = 306
Score = 50.4 bits (119), Expect(2) = 2e-10
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = -1
Query: 116 FMCTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
F CTLFG YV++LNS +SS + +NVVV I+ K+ +FQ
Sbjct: 175 FKCTLFGEYVEELNSLLSSDESQNVVVAIMLTKVKLFQ 212
Score = 42.0 bits (97), Expect(2) = 2e-10
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGY 119
+V+G++ VG ER +ER TK+NVIELD++GY
Sbjct: 140 DVIGVIIGVGVEREYEREGTKTKMNVIELDSNGY 173
>GAU20673.1 hypothetical protein TSUD_230870 [Trifolium subterraneum]
Length = 531
Score = 53.9 bits (128), Expect(2) = 4e-10
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFG YVD+LN+FI +GDV N VV++ FAK FQ
Sbjct: 135 CTLFGQYVDELNTFIGAGDVNNAVVIVQFAKAKTFQ 170
Score = 37.4 bits (85), Expect(2) = 4e-10
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -2
Query: 220 NVMGMLTAVGEERTF-ERNDAVTKLNVIELDNDGYPL 113
+V+G LT VG+ER +N TKLNV+EL+ DG+ L
Sbjct: 97 DVIGFLTGVGQEREITNQNGTSTKLNVMELEADGHKL 133
>GAU42710.1 hypothetical protein TSUD_382460 [Trifolium subterraneum]
Length = 290
Score = 54.7 bits (130), Expect(2) = 8e-10
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1
Query: 113 MCTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
+CTLFG YVD+LN+FI +GDV N VV++ FAK FQ
Sbjct: 151 LCTLFGQYVDELNTFIGAGDVNNAVVIVQFAKAKTFQ 187
Score = 35.8 bits (81), Expect(2) = 8e-10
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 220 NVMGMLTAVGEERTF-ERNDAVTKLNVIELDNDGYPL 113
+V+G LT VG+ER +N TKLNVIEL+ G+ L
Sbjct: 114 DVIGFLTGVGQEREITNQNGTSTKLNVIELEAHGHKL 150
>XP_007146146.1 hypothetical protein PHAVU_006G016100g [Phaseolus vulgaris]
ESW18140.1 hypothetical protein PHAVU_006G016100g
[Phaseolus vulgaris]
Length = 425
Score = 53.5 bits (127), Expect(2) = 1e-09
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFG+YVD+LN+F+SS +V+NVVV I F K+ +FQ
Sbjct: 193 CTLFGNYVDELNAFLSSAEVQNVVVSIEFGKVKVFQ 228
Score = 36.2 bits (82), Expect(2) = 1e-09
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGY 119
+++G+LT VG ER +++ KLNVI LD DG+
Sbjct: 156 DIIGVLTGVGIERKLQKDGRKIKLNVISLDCDGF 189
>XP_013445470.1 DUF223 domain protein [Medicago truncatula] KEH19496.1 DUF223
domain protein [Medicago truncatula]
Length = 222
Score = 45.8 bits (107), Expect(2) = 2e-09
Identities = 18/38 (47%), Positives = 30/38 (78%)
Frame = -1
Query: 116 FMCTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
F TLFG Y ++L+ F+++G++E VVVV+L AK+ ++Q
Sbjct: 118 FKVTLFGQYTEELDVFVAAGEIEKVVVVVLLAKVKIWQ 155
Score = 43.5 bits (101), Expect(2) = 2e-09
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGY 119
NVM MLT VG +R +ERN A TK+ +ELD DG+
Sbjct: 83 NVMSMLTGVGMQREYERNGAKTKMVAMELDYDGF 116
>GAU46627.1 hypothetical protein TSUD_284750 [Trifolium subterraneum]
Length = 526
Score = 51.6 bits (122), Expect(2) = 6e-09
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTL G YVD+LN+FI +GDV N VV++ FAK FQ
Sbjct: 136 CTLLGQYVDELNTFIGAGDVNNTVVIVQFAKAKTFQ 171
Score = 35.8 bits (81), Expect(2) = 6e-09
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 220 NVMGMLTAVGEERTF-ERNDAVTKLNVIELDNDGYPL 113
+V+G LT VG+ER +N TKLNVIEL+ G+ L
Sbjct: 98 DVIGFLTGVGQEREITNQNGTSTKLNVIELEAHGHKL 134
>XP_003595821.1 DUF223 domain protein [Medicago truncatula] ABN08131.1 Nucleic
acid-binding, OB-fold, subgroup [Medicago truncatula]
AES66072.1 DUF223 domain protein [Medicago truncatula]
Length = 185
Score = 47.0 bits (110), Expect(2) = 6e-09
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = -1
Query: 116 FMCTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
F TLFG Y D+LN+F+++G+ V+VV+L AK+ ++Q
Sbjct: 132 FKVTLFGQYADELNAFVAAGETNKVIVVVLLAKVKIWQ 169
Score = 40.4 bits (93), Expect(2) = 6e-09
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGY 119
+VMGMLT VG +R +ERN A TK+ ++L+ DG+
Sbjct: 97 DVMGMLTGVGMQREYERNGAKTKMVAMKLNYDGF 130
>GAU47630.1 hypothetical protein TSUD_137600 [Trifolium subterraneum]
Length = 416
Score = 43.5 bits (101), Expect(2) = 1e-08
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
CTLFGS D LNSFI++ DV N VV+I AK FQ
Sbjct: 52 CTLFGSSCDDLNSFIATRDVYNAVVIIQPAKAKTFQ 87
Score = 43.1 bits (100), Expect(2) = 1e-08
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+V+G+LT VG ER E+N T+LNVI L+ DGY +
Sbjct: 15 DVIGVLTGVGSEREIEKNGGTTRLNVIALEVDGYKI 50
>XP_013452088.1 replication factor-A carboxy-terminal domain protein [Medicago
truncatula] KEH26116.1 replication factor-A
carboxy-terminal domain protein [Medicago truncatula]
Length = 428
Score = 45.4 bits (106), Expect(2) = 3e-08
Identities = 16/38 (42%), Positives = 30/38 (78%)
Frame = -1
Query: 116 FMCTLFGSYVDQLNSFISSGDVENVVVVILFAKITMFQ 3
F T+FG Y ++LN+F+++G+ + V+VV+L AK+ ++Q
Sbjct: 34 FKVTIFGQYAEELNAFVAAGETDKVIVVVLLAKVMIWQ 71
Score = 39.7 bits (91), Expect(2) = 3e-08
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2
Query: 214 MGMLTAVGEERTFERNDAVTKLNVIELDNDGY 119
MGMLT VG +R +E N A TK+ +ELD DG+
Sbjct: 1 MGMLTGVGTQREYELNGAKTKMVAMELDYDGF 32
>GAU28620.1 hypothetical protein TSUD_55640 [Trifolium subterraneum]
Length = 403
Score = 43.1 bits (100), Expect(2) = 6e-08
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -2
Query: 220 NVMGMLTAVGEERTFERNDAVTKLNVIELDNDGYPL 113
+V+G+LT VG ER E+N T+LNVI L+ DGY +
Sbjct: 60 DVIGVLTGVGSEREIEKNGGTTRLNVIALEVDGYKI 95
Score = 40.8 bits (94), Expect(2) = 6e-08
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 110 CTLFGSYVDQLNSFISSGDVEN 45
CTLFGSY D LNSFI++GDV N
Sbjct: 97 CTLFGSYCDDLNSFIATGDVHN 118