BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00038140
         (269 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_061979180.1 MULTISPECIES: integrase [Bradyrhizobium]               122   2e-31
SCB50362.1 Phage integrase family protein [Rhizobium multihospit...   113   4e-28
WP_034462703.1 integrase [Afipia sp. P52-10] ETR79462.1 integras...   105   4e-25
OCX26010.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]         102   5e-24
ABE65096.1 phage integrase (plasmid) [Nitrobacter hamburgensis X14]   102   6e-24
BAR63251.1 integrase/recombinase protein (plasmid) [Bradyrhizobi...   101   6e-24
WP_044414607.1 MULTISPECIES: integrase [Bradyrhizobiaceae] KIZ39...   102   6e-24
WP_024584968.1 integrase [Bradyrhizobium sp. OHSU_III]                102   6e-24
WP_015822435.1 integrase [Methylobacterium extorquens] CAX24244....   102   8e-24
WP_019200229.1 MULTISPECIES: integrase [Bradyrhizobiaceae]            101   1e-23
SDF01826.1 Site-specific recombinase XerD [Bradyrhizobium sp. R5]     101   1e-23
OCX25925.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]         100   2e-23
WP_043855073.1 integrase [Bradyrhizobium elkanii] KIU52644.1 int...   100   2e-23
EKS32932.1 hypothetical protein HMPREF9695_04947 [Afipia broomea...    98   8e-23
WP_002719015.1 hypothetical protein [Afipia felis] EKS26839.1 hy...    99   8e-23
WP_057193706.1 integrase [Bosea sp. Root483D1] KRE11657.1 integr...    99   1e-22
WP_036045106.1 integrase [Bradyrhizobium yuanmingense]                 99   1e-22
WP_024584213.1 integrase [Bradyrhizobium sp. OHSU_III]                 99   2e-22
WP_012564771.1 integrase [Oligotropha carboxidovorans] ACI94747....    98   2e-22
KPH77134.1 integrase, partial [Bosea vaviloviae]                       94   3e-22

>WP_061979180.1 MULTISPECIES: integrase [Bradyrhizobium]
          Length = 389

 Score =  122 bits (305), Expect = 2e-31
 Identities = 62/88 (70%), Positives = 62/88 (70%)
 Frame = +1

Query: 1   EGLLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXX 180
           EGLLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPT                     
Sbjct: 124 EGLLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTVRSAVRLAVRASPRPRRRKSR 183

Query: 181 XXXXXDILDRLLATCQTDRLADTRDLAI 264
                DILDRLLATCQTDRLADTRDLAI
Sbjct: 184 RAVTRDILDRLLATCQTDRLADTRDLAI 211


>SCB50362.1 Phage integrase family protein [Rhizobium multihospitium]
          Length = 389

 Score =  113 bits (283), Expect = 4e-28
 Identities = 56/88 (63%), Positives = 59/88 (67%)
 Frame = +1

Query: 1   EGLLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXX 180
           EGLLRTDGPHAP+TV+RRLASWSTLHRWKGMEGPFGAPT                     
Sbjct: 124 EGLLRTDGPHAPNTVKRRLASWSTLHRWKGMEGPFGAPTVRAAVRLAVRATPRPRRRKSK 183

Query: 181 XXXXXDILDRLLATCQTDRLADTRDLAI 264
                DILDRLL TC TDRL DTRD+AI
Sbjct: 184 RAVTRDILDRLLMTCSTDRLVDTRDIAI 211


>WP_034462703.1 integrase [Afipia sp. P52-10] ETR79462.1 integrase [Afipia sp.
           P52-10]
          Length = 389

 Score =  105 bits (262), Expect = 4e-25
 Identities = 52/88 (59%), Positives = 57/88 (64%)
 Frame = +1

Query: 1   EGLLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXX 180
           EGLLR+ GPHAPSTV+RRLASW TLHRWKG+EGPFG+P                      
Sbjct: 124 EGLLRSAGPHAPSTVKRRLASWGTLHRWKGIEGPFGSPAVRSAVRLAVRASPRPRRRKSK 183

Query: 181 XXXXXDILDRLLATCQTDRLADTRDLAI 264
                D+LDRL ATC TDRLADTRDLAI
Sbjct: 184 RAVTRDVLDRLAATCATDRLADTRDLAI 211


>OCX26010.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]
          Length = 376

 Score =  102 bits (254), Expect = 5e-24
 Identities = 50/86 (58%), Positives = 56/86 (65%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRTDGPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTDGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DRL DTRDLAI
Sbjct: 187 MTRDVLDRLLATCRSDRLVDTRDLAI 212


>ABE65096.1 phage integrase (plasmid) [Nitrobacter hamburgensis X14]
          Length = 422

 Score =  102 bits (255), Expect = 6e-24
 Identities = 50/86 (58%), Positives = 57/86 (66%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRTDGPHAPSTV+RRLA+W TLHRWKG EGPF +P+                       
Sbjct: 127 LLRTDGPHAPSTVKRRLANWGTLHRWKGQEGPFHSPSLRTALRLAVRASSRPRQRKSMRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DRLADTRDLAI
Sbjct: 187 VTRDVLDRLLATCRSDRLADTRDLAI 212


