BLASTX nr result
ID: Glycyrrhiza28_contig00038094
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00038094
(267 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KTT92375.1 replication protein C, partial [Staphylococcus sciuri] 143 4e-41
WP_051443753.1 replication protein C [Afipia sp. P52-10] ETR7945... 116 3e-29
WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ... 117 4e-29
WP_006023642.1 MULTISPECIES: hypothetical protein [Afipia] EKS32... 116 5e-29
WP_048758169.1 replication protein C [Afipia felis] 115 1e-28
CEG10456.1 replication initiation protein RepC [Afipia felis] 115 1e-28
WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium] 114 2e-28
SCB50338.1 replication initiation protein RepC [Rhizobium multih... 112 8e-28
WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III] 112 2e-27
WP_041358589.1 replication protein C [Methylobacterium extorquens] 112 2e-27
CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4] 112 2e-27
WP_013913430.1 replication protein C [Oligotropha carboxidovoran... 111 3e-27
ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5] 111 5e-27
WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobia... 110 6e-27
WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobi... 108 3e-26
EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis A... 108 3e-26
SHF79796.1 Replication protein C C-terminal region, partial [Dev... 100 2e-24
WP_068184787.1 hypothetical protein [Rhizobiales bacterium CCH3-A5] 96 9e-24
ODT74398.1 replication initiation protein RepC [Pelagibacterium ... 100 7e-23
WP_035087735.1 MULTISPECIES: replication initiation protein RepC... 100 9e-23
>KTT92375.1 replication protein C, partial [Staphylococcus sciuri]
Length = 226
Score = 143 bits (360), Expect = 4e-41
Identities = 71/75 (94%), Positives = 72/75 (96%)
Frame = +1
Query: 7 VAMTSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRAS 186
V T+TLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRAS
Sbjct: 152 VIATATLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRAS 211
Query: 187 AGQFSIWPMLMALTT 231
AGQFSIWPMLMAL T
Sbjct: 212 AGQFSIWPMLMALAT 226
>WP_051443753.1 replication protein C [Afipia sp. P52-10] ETR79455.1 replication
protein C [Afipia sp. P52-10]
Length = 403
Score = 116 bits (291), Expect = 3e-29
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = +1
Query: 7 VAMTSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRAS 186
V T+ ++RPLLGVSPSAWE+ C MG G AS TLA ILQ+G AI+NPGGYLRTL RRAS
Sbjct: 307 VTDTAAIVRPLLGVSPSAWEETCVAMGPGLASVTLALILQRGSAIRNPGGYLRTLARRAS 366
Query: 187 AGQFSIWPMLMALTTSHLRRQD 252
AGQFS+WPMLMAL + ++ +
Sbjct: 367 AGQFSVWPMLMALGATQRQKSE 388
>WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ABE65103.1
replication protein C (plasmid) [Nitrobacter
hamburgensis X14]
Length = 541
Score = 117 bits (294), Expect = 4e-29
Identities = 53/81 (65%), Positives = 67/81 (82%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++ +RP+LG+SPSAWE+ACT MG+GQAS LAAILQ+G AIK+PGGYLR L RRA+AG+
Sbjct: 448 TASAVRPMLGISPSAWEEACTAMGDGQASVVLAAILQRGAAIKSPGGYLRVLARRAAAGE 507
Query: 196 FSIWPMLMALTTSHLRRQDKD 258
FS+WPMLMAL +D+D
Sbjct: 508 FSVWPMLMALRRQGRAARDRD 528
>WP_006023642.1 MULTISPECIES: hypothetical protein [Afipia] EKS32924.1 hypothetical
protein HMPREF9695_04939 [Afipia broomeae ATCC 49717]
Length = 410
Score = 116 bits (290), Expect = 5e-29
Identities = 54/73 (73%), Positives = 62/73 (84%)
Frame = +1
Query: 7 VAMTSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRAS 186
V + ++RPLLGVSPSAWE+AC MG+G AS TLA ILQ+G+ IKNPGGYLRTL RRA+
Sbjct: 313 VVDAAVIVRPLLGVSPSAWEEACAAMGQGPASVTLALILQRGNGIKNPGGYLRTLARRAA 372
Query: 187 AGQFSIWPMLMAL 225
AGQFSIWPMLMAL
Sbjct: 373 AGQFSIWPMLMAL 385
>WP_048758169.1 replication protein C [Afipia felis]
