BLASTX nr result
ID: Glycyrrhiza28_contig00038577
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00038577
(315 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KTS04294.1 integrase [Methylobacterium radiotolerans] KTS47312.1... 199 2e-60
SFI50925.1 Transposase [Methylobacterium brachiatum] 198 4e-60
WP_003602196.1 integrase [Methylobacterium extorquens] EHP91325.... 195 6e-59
WP_076611115.1 IS21 family transposase ISMex13 [Methylobacterium... 195 2e-58
SFM87966.1 DNA replication protein DnaC [Methylobacterium pseudo... 197 1e-57
SFV16197.1 Integrase core domain-containing protein [Methylobact... 160 7e-49
WP_029356448.1 integrase [Mesorhizobium ciceri] 169 8e-49
WP_036357971.1 transposase [Microvirga lupini] 160 2e-47
WP_024586538.1 integrase [Aliihoeflea sp. 2WW] 165 2e-47
SDG87791.1 Transposase [Pelagibacterium luteolum] 159 3e-47
WP_016844266.1 integrase [Bradyrhizobium elkanii] OIM88754.1 int... 164 3e-47
SES20178.1 Winged helix-turn helix [Sphingobium sp. YR768] 153 2e-45
ABD25900.1 Integrase [Novosphingobium aromaticivorans DSM 12444] 157 1e-44
WP_063976784.1 hypothetical protein [Sphingobium yanoikuyae] OAH... 155 2e-44
WP_051035722.1 hypothetical protein [alpha proteobacterium LLX12A] 155 2e-44
WP_041550834.1 integrase [Novosphingobium aromaticivorans] SCY07... 157 2e-44
WP_067739295.1 integrase [Novosphingobium naphthalenivorans] 157 2e-44
WP_046764955.1 integrase [Sphingobium chungbukense] KKW89926.1 i... 157 2e-44
WP_013041153.1 integrase [Sphingobium japonicum] BAI97866.1 puta... 157 2e-44
BAV63051.1 integrase [Sphingobium cloacae] BAV63421.1 integrase ... 156 5e-44
>KTS04294.1 integrase [Methylobacterium radiotolerans] KTS47312.1 integrase
[Methylobacterium radiotolerans]
Length = 421
Score = 199 bits (505), Expect = 2e-60
Identities = 98/104 (94%), Positives = 100/104 (96%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVT 134
DLSAVRLTRELRER YTGAYTAVKRFVAA RP EAKPYEVRFETPAGQQAQVDFARFVVT
Sbjct: 74 DLSAVRLTRELRERGYTGAYTAVKRFVAATRPPEAKPYEVRFETPAGQQAQVDFARFVVT 133
Query: 133 FTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTDAPG++CIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHM A
Sbjct: 134 FTDAPGASCIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMQA 177
>SFI50925.1 Transposase [Methylobacterium brachiatum]
Length = 421
Score = 198 bits (503), Expect = 4e-60
Identities = 97/104 (93%), Positives = 100/104 (96%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVT 134
DLSAVRLTRELRER YTGAYTAVKRFVAAIRP EAKPYEVRFETPAGQQAQVDFARFVVT
Sbjct: 74 DLSAVRLTRELRERGYTGAYTAVKRFVAAIRPPEAKPYEVRFETPAGQQAQVDFARFVVT 133
Query: 133 FTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTDAPG+ CIVWLFSLVLGHSRHIEARFVLHQDLQTL+RCH+ A
Sbjct: 134 FTDAPGATCIVWLFSLVLGHSRHIEARFVLHQDLQTLMRCHIQA 177
>WP_003602196.1 integrase [Methylobacterium extorquens] EHP91325.1 Integrase
catalytic region [Methylobacterium extorquens DSM 13060]
Length = 421
Score = 195 bits (495), Expect = 6e-59
Identities = 96/104 (92%), Positives = 98/104 (94%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVT 134
DLSAVRLTRELRER YTGAYTAVKRF AAIRP EAKPYEVRFETPAGQQAQVDFARF+VT
Sbjct: 74 DLSAVRLTRELRERGYTGAYTAVKRFAAAIRPPEAKPYEVRFETPAGQQAQVDFARFLVT 133
Query: 133 FTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTDAP + CIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHM A
Sbjct: 134 FTDAPDTTCIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMQA 177
>WP_076611115.1 IS21 family transposase ISMex13 [Methylobacterium extorquens]
Length = 463
Score = 195 bits (495), Expect = 2e-58
Identities = 96/104 (92%), Positives = 98/104 (94%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVT 134
DLSAVRLTRELRER YTGAYTAVKRF AAIRP EAKPYEVRFETPAGQQAQVDFARF+VT
Sbjct: 116 DLSAVRLTRELRERGYTGAYTAVKRFAAAIRPPEAKPYEVRFETPAGQQAQVDFARFLVT 175
Query: 133 FTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTDAP + CIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHM A
Sbjct: 176 FTDAPDTTCIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMQA 219
>SFM87966.1 DNA replication protein DnaC [Methylobacterium pseudosasicola]
Length = 700
Score = 197 bits (501), Expect = 1e-57
Identities = 96/104 (92%), Positives = 101/104 (97%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVT 134
DLSAVRLTRELRER YTGAYTAVKRF+AAI+P EAKPYEVRFETP+GQQAQVDFARFVVT
Sbjct: 66 DLSAVRLTRELRERGYTGAYTAVKRFIAAIQPPEAKPYEVRFETPSGQQAQVDFARFVVT 125
Query: 133 FTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTDAPG+ACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCH+ A
Sbjct: 126 FTDAPGTACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHIQA 169
>SFV16197.1 Integrase core domain-containing protein [Methylobacterium sp.
