BLASTX nr result

ID: Glycyrrhiza28_contig00038608 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00038608
         (277 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_043855076.1 single-stranded DNA-binding protein [Bradyrhizobi...   116   5e-32
WP_024584972.1 MULTISPECIES: single-stranded DNA-binding protein...   116   5e-32
WP_011505046.1 single-stranded DNA-binding protein [Nitrobacter ...   115   1e-31
WP_012564767.1 single-stranded DNA-binding protein [Oligotropha ...   115   2e-31
WP_041359558.1 single-stranded DNA-binding protein [Nitrobacter ...   115   2e-31
WP_002719020.1 MULTISPECIES: hypothetical protein [Bradyrhizobia...   114   3e-31
WP_015822431.1 single-stranded DNA-binding protein [Methylobacte...   114   6e-31
WP_034462700.1 single-stranded DNA-binding protein [Afipia sp. P...   113   1e-30
WP_048758125.1 single-stranded DNA-binding protein [Afipia felis...   111   7e-30
ABE64883.1 single-strand binding protein/Primosomal replication ...   115   7e-30
WP_042002422.1 single-stranded DNA-binding protein [Streptomyces...   110   9e-30
WP_024921880.1 MULTISPECIES: single-stranded DNA-binding protein...   110   1e-29
WP_006023645.1 hypothetical protein [Afipia broomeae] EKS32927.1...   110   1e-29
WP_036363565.1 single-stranded DNA-binding protein [Microvirga l...    82   2e-18
SEF14928.1 Single-strand binding protein family protein [Rhizobi...    80   9e-18
SDR63807.1 Single-strand binding protein family protein [Rhizobi...    80   9e-18
SEF13146.1 Single-strand binding protein family protein [Rhizobi...    80   2e-17
SDR63410.1 Single-strand binding protein family protein [Rhizobi...    79   4e-17
SEF14919.1 Single-strand binding protein family protein [Rhizobi...    79   6e-17
SEF01611.1 Single-strand binding protein family protein [Rhizobi...    79   6e-17

>WP_043855076.1 single-stranded DNA-binding protein [Bradyrhizobium elkanii]
           KIU52647.1 single-stranded DNA-binding protein
           [Bradyrhizobium elkanii]
          Length = 110

 Score =  116 bits (291), Expect = 5e-32
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDDAHWNEVTIFTK+IQ+YV EHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE G
Sbjct: 41  KDDAHWNEVTIFTKAIQSYVSEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALELG 99


>WP_024584972.1 MULTISPECIES: single-stranded DNA-binding protein [Bradyrhizobium]
           KIU54039.1 single-stranded DNA-binding protein
           [Bradyrhizobium elkanii] OCX26006.1 single-stranded
           DNA-binding protein (plasmid) [Bradyrhizobium sp.
           UASWS1016]
          Length = 110

 Score =  116 bits (291), Expect = 5e-32
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDDAHWNEVTIFTK+IQ+YV EHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE G
Sbjct: 41  KDDAHWNEVTIFTKAIQSYVNEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALELG 99


>WP_011505046.1 single-stranded DNA-binding protein [Nitrobacter hamburgensis]
           ABE65100.1 single-strand binding protein/Primosomal
           replication protein n (plasmid) [Nitrobacter
           hamburgensis X14]
          Length = 110

 Score =  115 bits (288), Expect = 1e-31
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDDAHWNEVTIFTK+IQ+YV EH+SKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE G
Sbjct: 41  KDDAHWNEVTIFTKAIQSYVNEHLSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALELG 99


>WP_012564767.1 single-stranded DNA-binding protein [Oligotropha carboxidovorans]
           ACI94743.1 single-strand binding protein family
           [Oligotropha carboxidovorans OM5] AEI04575.1 putative
           single-stranded DNA-binding protein (plasmid)
           [Oligotropha carboxidovorans OM4] AEI08204.1 putative
           single-stranded DNA-binding protein (plasmid)
           [Oligotropha carboxidovorans OM5]
          Length = 110

 Score =  115 bits (287), Expect = 2e-31
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDDAHWNEVTIFTK+IQ+YV EHVSKGDLVHVRGRLRQNS+ERDGQRVYTVDLIALE G
Sbjct: 41  KDDAHWNEVTIFTKAIQSYVSEHVSKGDLVHVRGRLRQNSYERDGQRVYTVDLIALEVG 99


>WP_041359558.1 single-stranded DNA-binding protein [Nitrobacter hamburgensis]
          Length = 110

