BLASTX nr result

ID: Glycyrrhiza28_contig00037051 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00037051
         (361 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003606089.2 5'-3' exoribonuclease [Medicago truncatula] AES88...    79   7e-15
KYP68681.1 5'-3' exoribonuclease 3 [Cajanus cajan]                     67   1e-10
XP_004506263.1 PREDICTED: 5'-3' exoribonuclease 3-like [Cicer ar...    55   2e-06

>XP_003606089.2 5'-3' exoribonuclease [Medicago truncatula] AES88286.2 5'-3'
           exoribonuclease [Medicago truncatula]
          Length = 846

 Score = 79.3 bits (194), Expect = 7e-15
 Identities = 48/89 (53%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -1

Query: 361 TTQHGRSLSLNPPPEVIYKGAGVGWSSSGRGKHADNSSNMKRID-QMADETTSSLSPSHE 185
           T+  GRS S N PPE I+KGAGVGW  SGRGK        +RID +  +E  SS SP H+
Sbjct: 750 TSFGGRSFSRNAPPESIHKGAGVGW-GSGRGK-------SERIDHETINERMSSFSPFHK 801

Query: 184 QLEDGGGSYQHHQRRSQSETMPFGRGRGR 98
           Q  D GGSY  HQR      +PFGRGRGR
Sbjct: 802 QPNDHGGSYHQHQR----SHVPFGRGRGR 826


>KYP68681.1 5'-3' exoribonuclease 3 [Cajanus cajan]
          Length = 924

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 48/107 (44%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
 Frame = -1

Query: 361  TTQHGRSLSLNPPPEVIYKGAGVGWSSSGRGKHADNSSNMKRIDQMADETTSSLSPSHEQ 182
            T+QH +S S N PP +IYK AGVGW  SGRG         KRID MA+ETT  LSP HEQ
Sbjct: 770  TSQHAKSFSSNAPP-LIYKEAGVGWGGSGRG---------KRIDSMANETT-PLSPFHEQ 818

Query: 181  LEDGGGSYQ----------------HHQRRSQSETMPFGRGRGRLQP 89
             +D  GSYQ                 H R S+S   P   G  + QP
Sbjct: 819  HKD-AGSYQVTTTRDTRPQHLVDKFRHFRISESNHSPRHGGSSQFQP 864


>XP_004506263.1 PREDICTED: 5'-3' exoribonuclease 3-like [Cicer arietinum]
          Length = 854

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
 Frame = -1

Query: 361 TTQHGRSLSLNPPPEVIYKGAGVGWSSSGRGKHADNSSNMKRIDQMADETTSSLSPSHEQ 182
           T   GR L LN PPE I+KGA VGW   GRG      +  K  D++ +E  SS SP  +Q
Sbjct: 770 TNGRGRGLLLNAPPEFIHKGAAVGW-GLGRG------NPQKIDDEILNERMSSFSPFQKQ 822

Query: 181 LEDGG---GSYQHHQRRS 137
            +DGG   G +QH+   S
Sbjct: 823 HKDGGRGQGRFQHNSNTS 840


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