174MFSha1.1]
Length = 120
Score = 160 bits (404), Expect = 7e-49
Identities = 77/82 (93%), Positives = 79/82 (96%)
Frame = -3
Query: 247 VKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVTFTDAPGSACIVWLFSLVLGHSR 68
+KRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVTFTDAP + CIVWLFSLVLGHSR
Sbjct: 1 MKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVTFTDAPDTTCIVWLFSLVLGHSR 60
Query: 67 HIEARFVLHQDLQTLLRCHMHA 2
HIEARFVLHQDLQTLLRCHM A
Sbjct: 61 HIEARFVLHQDLQTLLRCHMQA 82
>WP_029356448.1 integrase [Mesorhizobium ciceri]
Length = 420
Score = 169 bits (427), Expect = 8e-49
Identities = 86/105 (81%), Positives = 92/105 (87%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAE-AKPYEVRFETPAGQQAQVDFARFVV 137
DLSAVRLTRE+RER Y GAYTAVKRFVAAIRP E +P+EVRFETPAG QAQVDFARFV
Sbjct: 74 DLSAVRLTREIRERGYDGAYTAVKRFVAAIRPQEQVRPFEVRFETPAGYQAQVDFARFVT 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTDAPG IVWLFSLVLGHSR+I AR+V+HQDLQTLLRCHM A
Sbjct: 134 EFTDAPGVIRIVWLFSLVLGHSRYILARYVMHQDLQTLLRCHMQA 178
>WP_036357971.1 transposase [Microvirga lupini]
Length = 223
Score = 160 bits (404), Expect = 2e-47
Identities = 82/105 (78%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DLSAVRLTRE+RER Y GAYTAVKRF+ A RPA+ KP+E RFETPAGQ+AQVDFARFV
Sbjct: 47 DLSAVRLTREIRERGYEGAYTAVKRFLCAARPADRPKPFEARFETPAGQRAQVDFARFVT 106
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD P I+WLFSLVLGHSR I ARFVLHQDLQTLLRCHM A
Sbjct: 107 VFTDQPEITRIIWLFSLVLGHSRSIFARFVLHQDLQTLLRCHMLA 151
>WP_024586538.1 integrase [Aliihoeflea sp. 2WW]
Length = 419
Score = 165 bits (418), Expect = 2e-47
Identities = 85/105 (80%), Positives = 91/105 (86%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPA-EAKPYEVRFETPAGQQAQVDFARFVV 137
DLSA RLTRE+RE Y GAYTAVKR++AAIRP E KPYEVRFETPAG QAQVDFARFVV
Sbjct: 74 DLSAARLTREIRELGYVGAYTAVKRYLAAIRPENEPKPYEVRFETPAGVQAQVDFARFVV 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG++ IVWLFSLVLGHSR I AR+VLHQDLQTLLRCHM A
Sbjct: 134 DFTDDPGTSRIVWLFSLVLGHSRFIFARYVLHQDLQTLLRCHMQA 178
>SDG87791.1 Transposase [Pelagibacterium luteolum]
Length = 228
Score = 159 bits (403), Expect = 3e-47
Identities = 81/105 (77%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRP-AEAKPYEVRFETPAGQQAQVDFARFVV 137
+LSA RLTRE+RE YTGAYTAVKR++AAIRP + KPYEVRFETP G QAQVDFARFVV
Sbjct: 74 ELSAARLTREIRELGYTGAYTAVKRYLAAIRPEGQPKPYEVRFETPPGVQAQVDFARFVV 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
F D PG + IVWLFSLVLGHSR + AR+VLHQDLQTLLRCHM A
Sbjct: 134 EFADEPGVSRIVWLFSLVLGHSRFLFARYVLHQDLQTLLRCHMQA 178
>WP_016844266.1 integrase [Bradyrhizobium elkanii] OIM88754.1 integrase
[Bradyrhizobium elkanii]
Length = 420
Score = 164 bits (416), Expect = 3e-47