 Score =  115 bits (287), Expect = 2e-31
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDDAHWNEVTIFTK+IQ+YV EHVSKGDLVHVRGRLRQNS+ERDGQRVYTVDLIALE G
Sbjct: 41  KDDAHWNEVTIFTKAIQSYVSEHVSKGDLVHVRGRLRQNSYERDGQRVYTVDLIALEVG 99


>WP_002719020.1 MULTISPECIES: hypothetical protein [Bradyrhizobiaceae] EKS26844.1
           hypothetical protein HMPREF9697_03960 [Afipia felis ATCC
           53690] KIZ48200.1 single-stranded DNA-binding protein
           [Rhodopseudomonas palustris] KQW18153.1 single-stranded
           DNA-binding protein [Afipia sp. Root123D2]
          Length = 110

 Score =  114 bits (286), Expect = 3e-31
 Identities = 53/59 (89%), Positives = 56/59 (94%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDDAHWNEVTIFTK+IQ+YV EH+SKGDLVHVRGRLRQNSFERDGQRVYTVDLI LE G
Sbjct: 41  KDDAHWNEVTIFTKAIQSYVNEHISKGDLVHVRGRLRQNSFERDGQRVYTVDLIGLELG 99


>WP_015822431.1 single-stranded DNA-binding protein [Methylobacterium extorquens]
           CAX24240.1 putative single-strand binding
           protein/primosomal replication protein [Methylobacterium
           extorquens DM4]
          Length = 110

 Score =  114 bits (284), Expect = 6e-31
 Identities = 52/59 (88%), Positives = 57/59 (96%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDDAHWNEVTIFTK+IQ+YV +HVSKGDL+HVRGR+RQNSFERDGQRVYTVDLIALE G
Sbjct: 41  KDDAHWNEVTIFTKAIQSYVSDHVSKGDLIHVRGRIRQNSFERDGQRVYTVDLIALEVG 99


>WP_034462700.1 single-stranded DNA-binding protein [Afipia sp. P52-10] ETR79458.1
           single-stranded DNA-binding protein [Afipia sp. P52-10]
          Length = 110

 Score =  113 bits (282), Expect = 1e-30
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDD HWNEVTIFTKSIQ YV EHVSKGDLVHVRGR+RQNS+ERDGQR+YTVDLI LEFG
Sbjct: 41  KDDQHWNEVTIFTKSIQDYVNEHVSKGDLVHVRGRVRQNSYERDGQRIYTVDLIGLEFG 99


>WP_048758125.1 single-stranded DNA-binding protein [Afipia felis] CEG10454.1
           single-stranded DNA-binding protein [Afipia felis]
          Length = 110

 Score =  111 bits (277), Expect = 7e-30
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDD HWNEVTIFT +IQ+YV EHVSKGDLVHVRGRLRQNSFERDGQR+YTVDLI LE G
Sbjct: 41  KDDTHWNEVTIFTNAIQSYVNEHVSKGDLVHVRGRLRQNSFERDGQRIYTVDLIGLELG 99


>ABE64883.1 single-strand binding protein/Primosomal replication protein n
           (plasmid) [Nitrobacter hamburgensis X14]
          Length = 242

 Score =  115 bits (287), Expect = 7e-30
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           KDDAHWNEVTIFTK+IQ+YV EHVSKGDLVHVRGRLRQNS+ERDGQRVYTVDLIALE G
Sbjct: 173 KDDAHWNEVTIFTKAIQSYVSEHVSKGDLVHVRGRLRQNSYERDGQRVYTVDLIALEVG 231


>WP_042002422.1 single-stranded DNA-binding protein [Streptomyces sp. AcH 505]
           KIF65908.1 single-stranded DNA-binding protein
           [Streptomyces sp. AcH 505]
          Length = 110

 Score =  110 bits (276), Expect = 9e-30
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           +DDAHWNEVTIFTK+IQ+YV EHVSKGDLVHVRGRLRQ+SFERDGQRVYTVDLIA E G
Sbjct: 41  RDDAHWNEVTIFTKAIQSYVSEHVSKGDLVHVRGRLRQSSFERDGQRVYTVDLIAHELG 99


>WP_024921880.1 MULTISPECIES: single-stranded DNA-binding protein [Afipia]
          Length = 110

 Score =  110 bits (275), Expect = 1e-29
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +3

