BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00036690
         (279 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium ...   189   5e-54
WP_063987526.1 Ti-type conjugative transfer relaxase TraA [Methy...   143   7e-38
WP_066652255.1 conjugal transfer protein TraA, partial [Sphingom...   141   3e-37
WP_066212928.1 MULTISPECIES: conjugal transfer protein TraA [Sph...   141   5e-37
OHB40674.1 Ti-type conjugative transfer relaxase TraA [Phenyloba...   137   7e-36
ODT85536.1 Ti-type conjugative transfer relaxase TraA [Phenyloba...   137   7e-36
WP_061939930.1 MULTISPECIES: conjugal transfer protein TraA [Sph...   136   2e-35
AMK26693.1 conjugal transfer relaxase TraA (plasmid) [Sphingobiu...   136   2e-35
EQB30861.1 hypothetical protein M529_17585 [Sphingobium ummarien...   136   2e-35
WP_051184084.1 Ti-type conjugative transfer relaxase TraA, parti...   136   2e-35
WP_066544355.1 conjugal transfer protein TraA [Sphingomonas sp. ...   136   3e-35
WP_039574453.1 conjugal transfer protein TraA [Sphingopyxis frib...   136   3e-35
WP_021238842.1 conjugal transfer protein TrbA [Sphingobium quisq...   136   3e-35
EQA97499.1 hypothetical protein L288_20915, partial [Sphingobium...   131   4e-35
WP_061940317.1 conjugal transfer protein TraA, partial [Sphingob...   135   4e-35
WP_062017436.1 MULTISPECIES: conjugal transfer protein TraA [Sph...   135   4e-35
ODU19551.1 Ti-type conjugative transfer relaxase TraA [Sphingomo...   135   4e-35
WP_048575168.1 conjugal transfer protein TraA [Sphingomonas sp. ...   135   4e-35
WP_046408097.1 conjugal transfer protein TraA [Sphingomonas sp. ...   135   5e-35
WP_041394263.1 conjugal transfer protein TraA [Sphingomonas taxi...   135   5e-35

>WP_012753487.1 conjugal transfer protein TrbA [Methylobacterium extorquens]
           ACS44173.1 Conjugal transfer protein TraA (plasmid)
           [Methylobacterium extorquens AM1]
          Length = 964

 Score =  189 bits (480), Expect = 5e-54
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +2

Query: 2   PGDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAA 181
           PGDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAA
Sbjct: 598 PGDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAA 657

Query: 182 TVHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           TVHKAQGVTVDRIHLLASPLMDRHSAYVGLTR
Sbjct: 658 TVHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 689


>WP_063987526.1 Ti-type conjugative transfer relaxase TraA [Methylobacterium
           populi] BAU94019.1 conjugal transfer relaxase TraA
           (plasmid) [Methylobacterium populi] OAH27958.1 conjugal
           transfer protein TraA [Methylobacterium populi]
          Length = 985

 Score =  143 bits (361), Expect = 7e-38
 Identities = 67/93 (72%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   PGDRLMFLRNERSLGVKNGSLGWVERVESGG-MSVRLDGPEGRVIGFELKDYAHVEHGYA 178
           PGDR+MFLRNER +GVKNG+LG +ER+E G  ++VRLDG E   + F+LKDYAH++HGYA
Sbjct: 598 PGDRVMFLRNERGMGVKNGTLGTLERIEGGSSLTVRLDGAESMRVSFDLKDYAHIDHGYA 657

Query: 179 ATVHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           ATVHKAQGVTVDR H+LA+P MDRH+AYVGLTR
Sbjct: 658 ATVHKAQGVTVDRAHVLATPHMDRHAAYVGLTR 690


>WP_066652255.1 conjugal transfer protein TraA, partial [Sphingomonas sp. CCH10-B3]
          Length = 679

 Score =  141 bits (355), Expect = 3e-37
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDRLMFLRNERSLGVKNG+LG +ERV   GM+VRLDG  GR + F+ KDYAHV+HGYAAT
Sbjct: 308 GDRLMFLRNERSLGVKNGTLGTIERVTPEGMTVRLDG--GRQVAFDAKDYAHVDHGYAAT 365

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
            HKAQGVTVDR H+LA+P MDRHSAYVG++R
Sbjct: 366 FHKAQGVTVDRAHVLATPGMDRHSAYVGMSR 396


