BLASTX nr result

ID: Glycyrrhiza28_contig00036731 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00036731
         (530 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU12488.1 hypothetical protein TSUD_230210 [Trifolium subterran...    69   9e-11

>GAU12488.1 hypothetical protein TSUD_230210 [Trifolium subterraneum]
          Length = 258

 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 57/164 (34%), Positives = 76/164 (46%), Gaps = 31/164 (18%)
 Frame = +1

Query: 118 MDRNVASPSIIIIACFLLVLYPLITSARTPFE-------YLTGFDTDHTTTNHD-SFPL- 270
           M  N+ASP+III  CFL++     ++ RTPF+        +   D DH   NHD SFP+ 
Sbjct: 1   MATNIASPNIII-TCFLIIFCTFSSAVRTPFDSSDINNVNVNDIDLDH--NNHDASFPMF 57

Query: 271 ---SADPNAIFLPSEK-----TEPET-----------NSKVETATESSEASNKKNPRRPF 393
                D N+IFLPSE      +EPET            SK++  T ++EA  ++    P 
Sbjct: 58  VKNPLDENSIFLPSENLPESDSEPETLIQYEPEETNHESKIDAPTTTTEAKKEEVKPLPL 117

Query: 394 TVXXXXXXXXXXXXXXXXXXXV--HRCHHHQQQPYRPW-NRHLP 516
           TV                      HRC +H Q PY+ W NRHLP
Sbjct: 118 TVFRVGPIDRSHIHRHPSFRHPVHHRC-YHAQHPYKLWNNRHLP 160


Top