BLASTX nr result

ID: Glycyrrhiza28_contig00036404 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00036404
         (264 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_072874616.1 ISL3 family transposase [Alicyclobacillus sp. USB...    56   4e-07
WP_006473027.1 ISL3 family transposase [Ochrobactrum intermedium...    55   1e-06
WP_074729791.1 ISL3 family transposase [Paenibacillus naphthalen...    52   6e-06

>WP_072874616.1 ISL3 family transposase [Alicyclobacillus sp. USBA-503] SHL10681.1
           Transposase [Alicyclobacillus sp. USBA-503] SHK64379.1
           Transposase [Alicyclobacillus sp. USBA-503]
          Length = 445

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 24/86 (27%), Positives = 50/86 (58%)
 Frame = +3

Query: 3   PKKLKYKWSDRRLLHMSPEKRAKLMPMKRMMFEATLANDQPLREVWETKERFYAIWDTTD 182
           PK+ +    DR +L    ++R +L P + ++ E  + N + L   +  KE F+ IWD  +
Sbjct: 248 PKERRGLMHDRFILL---KRRTELKPNEELILEVWIKNFEQLGTAYHLKESFFKIWDAKN 304

Query: 183 RKEAVRRFDEWKRSLPPAAEPHYRPV 260
           +++A++ +DEW+  +PP+ E  ++ +
Sbjct: 305 KEQAMKAYDEWRNQIPPSLEYAFKDI 330


>WP_006473027.1 ISL3 family transposase [Ochrobactrum intermedium] ELT46849.1
           transposase, IS204/IS1001/IS1096/IS1165 family protein
           [Ochrobactrum intermedium M86]
          Length = 447

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 23/54 (42%), Positives = 31/54 (57%)
 Frame = +3

Query: 57  EKRAKLMPMKRMMFEATLANDQPLREVWETKERFYAIWDTTDRKEAVRRFDEWK 218
           + R +L P  + + +  L+N   L+  WE KE FY IWD T R  A R F+EWK
Sbjct: 265 KSRHRLSPRAQFVLDGWLSNSPTLKRAWEAKEAFYDIWDCTSRAAAERAFEEWK 318


>WP_074729791.1 ISL3 family transposase [Paenibacillus naphthalenovorans]
           SDJ62368.1 Transposase [Paenibacillus naphthalenovorans]
           SDX89366.1 Transposase [Paenibacillus sp. PDC88]
          Length = 436

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 21/58 (36%), Positives = 37/58 (63%)
 Frame = +3

Query: 57  EKRAKLMPMKRMMFEATLANDQPLREVWETKERFYAIWDTTDRKEAVRRFDEWKRSLP 230
           ++R  L PM++++ ++   N   L++ +E KE FY IW+ +D KEA  R+  W+ S+P
Sbjct: 264 KRRKDLTPMEQIILDSWTLNFPRLKQAYELKEAFYEIWEASDAKEAQERYTAWQASIP 321


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