Length = 410
Score = 115 bits (287), Expect = 1e-28
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++ +RP+LG+S SAWE+ACT MG+GQAS LAAILQ+G AIKNPGGYLR L RRA+AG+
Sbjct: 319 TASNVRPILGISSSAWEEACTAMGDGQASVVLAAILQRGAAIKNPGGYLRNLARRAAAGK 378
Query: 196 FSIWPMLMALTTSHLRRQDKD 258
FS+WPMLMAL D+D
Sbjct: 379 FSVWPMLMALRRQGCADNDRD 399
>CEG10456.1 replication initiation protein RepC [Afipia felis]
Length = 412
Score = 115 bits (287), Expect = 1e-28
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++ +RP+LG+S SAWE+ACT MG+GQAS LAAILQ+G AIKNPGGYLR L RRA+AG+
Sbjct: 321 TASNVRPILGISSSAWEEACTAMGDGQASVVLAAILQRGAAIKNPGGYLRNLARRAAAGK 380
Query: 196 FSIWPMLMALTTSHLRRQDKD 258
FS+WPMLMAL D+D
Sbjct: 381 FSVWPMLMALRRQGCADNDRD 401
>WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium]
Length = 399
Score = 114 bits (286), Expect = 2e-28
Identities = 54/77 (70%), Positives = 67/77 (87%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T+ L+RPLLG+SPSAWE+A VMGE QAS +AAILQ+G AIKNPGGYLR LTRRA+AG+
Sbjct: 321 TAALVRPLLGISPSAWEEAGQVMGEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGE 380
Query: 196 FSIWPMLMALTTSHLRR 246
FSIWPML+AL+ + L++
Sbjct: 381 FSIWPMLLALSATRLKK 397
>SCB50338.1 replication initiation protein RepC [Rhizobium multihospitium]
Length = 394
Score = 112 bits (281), Expect = 8e-28
Identities = 53/81 (65%), Positives = 67/81 (82%)
Frame = +1
Query: 4 AVAMTSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRA 183
A+ T+ L+RPLLG+S SAWE+A +MGE QA+ +AAILQ+G AIKNPGGYLR LTRRA
Sbjct: 312 ALLTTAALVRPLLGISASAWEEAGQIMGEPQAAIIVAAILQRGVAIKNPGGYLRNLTRRA 371
Query: 184 SAGQFSIWPMLMALTTSHLRR 246
AGQFS+WPMLMAL+ + L++
Sbjct: 372 GAGQFSVWPMLMALSAARLKK 392
>WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III]
Length = 412
Score = 112 bits (279), Expect = 2e-27
Identities = 54/83 (65%), Positives = 68/83 (81%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++ +RP+LG+SPSAWE+A MG+GQAS L+AILQ+G+AIKNPGGYLR L RRA+AG+
Sbjct: 321 TASTVRPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGK 380
Query: 196 FSIWPMLMALTTSHLRRQDKDAR 264
FS+WPMLMA LRRQ + AR
Sbjct: 381 FSVWPMLMA-----LRRQGQAAR 398
>WP_041358589.1 replication protein C [Methylobacterium extorquens]
Length = 412
Score = 112 bits (279), Expect = 2e-27
Identities = 51/81 (62%), Positives = 67/81 (82%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++++RP+LG+SPSAWE+A MG+GQAS L+AILQ+G+AIK+PGGYLR L RRA+AG+
Sbjct: 319 TASIVRPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKSPGGYLRILARRAAAGK 378
Query: 196 FSIWPMLMALTTSHLRRQDKD 258
FS+WPMLMAL +DKD
Sbjct: 379 FSVWPMLMALRRQGPGARDKD 399
>CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4]
Length = 414
Score = 112 bits (279), Expect = 2e-27
Identities = 51/81 (62%), Positives = 67/81 (82%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++++RP+LG+SPSAWE+A MG+GQAS L+AILQ+G+AIK+PGGYLR L RRA+AG+
Sbjct: 321 TASIVRPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKSPGGYLRILARRAAAGK 380
Query: 196 FSIWPMLMALTTSHLRRQDKD 258
FS+WPMLMAL +DKD
Sbjct: 381 FSVWPMLMALRRQGPGARDKD 401
>WP_013913430.1 replication protein C [Oligotropha carboxidovorans] AEI04578.1
replication protein C (plasmid) [Oligotropha
carboxidovorans OM4] AEI08207.1 replication protein C
(plasmid) [Oligotropha carboxidovorans OM5]
Length = 410
Score = 111 bits (278), Expect = 3e-27
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++ +RP+LG+SPSAWE+AC MG+GQAS LAAILQ+G AIK+PGGYLR L RRA+ G+
Sbjct: 319 TASTVRPMLGISPSAWEEACNAMGDGQASVVLAAILQRGAAIKSPGGYLRILARRATTGE 378
Query: 196 FSIWPMLMALTTSHLRRQDKDAR 264
FS+WPML+A LRRQ AR
Sbjct: 379 FSVWPMLLA-----LRRQGHAAR 396
>ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5]
Length = 484
Score = 111 bits (278), Expect = 5e-27