Query: 6   DDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           DD HWNEVTIFTKSIQ YV EHVSKGDLVH RGRLRQNS+ERDG+R+YTVDLIALEFG
Sbjct: 42  DDQHWNEVTIFTKSIQGYVNEHVSKGDLVHARGRLRQNSYERDGKRIYTVDLIALEFG 99


>WP_006023645.1 hypothetical protein [Afipia broomeae] EKS32927.1 hypothetical
           protein HMPREF9695_04942 [Afipia broomeae ATCC 49717]
          Length = 110

 Score =  110 bits (275), Expect = 1e-29
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +3

Query: 6   DDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEFG 179
           DD HWNEVTIFTKSIQ YV EHVSKGDLVH RGRLRQNS+ERDG+R+YTVDLIALEFG
Sbjct: 42  DDQHWNEVTIFTKSIQGYVNEHVSKGDLVHARGRLRQNSYERDGKRIYTVDLIALEFG 99


>WP_036363565.1 single-stranded DNA-binding protein [Microvirga lupini]
          Length = 110

 Score = 82.4 bits (202), Expect = 2e-18
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +3

Query: 6   DDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALEF 176
           DD H+N VT+F +  QTY+ +HV  GDLVHVRGR+RQNS+E+ G+ VYT+DLI  EF
Sbjct: 41  DDPHYNTVTVFNERTQTYIADHVGTGDLVHVRGRIRQNSYEKSGETVYTIDLICDEF 97


>SEF14928.1 Single-strand binding protein family protein [Rhizobiales bacterium
           GAS191]
          Length = 110

 Score = 80.5 bits (197), Expect = 9e-18
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE 173
           KD  HWNEVTIF  S++ YV++H+SKGDLVH RGR++QNS+ +D +  YTVDLI +E
Sbjct: 41  KDATHWNEVTIFQDSMRGYVQKHLSKGDLVHARGRIKQNSYVKDDETRYTVDLICME 97


>SDR63807.1 Single-strand binding protein family protein [Rhizobiales bacterium
           GAS113]
          Length = 110

 Score = 80.5 bits (197), Expect = 9e-18
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE 173
           KD+ HWNEVTIF  S++ YV++H+SKGDLVH RGR++QNS+ +D +  YTVDLI  E
Sbjct: 41  KDNTHWNEVTIFQDSMRGYVQKHLSKGDLVHARGRIKQNSYVKDDETRYTVDLICTE 97


>SEF13146.1 Single-strand binding protein family protein [Rhizobiales bacterium
           GAS191]
          Length = 113

 Score = 79.7 bits (195), Expect = 2e-17
 Identities = 34/57 (59%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE 173
           KD  HWNEVTIF  S++ YV++H+SKGDLVH RGR++QNS+ +D +  +TVDLI +E
Sbjct: 41  KDSTHWNEVTIFQDSMRGYVQKHLSKGDLVHARGRIKQNSYVKDDETRFTVDLICME 97


>SDR63410.1 Single-strand binding protein family protein [Rhizobiales bacterium
           GAS113]
          Length = 113

 Score = 79.0 bits (193), Expect = 4e-17
 Identities = 33/57 (57%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE 173
           KD  HWNEVTIF  S++ YV++H++KGDLVH RGR++QNS+ +D +  YTVDL+ +E
Sbjct: 41  KDATHWNEVTIFQDSMRGYVQKHLAKGDLVHARGRIKQNSYVKDDETRYTVDLVCME 97


>SEF14919.1 Single-strand binding protein family protein [Rhizobiales bacterium
           GAS191]
          Length = 113

 Score = 78.6 bits (192), Expect = 6e-17
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE 173
           KD  HWNEVTIF  S++ YV++H+ KGDLVH RGR++QNS+ +D +  +TVDLI +E
Sbjct: 41  KDSTHWNEVTIFQDSMRGYVQKHLGKGDLVHARGRIKQNSYVKDNETRFTVDLICME 97


>SEF01611.1 Single-strand binding protein family protein [Rhizobiales bacterium
           GAS188]
          Length = 113

 Score = 78.6 bits (192), Expect = 6e-17
 Identities = 33/57 (57%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   KDDAHWNEVTIFTKSIQTYVKEHVSKGDLVHVRGRLRQNSFERDGQRVYTVDLIALE 173
           KD  HWNEVTIF  S++ YV++H+SKGDLVH RGR++QNS+ +D +  +TVDLI ++
Sbjct: 41  KDSTHWNEVTIFQDSMRGYVQKHLSKGDLVHARGRIKQNSYVKDDETRFTVDLICMD 97


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