Identities = 84/105 (80%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DLSAVRLTRELRE YTGAYTAVKRF AAIRP KP+EVRFETPAG+QAQVDFARFV
Sbjct: 74 DLSAVRLTRELREHGYTGAYTAVKRFAAAIRPDHVPKPFEVRFETPAGKQAQVDFARFVS 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG I+WLFS+VLGHSR I ARFV+HQDLQTLLRCHM A
Sbjct: 134 IFTDEPGVTRIIWLFSMVLGHSRFIFARFVMHQDLQTLLRCHMQA 178
>SES20178.1 Winged helix-turn helix [Sphingobium sp. YR768]
Length = 180
Score = 153 bits (387), Expect = 2e-45
Identities = 78/105 (74%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DL+A RLTRE+RE Y GAYTAVKR++AAIRP KP+EVRFETP G QAQVDFARFVV
Sbjct: 74 DLTASRLTREIREMGYMGAYTAVKRYLAAIRPENGPKPFEVRFETPPGVQAQVDFARFVV 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG + IVWLFSLVLGHSR + R+V+HQDLQTLLRCHM A
Sbjct: 134 HFTDEPGISRIVWLFSLVLGHSRFLFGRYVMHQDLQTLLRCHMMA 178
>ABD25900.1 Integrase [Novosphingobium aromaticivorans DSM 12444]
Length = 410
Score = 157 bits (398), Expect = 1e-44
Identities = 79/104 (75%), Positives = 87/104 (83%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVT 134
DL+A RLTRE+RE Y GAYTAVKR++AAIRP KPYEVRFET AG Q QVDFARFVV
Sbjct: 67 DLTASRLTREIREMGYAGAYTAVKRYLAAIRPEHPKPYEVRFETKAGVQGQVDFARFVVE 126
Query: 133 FTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG A IVWLFS+VLG+SR + AR+VLHQDLQTLLRCHM A
Sbjct: 127 FTDEPGVARIVWLFSMVLGYSRLLFARYVLHQDLQTLLRCHMQA 170
>WP_063976784.1 hypothetical protein [Sphingobium yanoikuyae] OAH42028.1
hypothetical protein AX777_22345 [Sphingobium
yanoikuyae]
Length = 323
Score = 155 bits (392), Expect = 2e-44
Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DL+A RLTRE+RE Y GAYTAVKRF+AAIRP KP+EVRFETP G QAQVDFARFVV
Sbjct: 74 DLTAARLTREIRELGYMGAYTAVKRFLAAIRPENGPKPFEVRFETPPGIQAQVDFARFVV 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
F D PG + IVWLFSLVLGHSR + AR+V+HQDLQTLLRCHM A
Sbjct: 134 DFADEPGISRIVWLFSLVLGHSRFLFARYVMHQDLQTLLRCHMQA 178
>WP_051035722.1 hypothetical protein [alpha proteobacterium LLX12A]
Length = 323
Score = 155 bits (392), Expect = 2e-44
Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DL+A RLTRE+RE Y GAYTAVKRF+AAIRP KP+EVRFETP G QAQVDFARFVV
Sbjct: 74 DLTAARLTREIRELGYMGAYTAVKRFLAAIRPENGPKPFEVRFETPPGIQAQVDFARFVV 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
F D PG + IVWLFSLVLGHSR + AR+V+HQDLQTLLRCHM A
Sbjct: 134 DFADEPGISRIVWLFSLVLGHSRFLFARYVMHQDLQTLLRCHMQA 178
>WP_041550834.1 integrase [Novosphingobium aromaticivorans] SCY07242.1 Transposase
[Novosphingobium stygium]
Length = 417
Score = 157 bits (398), Expect = 2e-44
Identities = 79/104 (75%), Positives = 87/104 (83%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEAKPYEVRFETPAGQQAQVDFARFVVT 134
DL+A RLTRE+RE Y GAYTAVKR++AAIRP KPYEVRFET AG Q QVDFARFVV
Sbjct: 74 DLTASRLTREIREMGYAGAYTAVKRYLAAIRPEHPKPYEVRFETKAGVQGQVDFARFVVE 133
