BLASTX nr result
ID: Glycyrrhiza28_contig00037416
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00037416
(263 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium ... 89 1e-18
WP_061487277.1 conjugal transfer protein TraA [Acetobacter tropi... 55 7e-07
KXV23159.1 conjugal transfer protein TraA, partial [Gluconobacte... 55 1e-06
WP_034926734.1 Ti-type conjugative transfer relaxase TraA, parti... 55 1e-06
WP_010517890.1 Ti-type conjugative transfer relaxase TraA, parti... 55 1e-06
WP_039795421.1 Ti-type conjugative transfer relaxase TraA, parti... 55 1e-06
WP_061275589.1 Ti-type conjugative transfer relaxase TraA [Komag... 55 1e-06
WP_061275730.1 conjugal transfer protein TraA [Komagataeibacter ... 55 1e-06
WP_070324349.1 Ti-type conjugative transfer relaxase TraA [Aceto... 55 1e-06
WP_062106145.1 conjugal transfer protein TraA [Gluconobacter alb... 55 1e-06
WP_011251583.1 conjugal transfer protein TrbA [Gluconobacter oxy... 55 1e-06
WP_025439940.1 conjugal transfer protein TraA [Komagataeibacter ... 55 1e-06
WP_019087203.1 conjugal transfer protein TrbA [Komagataeibacter ... 55 1e-06
WP_070325423.1 Ti-type conjugative transfer relaxase TraA [Aceto... 55 1e-06
WP_061499138.1 conjugal transfer protein TraA [Acetobacter malor... 53 4e-06
WP_073140453.1 Ti-type conjugative transfer relaxase TraA [Roseo... 53 4e-06
WP_018308595.1 conjugal transfer protein TrbA [Acetobacter aceti] 53 5e-06
WP_019092373.1 Ti-type conjugative transfer relaxase TraA [Komag... 52 7e-06
WP_010517488.1 Ti-type conjugative transfer relaxase TraA [Komag... 52 7e-06
WP_010338126.1 conjugal transfer protein TrbA [Sphingobium yanoi... 52 7e-06
>WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium extorquens]
ACS44173.1 Conjugal transfer protein TraA (plasmid)
[Methylobacterium extorquens AM1]
Length = 964
Score = 88.6 bits (218), Expect = 1e-18
Identities = 54/87 (62%), Positives = 54/87 (62%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
RELATGRTGE LEAQAALVAAWDAERQAAPEKSRMILASTRVDV
Sbjct: 505 RELATGRTGEALARYVAAGRVQAQATRLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 564
Query: 83 XXXXXXXXXXXXXXXXLGVEAPVETER 3
LGVEAPVETER
Sbjct: 565 AELNRLARARMRAAGALGVEAPVETER 591
>WP_061487277.1 conjugal transfer protein TraA [Acetobacter tropicalis] KXV60733.1
conjugal transfer protein TraA [Acetobacter tropicalis]
Length = 1029
Score = 55.1 bits (131), Expect = 7e-07
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +V WDA RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHETLEEARAGVVVGWDAARQAAPEESQIMLAHRRVDV 564
>KXV23159.1 conjugal transfer protein TraA, partial [Gluconobacter oxydans]
Length = 633
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_034926734.1 Ti-type conjugative transfer relaxase TraA, partial
[Komagataeibacter rhaeticus] KDU95170.1 conjugal
transfer protein TraA, partial [Komagataeibacter
rhaeticus AF1]
Length = 669
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 370 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 429
>WP_010517890.1 Ti-type conjugative transfer relaxase TraA, partial
[Komagataeibacter oboediens]
Length = 681
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_039795421.1 Ti-type conjugative transfer relaxase TraA, partial
[Komagataeibacter europaeus]
Length = 795
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 370 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 429
>WP_061275589.1 Ti-type conjugative transfer relaxase TraA [Komagataeibacter
xylinus]
Length = 892
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 370 KELATGRTGEALGRYEAADLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 429
>WP_061275730.1 conjugal transfer protein TraA [Komagataeibacter xylinus]
Length = 1027
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAADLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_070324349.1 Ti-type conjugative transfer relaxase TraA [Acetobacter
pasteurianus] AOW48038.1 Ti-type conjugative transfer
relaxase TraA (plasmid) [Acetobacter pasteurianus subsp.