>BAR63251.1 integrase/recombinase protein (plasmid) [Bradyrhizobium
           diazoefficiens]
          Length = 335

 Score =  101 bits (252), Expect = 6e-24
 Identities = 49/86 (56%), Positives = 56/86 (65%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           +LR+DGPHAPSTV+RRLASW TLHRWKG EGPF +P+                       
Sbjct: 72  MLRSDGPHAPSTVKRRLASWGTLHRWKGQEGPFASPSLRSALRLAVRASTRPRQRKSKRA 131

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC +DRLADTRDLAI
Sbjct: 132 VTRDVLDRLLATCASDRLADTRDLAI 157


>WP_044414607.1 MULTISPECIES: integrase [Bradyrhizobiaceae] KIZ39782.1 integrase
           [Rhodopseudomonas palustris] KQW18148.1 integrase
           [Afipia sp. Root123D2]
          Length = 390

 Score =  102 bits (254), Expect = 6e-24
 Identities = 50/86 (58%), Positives = 56/86 (65%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRTDGPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTDGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DRL DTRDLAI
Sbjct: 187 VTRDVLDRLLATCRSDRLVDTRDLAI 212


>WP_024584968.1 integrase [Bradyrhizobium sp. OHSU_III]
          Length = 390

 Score =  102 bits (254), Expect = 6e-24
 Identities = 50/86 (58%), Positives = 56/86 (65%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRTDGPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTDGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DRL DTRDLAI
Sbjct: 187 MTRDVLDRLLATCRSDRLVDTRDLAI 212


>WP_015822435.1 integrase [Methylobacterium extorquens] CAX24244.1
           integrase/recombinase protein [Methylobacterium
           extorquens DM4]
          Length = 390

 Score =  102 bits (253), Expect = 8e-24
 Identities = 50/86 (58%), Positives = 56/86 (65%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRT+GPHAPSTV+RRLASW TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTEGPHAPSTVKRRLASWGTLHRWKGQEGPFHAPSLRTALRLAVRASVRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DRL DTRDLAI
Sbjct: 187 VTRDVLDRLLATCRSDRLVDTRDLAI 212


>WP_019200229.1 MULTISPECIES: integrase [Bradyrhizobiaceae]
          Length = 389

 Score =  101 bits (252), Expect = 1e-23
 Identities = 50/88 (56%), Positives = 57/88 (64%)
 Frame = +1

Query: 1   EGLLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXX 180
           +GLLR++GPHAP+TV+RRLASW TLHRWKGMEG FG+P                      
Sbjct: 124 QGLLRSEGPHAPNTVKRRLASWGTLHRWKGMEGSFGSPGVRSAVRLSVRASPRPRRRKSK 183

Query: 181 XXXXXDILDRLLATCQTDRLADTRDLAI 264
                DILD+L ATC TDRLADTRDLAI
Sbjct: 184 RAVTRDILDKLAATCATDRLADTRDLAI 211


>SDF01826.1 Site-specific recombinase XerD [Bradyrhizobium sp. R5]
          Length = 409

 Score =  101 bits (252), Expect = 1e-23
 Identities = 49/86 (56%), Positives = 58/86 (67%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           +LR+DGPHAPSTV+RRLA+W+TLHRWKG+EGPF AP                        
Sbjct: 127 ILRSDGPHAPSTVKRRLANWATLHRWKGLEGPFHAPGLRAAIRLAVRASGRPRRRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DRLADTRDLAI
Sbjct: 187 ITRDVLDRLLATCRSDRLADTRDLAI 212


>OCX25925.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]
          Length = 390

 Score =  100 bits (250), Expect = 2e-23
 Identities = 49/86 (56%), Positives = 56/86 (65%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRTDGPHAPSTV+RR+A+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTDGPHAPSTVKRRMANWGTLHRWKGEEGPFRAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DRL DTRDLAI
Sbjct: 187 VTRDVLDRLLATCRSDRLVDTRDLAI 212


>WP_043855073.1 integrase [Bradyrhizobium elkanii] KIU52644.1 integrase
           [Bradyrhizobium elkanii]
          Length = 390

 Score =  100 bits (250), Expect = 2e-23
 Identities = 49/86 (56%), Positives = 56/86 (65%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRT+GPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTEGPHAPSTVKRRLANWGTLHRWKGQEGPFQAPSLRTAVRLAVRASTRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DRL DTRDLAI
Sbjct: 187 VTRDVLDRLLATCRSDRLVDTRDLAI 212


>EKS32932.1 hypothetical protein HMPREF9695_04947 [Afipia broomeae ATCC 49717]
          Length = 308

 Score = 98.2 bits (243), Expect = 8e-23
 Identities = 49/88 (55%), Positives = 55/88 (62%)
 Frame = +1

