BLASTX nr result

ID: Glycyrrhiza28_contig00038463 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00038463
         (298 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SEE17684.1 iron complex outermembrane recepter protein [Bradyrhi...   125   2e-31
ERF86697.1 3-vinyl bacteriochlorophyllide hydratase [Bradyrhizob...   124   4e-31
SDF41671.1 iron complex outermembrane recepter protein [Bradyrhi...   107   5e-25
OKO67200.1 ligand-gated channel protein, partial [Bradyrhizobium...   104   1e-24
WP_076826026.1 ligand-gated channel protein [Bradyrhizobium sp. ...    87   5e-18
WP_024580284.1 MULTISPECIES: ligand-gated channel protein [Brady...    55   8e-07
ABJ06755.1 TonB-dependent receptor [Rhodopseudomonas palustris B...    53   7e-06

>SEE17684.1 iron complex outermembrane recepter protein [Bradyrhizobium
           erythrophlei]
          Length = 847

 Score =  125 bits (314), Expect = 2e-31
 Identities = 64/98 (65%), Positives = 70/98 (71%)
 Frame = +3

Query: 3   PVTVIAPSPLAGTRSTRPXXXXXXXXXXXXXXXXXXXXXXXXXEGGIGVPSPSERDSSLI 182
           PVTVIAPSPL+GTRS +P                         EGG GVPSPS+RDSSL+
Sbjct: 50  PVTVIAPSPLSGTRSIKPAARPVVRTSRTARTRAAPAQTAAAPEGGTGVPSPSDRDSSLL 109

Query: 183 DRDKVPSNTEVLTSTDFSRNYSTNFLDSVNRRLPGVTL 296
           DRDK+PSNTEVLTS DFSRNYSTNFLDSVNR+LPGVTL
Sbjct: 110 DRDKIPSNTEVLTSADFSRNYSTNFLDSVNRKLPGVTL 147


>ERF86697.1 3-vinyl bacteriochlorophyllide hydratase [Bradyrhizobium sp.
           DFCI-1]
          Length = 848

 Score =  124 bits (312), Expect = 4e-31
 Identities = 65/98 (66%), Positives = 69/98 (70%)
 Frame = +3

Query: 3   PVTVIAPSPLAGTRSTRPXXXXXXXXXXXXXXXXXXXXXXXXXEGGIGVPSPSERDSSLI 182
           PVTVIAPSPL+GTRS +P                         EGG GVP PSERD+SLI
Sbjct: 50  PVTVIAPSPLSGTRSIKPAAKPVVQTSRTARTRAAPAQTAAAPEGGTGVPGPSERDASLI 109

Query: 183 DRDKVPSNTEVLTSTDFSRNYSTNFLDSVNRRLPGVTL 296
           DRDKVPSNTEVLTS DFSRNYSTNFLDSVNR+LPGVTL
Sbjct: 110 DRDKVPSNTEVLTSDDFSRNYSTNFLDSVNRKLPGVTL 147


>SDF41671.1 iron complex outermembrane recepter protein [Bradyrhizobium sp. R5]
          Length = 892

 Score =  107 bits (267), Expect = 5e-25
 Identities = 55/98 (56%), Positives = 63/98 (64%)
 Frame = +3

Query: 3   PVTVIAPSPLAGTRSTRPXXXXXXXXXXXXXXXXXXXXXXXXXEGGIGVPSPSERDSSLI 182
           PV VIAP+PLAGTRS RP                         + G   P PS+RDS+LI
Sbjct: 92  PVNVIAPTPLAGTRSARPTAWPVVRTTRTARTRTGPVAPAAGPDVGTAAPGPSDRDSTLI 151

Query: 183 DRDKVPSNTEVLTSTDFSRNYSTNFLDSVNRRLPGVTL 296
           DRDKVPSNT V+T+ DFS NYSTNFLD+VNR+LPGVTL
Sbjct: 152 DRDKVPSNTAVMTTQDFSHNYSTNFLDAVNRKLPGVTL 189


>OKO67200.1 ligand-gated channel protein, partial [Bradyrhizobium sp. NAS96.2]
          Length = 381

 Score =  104 bits (259), Expect = 1e-24
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = +3

Query: 132 EGGIGVPSPSERDSSLIDRDKVPSNTEVLTSTDFSRNYSTNFLDSVNRRLPGVTL 296
           EGG GVP PSERDSSL+DRDK+PSNTEVLTS DFSRNYSTNFLDSVNR+LPGVTL
Sbjct: 1   EGGAGVPGPSERDSSLLDRDKIPSNTEVLTSADFSRNYSTNFLDSVNRKLPGVTL 55


>WP_076826026.1 ligand-gated channel protein [Bradyrhizobium sp. UFLA 03-321]
           OMI12589.1 ligand-gated channel protein [Bradyrhizobium
           sp. UFLA 03-321]
          Length = 779

 Score = 87.4 bits (215), Expect = 5e-18
 Identities = 40/53 (75%), Positives = 46/53 (86%)
 Frame = +3

Query: 138 GIGVPSPSERDSSLIDRDKVPSNTEVLTSTDFSRNYSTNFLDSVNRRLPGVTL 296
           G   P PS+RDS+LIDRDKVPSNT V+T+ DFS NYSTNFLD+VNR+LPGVTL
Sbjct: 24  GTAAPGPSDRDSTLIDRDKVPSNTAVMTTQDFSHNYSTNFLDAVNRKLPGVTL 76


>WP_024580284.1 MULTISPECIES: ligand-gated channel protein [Bradyrhizobium]
           KIU45003.1 ligand-gated channel protein [Bradyrhizobium
           elkanii] OCX26798.1 ligand-gated channel protein
           [Bradyrhizobium sp. UASWS1016]
          Length = 733

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +3

Query: 216 LTSTDFSRNYSTNFLDSVNRRLPGVTL 296
           +TSTDFSRNYSTNFLDSVNR+LPGVTL
Sbjct: 1   MTSTDFSRNYSTNFLDSVNRKLPGVTL 27


>ABJ06755.1 TonB-dependent receptor [Rhodopseudomonas palustris BisA53]
          Length = 785

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = +3

Query: 180 IDRDKVPSNTEVLTSTDFSRNYSTNFLDSVNRRLPGVTL 296
           +DRDK+PSNT  ++STD  R+YS N  D++ +R+PGVTL
Sbjct: 53  VDRDKIPSNTSSVSSTDIERSYSPNLTDTLFQRIPGVTL 91


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