ascendens]
Length = 1028
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_062106145.1 conjugal transfer protein TraA [Gluconobacter albidus] KXV50285.1
conjugal transfer protein TraA [Gluconobacter albidus]
Length = 1028
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_011251583.1 conjugal transfer protein TrbA [Gluconobacter oxydans] AAW59777.1
conjugal transfer protein, TraA (plasmid) [Gluconobacter
oxydans 621H]
Length = 1028
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_025439940.1 conjugal transfer protein TraA [Komagataeibacter xylinus]
AHI27150.1 conjugal transfer protein TraA (plasmid)
[Komagataeibacter xylinus E25] AHI27266.1 conjugal
transfer protein TraA (plasmid) [Komagataeibacter
xylinus E25]
Length = 1028
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_019087203.1 conjugal transfer protein TrbA [Komagataeibacter europaeus]
Length = 1029
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_070325423.1 Ti-type conjugative transfer relaxase TraA [Acetobacter
pasteurianus] AOW50607.1 Ti-type conjugative transfer
relaxase TraA (plasmid) [Acetobacter pasteurianus subsp.
paradoxus]
Length = 1034
Score = 54.7 bits (130), Expect = 1e-06
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA WD RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWDEARQAAPEESQIMLAHRRVDV 564
>WP_061499138.1 conjugal transfer protein TraA [Acetobacter malorum] KXV70354.1
conjugal transfer protein TraA [Acetobacter malorum]
Length = 1026
Score = 53.1 bits (126), Expect = 4e-06
Identities = 28/60 (46%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA W+ RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAVGLVRGHDTLEEARAGVVAGWEEARQAAPEESQIMLAHRRVDV 564
>WP_073140453.1 Ti-type conjugative transfer relaxase TraA [Roseomonas rosea]
SHK46485.1 Ti-type conjugative transfer relaxase TraA
[Roseomonas rosea]
Length = 1123
Score = 53.1 bits (126), Expect = 4e-06
Identities = 34/86 (39%), Positives = 41/86 (47%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
RELATGRTG EA+AA+VA W AER+ +P +SR++LA TR DV
Sbjct: 514 RELATGRTGAALDRYEVAGMVRGHVTGDEARAAVVAGWAAERRESPHQSRIMLAHTRADV 573
Query: 83 XXXXXXXXXXXXXXXXLGVEAPVETE 6
LG E V TE
Sbjct: 574 AALNALARERLREAEELGPERAVATE 599
>WP_018308595.1 conjugal transfer protein TrbA [Acetobacter aceti]
Length = 1026
Score = 52.8 bits (125), Expect = 5e-06
Identities = 28/60 (46%), Positives = 36/60 (60%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +VA W+ RQAAPE+S+++LA RVDV
Sbjct: 505 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVAGWNQARQAAPEESQIMLAHRRVDV 564
>WP_019092373.1 Ti-type conjugative transfer relaxase TraA [Komagataeibacter
europaeus]
Length = 890
Score = 52.4 bits (124), Expect = 7e-06
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +V WD RQAAPE S+++LA RVDV
Sbjct: 368 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVVGWDEARQAAPEDSQIMLAHRRVDV 427
>WP_010517488.1 Ti-type conjugative transfer relaxase TraA [Komagataeibacter
oboediens]
Length = 892
Score = 52.4 bits (124), Expect = 7e-06
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
+ELATGRTGE EA+A +V WD RQAAPE S+++LA RVDV
Sbjct: 370 KELATGRTGEALGRYEAAGLVRGHDTLEEARAGVVVGWDEARQAAPEDSQIMLAHRRVDV 429
>WP_010338126.1 conjugal transfer protein TrbA [Sphingobium yanoikuyae]
Length = 984
Score = 52.4 bits (124), Expect = 7e-06
Identities = 31/87 (35%), Positives = 41/87 (47%)
Frame = -1
Query: 263 RELATGRTGEXXXXXXXXXXXXXXXXXLEAQAALVAAWDAERQAAPEKSRMILASTRVDV 84
R LATGRTGE +A++AL+ +WD +RQA P+ SR+IL T +V
Sbjct: 509 RHLATGRTGEAIGAYAEHNMVHAADTRDQARSALIESWDRDRQAKPDASRIILTHTNAEV 568
Query: 83 XXXXXXXXXXXXXXXXLGVEAPVETER 3
LG + VETER
Sbjct: 569 RDLNEAARDRMREAGELGPDIAVETER 595