>WP_066212928.1 MULTISPECIES: conjugal transfer protein TraA [Sphingomonadales]
          Length = 975

 Score =  141 bits (355), Expect = 5e-37
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDRLMFLRNERSLGVKNG+LG +ERV   GM+VRLDG  GR + F+ KDYAHV+HGYAAT
Sbjct: 604 GDRLMFLRNERSLGVKNGTLGTIERVTPEGMTVRLDG--GRQVAFDAKDYAHVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
            HKAQGVTVDR H+LA+P MDRHSAYVG++R
Sbjct: 662 FHKAQGVTVDRAHVLATPGMDRHSAYVGMSR 692


>OHB40674.1 Ti-type conjugative transfer relaxase TraA [Phenylobacterium sp.
           RIFCSPHIGHO2_01_FULL_70_10]
          Length = 827

 Score =  137 bits (346), Expect = 7e-36
 Identities = 65/91 (71%), Positives = 76/91 (83%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFLRNERSLGVKNGSLG VERVE   +SVRLDGP  R + F   +YAHV+HGYAAT
Sbjct: 597 GDRIMFLRNERSLGVKNGSLGVVERVEGSTISVRLDGPGARQVAFSTHEYAHVDHGYAAT 656

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVDR HLLA+  +DRH+ YVG+TR
Sbjct: 657 IHKSQGVTVDRTHLLATSGLDRHATYVGMTR 687


>ODT85536.1 Ti-type conjugative transfer relaxase TraA [Phenylobacterium sp.
           SCN 70-31]
          Length = 827

 Score =  137 bits (346), Expect = 7e-36
 Identities = 65/91 (71%), Positives = 76/91 (83%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFLRNERSLGVKNGSLG VERVE   +SVRLDGP  R + F   +YAHV+HGYAAT
Sbjct: 597 GDRIMFLRNERSLGVKNGSLGVVERVEGSTISVRLDGPGARQVAFSTHEYAHVDHGYAAT 656

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVDR HLLA+  +DRH+ YVG+TR
Sbjct: 657 IHKSQGVTVDRTHLLATSGLDRHATYVGMTR 687


>WP_061939930.1 MULTISPECIES: conjugal transfer protein TraA [Sphingomonadaceae]
           KXU29868.1 conjugal transfer protein TraA [Sphingobium
           sp. AM] KYC29991.1 conjugal transfer protein TraA
           [Sphingobium sp. 22B] OAP29598.1 Ti-type conjugative
           transfer relaxase TraA [Sphingomonas paucimobilis]
           BAV66853.1 conjugal transfer protein TraA (plasmid)
           [Sphingobium cloacae]
          Length = 971

 Score =  136 bits (343), Expect = 2e-35
 Identities = 66/91 (72%), Positives = 78/91 (85%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFLRNERSLGVKNG+LG +ER+E G M+VRLDG  G    F+LKDYAHV+HGYAAT
Sbjct: 604 GDRIMFLRNERSLGVKNGTLGTLERIEGGRMAVRLDG--GGHAAFDLKDYAHVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVDR H+LA+P MDRH AYV L+R
Sbjct: 662 IHKSQGVTVDRAHVLATPGMDRHGAYVALSR 692


>AMK26693.1 conjugal transfer relaxase TraA (plasmid) [Sphingobium sp. TKS]
          Length = 699

 Score =  136 bits (342), Expect = 2e-35
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFL+NER LGVKNG+LG VERV    M+VRLD  +GR + F+LKDYAHV+HGYAAT
Sbjct: 603 GDRIMFLKNERGLGVKNGTLGKVERVTPEHMAVRLD--DGRSVAFDLKDYAHVDHGYAAT 660

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVDR H+LA+P MDRHSAYVGL+R
Sbjct: 661 IHKSQGVTVDRAHVLATPGMDRHSAYVGLSR 691


>EQB30861.1 hypothetical protein M529_17585 [Sphingobium ummariense RL-3]
          Length = 751

 Score =  136 bits (342), Expect = 2e-35
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFL+NER LGVKNG+LG VERV    M+VRLD  +GR + F+LKDYAHV+HGYAAT
Sbjct: 325 GDRIMFLKNERGLGVKNGTLGKVERVTPEHMAVRLD--DGRSVAFDLKDYAHVDHGYAAT 382

