BLASTX nr result

ID: Glycyrrhiza28_contig00038669 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00038669
         (263 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_018456814.1 hypothetical protein [Bradyrhizobium sp. WSM4349]       59   2e-08
WP_008130470.1 phage terminase-like protein, large subunit [Brad...    59   3e-08
WP_071201882.1 terminase [Agrobacterium vitis] OHZ13084.1 termin...    54   2e-06
WP_041699085.1 terminase [Agrobacterium vitis] OHZ29447.1 termin...    54   2e-06
ACM39168.1 phage terminase-like protein large subunit [Agrobacte...    54   2e-06
WP_062206914.1 terminase [Aureimonas sp. AU12]                         52   9e-06

>WP_018456814.1 hypothetical protein [Bradyrhizobium sp. WSM4349]
          Length = 588

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 263 VGHCNVRFDENMNYVPAKKRSADSIDG 183
           VGHCNVRFDENMNYVPAKKRS DSIDG
Sbjct: 538 VGHCNVRFDENMNYVPAKKRSEDSIDG 564


>WP_008130470.1 phage terminase-like protein, large subunit [Bradyrhizobium sp.
           YR681] EJN15701.1 phage terminase-like protein, large
           subunit [Bradyrhizobium sp. YR681]
          Length = 588

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -1

Query: 263 VGHCNVRFDENMNYVPAKKRSADSIDG 183
           +GHCNVRFDENMNYVPAKKRS DSIDG
Sbjct: 538 IGHCNVRFDENMNYVPAKKRSEDSIDG 564


>WP_071201882.1 terminase [Agrobacterium vitis] OHZ13084.1 terminase [Agrobacterium
           vitis]
          Length = 446

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = -1

Query: 260 GHCNVRFDENMNYVPAKKRSADSIDG 183
           GHC VRFDEN+NY+PAKKRSAD IDG
Sbjct: 392 GHCAVRFDENLNYIPAKKRSADKIDG 417


>WP_041699085.1 terminase [Agrobacterium vitis] OHZ29447.1 terminase [Agrobacterium
           vitis]
          Length = 446

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = -1

Query: 260 GHCNVRFDENMNYVPAKKRSADSIDG 183
           GHC VRFDEN+NY+PAKKRSAD IDG
Sbjct: 392 GHCAVRFDENLNYIPAKKRSADKIDG 417


>ACM39168.1 phage terminase-like protein large subunit [Agrobacterium vitis S4]
          Length = 580

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = -1

Query: 260 GHCNVRFDENMNYVPAKKRSADSIDG 183
           GHC VRFDEN+NY+PAKKRSAD IDG
Sbjct: 526 GHCAVRFDENLNYIPAKKRSADKIDG 551


>WP_062206914.1 terminase [Aureimonas sp. AU12]
          Length = 451

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = -1

Query: 260 GHCNVRFDENMNYVPAKKRSADSIDG 183
           GHC VRFDEN+NYVPAKK SAD IDG
Sbjct: 396 GHCQVRFDENLNYVPAKKGSADKIDG 421


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