Query: 133 FTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG A IVWLFS+VLG+SR + AR+VLHQDLQTLLRCHM A
Sbjct: 134 FTDEPGVARIVWLFSMVLGYSRLLFARYVLHQDLQTLLRCHMQA 177
>WP_067739295.1 integrase [Novosphingobium naphthalenivorans]
Length = 420
Score = 157 bits (398), Expect = 2e-44
Identities = 80/105 (76%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DL+A RLTRE+RE Y GAYTAVKRF+AAIRP KP+EVRFETP G QAQVDFARFVV
Sbjct: 74 DLTAARLTREIRELGYMGAYTAVKRFLAAIRPENGPKPFEVRFETPPGVQAQVDFARFVV 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG + IVWLFSLVLGHSR + AR+V+HQDLQTLLRCHM A
Sbjct: 134 EFTDEPGVSRIVWLFSLVLGHSRFLFARYVMHQDLQTLLRCHMQA 178
>WP_046764955.1 integrase [Sphingobium chungbukense] KKW89926.1 integrase
[Sphingobium chungbukense] KKW90853.1 integrase
[Sphingobium chungbukense]
Length = 420
Score = 157 bits (398), Expect = 2e-44
Identities = 80/105 (76%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DL+A RLTRE+RE Y GAYTAVKRF+AAIRP KP+EVRFETP G QAQVDFARFVV
Sbjct: 74 DLTAARLTREIRELGYMGAYTAVKRFLAAIRPENGPKPFEVRFETPPGVQAQVDFARFVV 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG + IVWLFSLVLGHSR + AR+V+HQDLQTLLRCHM A
Sbjct: 134 DFTDEPGISRIVWLFSLVLGHSRFLFARYVMHQDLQTLLRCHMQA 178
>WP_013041153.1 integrase [Sphingobium japonicum] BAI97866.1 putative transposase
[Sphingobium japonicum UT26S]
Length = 420
Score = 157 bits (397), Expect = 2e-44
Identities = 79/105 (75%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DL+A RLTRE+RE Y GAYTAVKRF+AAIRP KP+EVRFETP G QAQ+DFARFVV
Sbjct: 74 DLTAARLTREIRELGYMGAYTAVKRFLAAIRPENGPKPFEVRFETPPGVQAQIDFARFVV 133
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG + IVWLFSLVLGHSR + AR+V+HQDLQTLLRCHM A
Sbjct: 134 DFTDEPGVSRIVWLFSLVLGHSRFLFARYVMHQDLQTLLRCHMQA 178
>BAV63051.1 integrase [Sphingobium cloacae] BAV63421.1 integrase [Sphingobium
cloacae] BAV63741.1 integrase [Sphingobium cloacae]
BAV64228.1 integrase [Sphingobium cloacae] BAV65204.1
integrase catalytic subunit [Sphingobium cloacae]
BAV65322.1 integrase catalytic subunit [Sphingobium
cloacae] BAV65505.1 integrase catalytic subunit
[Sphingobium cloacae] BAV65542.1 integrase catalytic
subunit [Sphingobium cloacae] BAV66875.1 integrase
(plasmid) [Sphingobium cloacae]
Length = 412
Score = 156 bits (394), Expect = 5e-44
Identities = 79/105 (75%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Frame = -3
Query: 313 DLSAVRLTRELRERVYTGAYTAVKRFVAAIRPAEA-KPYEVRFETPAGQQAQVDFARFVV 137
DL+A RLTRE+RE Y GAYTAVKRF+AAIRP KP+EVRFETP G QAQVDFARFVV
Sbjct: 66 DLTAARLTREIRELGYMGAYTAVKRFLAAIRPENGPKPFEVRFETPPGVQAQVDFARFVV 125
Query: 136 TFTDAPGSACIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMHA 2
FTD PG + IVWLFSLVLGHSR + AR+V+HQDLQ+LLRCHM A
Sbjct: 126 EFTDEPGVSRIVWLFSLVLGHSRFLFARYVMHQDLQSLLRCHMQA 170