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVDR H+LA+P MDRHSAYVGL+R
Sbjct: 383 IHKSQGVTVDRAHVLATPGMDRHSAYVGLSR 413


>WP_051184084.1 Ti-type conjugative transfer relaxase TraA, partial [Sphingobium
           ummariense]
          Length = 769

 Score =  136 bits (342), Expect = 2e-35
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFL+NER LGVKNG+LG VERV    M+VRLD  +GR + F+LKDYAHV+HGYAAT
Sbjct: 343 GDRIMFLKNERGLGVKNGTLGKVERVTPEHMAVRLD--DGRSVAFDLKDYAHVDHGYAAT 400

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVDR H+LA+P MDRHSAYVGL+R
Sbjct: 401 IHKSQGVTVDRAHVLATPGMDRHSAYVGLSR 431


>WP_066544355.1 conjugal transfer protein TraA [Sphingomonas sp. CCH21-G11]
          Length = 971

 Score =  136 bits (342), Expect = 3e-35
 Identities = 65/91 (71%), Positives = 78/91 (85%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFLRNER +GVKNG+L  +ERV S GM+VRLD  +GR + F+ KDYAHV+HGYAAT
Sbjct: 604 GDRIMFLRNERGMGVKNGTLATIERVSSEGMAVRLD--DGREVAFDTKDYAHVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
            HK+QGVTVDR H+LA+P MDRHSAYVGL+R
Sbjct: 662 FHKSQGVTVDRAHVLATPGMDRHSAYVGLSR 692


>WP_039574453.1 conjugal transfer protein TraA [Sphingopyxis fribergensis]
           AJA08920.1 conjugal transfer protein TraA [Sphingopyxis
           fribergensis]
          Length = 978

 Score =  136 bits (342), Expect = 3e-35
 Identities = 67/92 (72%), Positives = 79/92 (85%)
 Frame = +2

Query: 2   PGDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAA 181
           PGDR+MFLRNERSL VKNG+LG VE+V + GM+VR DG  GR   F+LKDYAHV+HGY+A
Sbjct: 608 PGDRIMFLRNERSLEVKNGTLGVVEQVSTRGMTVRTDG--GRGAAFDLKDYAHVDHGYSA 665

Query: 182 TVHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           T HKAQG+TVDR H+LA+P MDRHSAYVGL+R
Sbjct: 666 TFHKAQGMTVDRTHVLATPGMDRHSAYVGLSR 697


>WP_021238842.1 conjugal transfer protein TrbA [Sphingobium quisquiliarum]
           EQB04839.1 conjugal transfer protein TrbA [Sphingobium
           quisquiliarum P25]
          Length = 1029

 Score =  136 bits (342), Expect = 3e-35
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFL+NER LGVKNG+LG VERV    M+VRLD  +GR + F+LKDYAHV+HGYAAT
Sbjct: 603 GDRIMFLKNERGLGVKNGTLGKVERVTPEHMAVRLD--DGRSVAFDLKDYAHVDHGYAAT 660

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVDR H+LA+P MDRHSAYVGL+R
Sbjct: 661 IHKSQGVTVDRAHVLATPGMDRHSAYVGLSR 691


>EQA97499.1 hypothetical protein L288_20915, partial [Sphingobium quisquiliarum
           P25]
          Length = 361

 Score =  131 bits (330), Expect = 4e-35
 Identities = 63/91 (69%), Positives = 78/91 (85%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFL+NER LGVKNG+LG VERV    M+VRLD  +GR + F+LKDYAHV+HGYAAT
Sbjct: 4   GDRIMFLKNERGLGVKNGTLGKVERVSPDSMAVRLD--DGRQVAFDLKDYAHVDHGYAAT 61

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVD+ H+LA+P MDRH+AYV L+R
Sbjct: 62  IHKSQGVTVDQGHVLATPGMDRHAAYVALSR 92


>WP_061940317.1 conjugal transfer protein TraA, partial [Sphingobium sp. AM]
           KXU29583.1 conjugal transfer protein TraA, partial
           [Sphingobium sp. AM]
          Length = 962