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++ +RP+LG+SPSAWE+AC MG+GQAS LAAILQ+G AIK+PGGYLR L RRA+ G+
Sbjct: 393 TASTVRPMLGISPSAWEEACNAMGDGQASVVLAAILQRGAAIKSPGGYLRILARRATTGE 452
Query: 196 FSIWPMLMALTTSHLRRQDKDAR 264
FS+WPML+A LRRQ AR
Sbjct: 453 FSVWPMLLA-----LRRQGHAAR 470
>WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobiaceae]
Length = 396
Score = 110 bits (275), Expect = 6e-27
Identities = 50/77 (64%), Positives = 65/77 (84%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T+ ++RP+LG+SPSAWE+A MGE QA+ ++AILQ+G AIKNPGGYLR LTRRA+AGQ
Sbjct: 317 TAAIVRPMLGISPSAWEEAGITMGETQAAIVVSAILQRGVAIKNPGGYLRNLTRRAAAGQ 376
Query: 196 FSIWPMLMALTTSHLRR 246
FS+WPMLMAL+ L++
Sbjct: 377 FSMWPMLMALSAGRLKK 393
>WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobiaceae] KIZ48201.1
replication protein C [Rhodopseudomonas palustris]
KQW18215.1 replication protein C [Afipia sp. Root123D2]
Length = 410
Score = 108 bits (271), Expect = 3e-26
Identities = 50/81 (61%), Positives = 65/81 (80%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++ +R +LG+SPSAWE+A MG+GQAS L+AILQ+G+AIKNPGGYLR L RRA+AG+
Sbjct: 319 TASTVRSMLGISPSAWEEARIAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGK 378
Query: 196 FSIWPMLMALTTSHLRRQDKD 258
FS+WPMLMAL +D+D
Sbjct: 379 FSVWPMLMALRRQGQAARDRD 399
>EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis ATCC 53690]
Length = 412
Score = 108 bits (271), Expect = 3e-26
Identities = 50/81 (61%), Positives = 65/81 (80%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T++ +R +LG+SPSAWE+A MG+GQAS L+AILQ+G+AIKNPGGYLR L RRA+AG+
Sbjct: 321 TASTVRSMLGISPSAWEEARIAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGK 380
Query: 196 FSIWPMLMALTTSHLRRQDKD 258
FS+WPMLMAL +D+D
Sbjct: 381 FSVWPMLMALRRQGQAARDRD 401
>SHF79796.1 Replication protein C C-terminal region, partial [Devosia limi DSM
17137]
Length = 184
Score = 99.8 bits (247), Expect = 2e-24
Identities = 48/75 (64%), Positives = 57/75 (76%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T+ L RP+LG+SPSAWEDA MGE QA+ TLAAI Q+ D IK+PGGYLR LT RA G+
Sbjct: 63 TTDLARPVLGISPSAWEDAKVAMGEQQAAITLAAIYQRTDQIKSPGGYLRNLTERAKEGK 122
Query: 196 FSIWPMLMALTTSHL 240
FS WPM+MAL + L
Sbjct: 123 FSTWPMIMALLRAKL 137
>WP_068184787.1 hypothetical protein [Rhizobiales bacterium CCH3-A5]
Length = 106
Score = 95.5 bits (236), Expect = 9e-24
Identities = 49/82 (59%), Positives = 63/82 (76%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T ++RP+LG+SPSAWE+A +VM E QAS +AAILQ+G+AI + GGYLR LTR+A A +
Sbjct: 26 TVAVVRPMLGISPSAWEEAISVMDEVQASIVVAAILQRGEAISSAGGYLRELTRKAQAAE 85
Query: 196 FSIWPMLMALTTSHLRRQDKDA 261
FS+ PMLMAL S RR+ K A
Sbjct: 86 FSLGPMLMALIGSR-RREKKRA 106
>ODT74398.1 replication initiation protein RepC [Pelagibacterium sp. SCN 64-44]
Length = 447
Score = 100 bits (248), Expect = 7e-23
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +1
Query: 7 VAMTSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRAS 186
+A T T RP++G+SPSAWEDA MGE QA+ TLAAI QKGD +K+PGGYLR LT RA
Sbjct: 324 LAATETA-RPVMGISPSAWEDARVAMGEQQAAITLAAIYQKGDEVKSPGGYLRYLTERAK 382
Query: 187 AGQFSIWPMLMALTTSHL 240
G+FS WPM+MAL + L
Sbjct: 383 EGKFSAWPMIMALVRAEL 400
>WP_035087735.1 MULTISPECIES: replication initiation protein RepC [Devosia]
KFL27560.1 replication initiation protein RepC [Devosia
riboflavina] KKB86160.1 replication initiation protein
RepC [Devosia limi DSM 17137]
Length = 447
Score = 99.8 bits (247), Expect = 9e-23
Identities = 48/75 (64%), Positives = 57/75 (76%)
Frame = +1
Query: 16 TSTLIRPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQ 195
T+ L RP+LG+SPSAWEDA MGE QA+ TLAAI Q+ D IK+PGGYLR LT RA G+
Sbjct: 326 TTDLARPVLGISPSAWEDAKVAMGEQQAAITLAAIYQRTDQIKSPGGYLRNLTERAKEGK 385
Query: 196 FSIWPMLMALTTSHL 240
FS WPM+MAL + L
Sbjct: 386 FSTWPMIMALLRAKL 400