Query: 1   EGLLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXX 180
           EGLLRT+GPHAP+TVRRRLASW TLHRWKG++ P  AP+                     
Sbjct: 43  EGLLRTEGPHAPNTVRRRLASWGTLHRWKGIDSPLSAPSLRSAVRLAVRASPRPRRRKSK 102

Query: 181 XXXXXDILDRLLATCQTDRLADTRDLAI 264
                D LD+L ATC TDRLADTRDLAI
Sbjct: 103 RSVTRDGLDKLAATCATDRLADTRDLAI 130


>WP_002719015.1 hypothetical protein [Afipia felis] EKS26839.1 hypothetical protein
           HMPREF9697_03955 [Afipia felis ATCC 53690]
          Length = 393

 Score = 99.4 bits (246), Expect = 8e-23
 Identities = 49/86 (56%), Positives = 55/86 (63%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRT+GPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTEGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC +DRL DTRDLAI
Sbjct: 187 VTRDVLDRLLATCCSDRLVDTRDLAI 212


>WP_057193706.1 integrase [Bosea sp. Root483D1] KRE11657.1 integrase [Bosea sp.
           Root483D1]
          Length = 388

 Score = 99.0 bits (245), Expect = 1e-22
 Identities = 48/85 (56%), Positives = 54/85 (63%)
 Frame = +1

Query: 10  LRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXXX 189
           LR++GPHAPSTV+RRLA W+TLHRWKG+E P G P                         
Sbjct: 126 LRSEGPHAPSTVKRRLAHWATLHRWKGLESPLGTPAIRTSMRLAVRASAKPRRRKSKRAV 185

Query: 190 XXDILDRLLATCQTDRLADTRDLAI 264
             DILDRL+ATCQTDRLADTRDLAI
Sbjct: 186 TRDILDRLIATCQTDRLADTRDLAI 210


>WP_036045106.1 integrase [Bradyrhizobium yuanmingense]
          Length = 390

 Score = 99.0 bits (245), Expect = 1e-22
 Identities = 48/86 (55%), Positives = 55/86 (63%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           +LR+DGPHAPSTV+RRLASW TLHRWKG EGPF +P+                       
Sbjct: 127 MLRSDGPHAPSTVKRRLASWGTLHRWKGQEGPFASPSLRSALQLAVRASTRPRRRKSSRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC + RLADTRDLAI
Sbjct: 187 VTRDVLDRLLATCASGRLADTRDLAI 212


>WP_024584213.1 integrase [Bradyrhizobium sp. OHSU_III]
          Length = 390

 Score = 98.6 bits (244), Expect = 2e-22
 Identities = 49/86 (56%), Positives = 56/86 (65%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLR+ GPHAPSTV+RRLASW TLHRWKG EGPF AP+                       
Sbjct: 127 LLRSAGPHAPSTVKRRLASWGTLHRWKGQEGPFHAPSLRTAVGLAVRANTRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              ++LDRLLATC++DRLADTRDLAI
Sbjct: 187 VTRNVLDRLLATCRSDRLADTRDLAI 212


>WP_012564771.1 integrase [Oligotropha carboxidovorans] ACI94747.1 phage integrase
           [Oligotropha carboxidovorans OM5] AEI04734.1 phage
           integrase (plasmid) [Oligotropha carboxidovorans OM4]
           AEI08363.1 phage integrase (plasmid) [Oligotropha
           carboxidovorans OM5]
          Length = 390

 Score = 98.2 bits (243), Expect = 2e-22
 Identities = 48/86 (55%), Positives = 55/86 (63%)
 Frame = +1

Query: 7   LLRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXX 186
           LLRT GPHAPSTV+RRLA+W TLHRWKG EGPF AP+                       
Sbjct: 127 LLRTIGPHAPSTVKRRLANWGTLHRWKGQEGPFHAPSLRAALRLAVRASVRPRQRKSKRA 186

Query: 187 XXXDILDRLLATCQTDRLADTRDLAI 264
              D+LDRLLATC++DR+ DTRDLAI
Sbjct: 187 VTRDVLDRLLATCRSDRIVDTRDLAI 212


>KPH77134.1 integrase, partial [Bosea vaviloviae]
          Length = 198

 Score = 94.4 bits (233), Expect = 3e-22
 Identities = 46/85 (54%), Positives = 53/85 (62%)
 Frame = +1

Query: 10  LRTDGPHAPSTVRRRLASWSTLHRWKGMEGPFGAPTXXXXXXXXXXXXXXXXXXXXXXXX 189
           LR+DGPHA STV+RRLA W+TLHRWKG+E P G P                         
Sbjct: 113 LRSDGPHASSTVKRRLAHWATLHRWKGLESPLGTPAIRTSVRLAVRASARPRRRKSKRAV 172

Query: 190 XXDILDRLLATCQTDRLADTRDLAI 264
             DILDRL+ATCQ++RLADTRDLAI
Sbjct: 173 TRDILDRLIATCQSERLADTRDLAI 197