 Score =  135 bits (341), Expect = 4e-35
 Identities = 68/91 (74%), Positives = 78/91 (85%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFLRNERSLGVKNG+LG +ERVE G M+VRLDG  G    F+LKDYA V+HGYAAT
Sbjct: 604 GDRIMFLRNERSLGVKNGTLGTLERVEGGHMAVRLDG--GGRAAFDLKDYAAVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
            HK+QGVTVDR HLLA+P MDRHSAYVG++R
Sbjct: 662 FHKSQGVTVDRAHLLATPGMDRHSAYVGMSR 692


>WP_062017436.1 MULTISPECIES: conjugal transfer protein TraA [Sphingomonadaceae]
           KYC29875.1 conjugal transfer protein TraA [Sphingobium
           sp. 22B] OAP29475.1 Ti-type conjugative transfer
           relaxase TraA [Sphingomonas paucimobilis]
          Length = 970

 Score =  135 bits (341), Expect = 4e-35
 Identities = 68/91 (74%), Positives = 78/91 (85%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFLRNERSLGVKNG+LG +ERVE G M+VRLDG  G    F+LKDYA V+HGYAAT
Sbjct: 604 GDRIMFLRNERSLGVKNGTLGTLERVEGGHMAVRLDG--GGRAAFDLKDYAAVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
            HK+QGVTVDR HLLA+P MDRHSAYVG++R
Sbjct: 662 FHKSQGVTVDRAHLLATPGMDRHSAYVGMSR 692


>ODU19551.1 Ti-type conjugative transfer relaxase TraA [Sphingomonas sp. SCN
           67-18]
          Length = 971

 Score =  135 bits (341), Expect = 4e-35
 Identities = 65/91 (71%), Positives = 78/91 (85%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDRLMFLRNER LGVKNG+LG +ERV   GM+VRLD  +GR + F+ KDYAHV+HGYAAT
Sbjct: 604 GDRLMFLRNERLLGVKNGTLGTIERVSPEGMAVRLD--DGRGVAFDTKDYAHVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVD  H+LA+P MDRHSAYVG++R
Sbjct: 662 IHKSQGVTVDHAHVLATPGMDRHSAYVGMSR 692


>WP_048575168.1 conjugal transfer protein TraA [Sphingomonas sp. MEA3-1]
          Length = 979

 Score =  135 bits (341), Expect = 4e-35
 Identities = 63/91 (69%), Positives = 80/91 (87%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MF RN+R LGVKNGSLG +ERV + GM+V++D  +GR + F+LKDYAHV+HGYAAT
Sbjct: 604 GDRIMFFRNDRGLGVKNGSLGTLERVSAEGMAVKMD--DGRKVAFDLKDYAHVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
           +HK+QGVTVD+ H+LA+P MDRHSAYVGL+R
Sbjct: 662 IHKSQGVTVDQAHVLATPGMDRHSAYVGLSR 692


>WP_046408097.1 conjugal transfer protein TraA [Sphingomonas sp. Ag1] KKI20354.1
           conjugal transfer protein TraA [Sphingomonas sp. Ag1]
          Length = 972

 Score =  135 bits (340), Expect = 5e-35
 Identities = 67/91 (73%), Positives = 78/91 (85%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFLRNERSLGVKNG+LG +ER+E G M+VRLDG  G    F+LKDYA V+HGYAAT
Sbjct: 604 GDRIMFLRNERSLGVKNGTLGTLERIEGGHMAVRLDG--GGRAAFDLKDYAAVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
            HK+QGVTVDR HLLA+P MDRHSAYVG++R
Sbjct: 662 FHKSQGVTVDRAHLLATPGMDRHSAYVGMSR 692


>WP_041394263.1 conjugal transfer protein TraA [Sphingomonas taxi] AIT08481.1
           conjugal transfer protein TraA (plasmid) [Sphingomonas
           taxi]
          Length = 980

 Score =  135 bits (340), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 78/91 (85%)
 Frame = +2

Query: 5   GDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYAHVEHGYAAT 184
           GDR+MFLRNER +GVKNG+L  +ERV S GM+VRLD  +GR + F+ KDYAHV+HGYAAT
Sbjct: 604 GDRIMFLRNERGMGVKNGTLATIERVSSEGMAVRLD--DGRGVAFDTKDYAHVDHGYAAT 661

Query: 185 VHKAQGVTVDRIHLLASPLMDRHSAYVGLTR 277
            HK+QGVTVDR H+LA+P MDRHSAYVG++R
Sbjct: 662 FHKSQGVTVDRAHILATPGMDRHSAYVGMSR 692