BLASTX nr result
ID: Glycyrrhiza28_contig00035997
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00035997
(336 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_061979430.1 MULTISPECIES: DNA polymerase [Bradyrhizobium] 228 1e-67
WP_018431440.1 error-prone DNA polymerase [Hoeflea sp. 108] 169 1e-46
WP_051963928.1 DNA polymerase-like protein, partial [Rhizobium s... 155 3e-46
WP_051964333.1 DNA polymerase-like protein, partial [Rhizobium s... 154 8e-46
KYB45737.1 hypothetical protein AB664_34400, partial [Ochrobactr... 152 1e-45
WP_045682797.1 DNA polymerase [Martelella endophytica] AJY46868.... 166 1e-45
WP_035027846.1 DNA polymerase [Aquamicrobium defluvii] EXL04864.... 165 3e-45
GAJ97129.1 hypothetical protein RRH01S_34_00050 [Rhizobium rhizo... 152 5e-45
WP_042477777.1 DNA polymerase-like protein [Agrobacterium rhizog... 152 1e-44
WP_015918101.1 MULTISPECIES: DNA polymerase-like protein [Rhizob... 152 1e-44
WP_049731485.1 DNA polymerase-like protein [Rhizobium ecuadorense] 152 2e-44
KSV78137.1 hypothetical protein N182_20875 [Sinorhizobium sp. GL2] 149 3e-44
SCB48407.1 OB-fold nucleic acid binding domain-containing protei... 155 3e-44
KUO51846.1 hypothetical protein APF82_10600, partial [Sphingomon... 149 3e-44
WP_065696042.1 DNA polymerase-like protein [Agrobacterium sp. B1... 150 1e-43
WP_011665434.1 nucleic acid binding, OB-fold, tRNA/helicase-type... 147 2e-43
WP_052025798.1 DNA-binding protein, partial [Agrobacterium tumef... 146 2e-43
EMS94834.1 DNA polymerase-like protein [Agrobacterium tumefacien... 145 3e-43
WP_058323834.1 DNA polymerase [Sinorhizobium sp. GL28] KSV88527.... 159 3e-43
WP_065377385.1 error-prone DNA polymerase [Ensifer adhaerens] 158 9e-43
>WP_061979430.1 MULTISPECIES: DNA polymerase [Bradyrhizobium]
Length = 1083
Score = 228 bits (582), Expect = 1e-67
Identities = 111/111 (100%), Positives = 111/111 (100%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL
Sbjct: 967 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 1026
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPREPANLAHRPGHFSDLTV 3
SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPREPANLAHRPGHFSDLTV
Sbjct: 1027 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPREPANLAHRPGHFSDLTV 1077
>WP_018431440.1 error-prone DNA polymerase [Hoeflea sp. 108]
Length = 1086
Score = 169 bits (428), Expect = 1e-46
Identities = 82/114 (71%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMFMTIEDET VAN+VIWEK+F++FRRTVLGAGMIGI+G++QREGEVVH+VA L DL
Sbjct: 967 KGVMFMTIEDETTVANIVIWEKVFKQFRRTVLGAGMIGIKGRVQREGEVVHIVAHQLVDL 1026
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR---EPANLAHRPGHFSDLTV 3
SAELAS+G+RDT FP PHGRGDEFH GSPAPD R + +LAH GH + + V
Sbjct: 1027 SAELASVGSRDTRFPFPHGRGDEFHHGSPAPDSRGLQKAWDLAHGYGHTNQIQV 1080
>WP_051963928.1 DNA polymerase-like protein, partial [Rhizobium sp. OK494]
Length = 157
Score = 155 bits (391), Expect = 3e-46
Identities = 71/94 (75%), Positives = 81/94 (86%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FEK+RR VLGAGM+G+ G+IQREGEVVH+VA L DL
Sbjct: 35 KGVMFITIEDETGIANLVVWLKTFEKYRRVVLGAGMVGVYGRIQREGEVVHLVAHRLTDL 94
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
S ELAS+G RD FPLPHGRGDEFH GSP PDPR
Sbjct: 95 SGELASVGDRDAAFPLPHGRGDEFHHGSPVPDPR 128
>WP_051964333.1 DNA polymerase-like protein, partial [Rhizobium sp. OK494]
Length = 157
Score = 154 bits (388), Expect = 8e-46
Identities = 71/94 (75%), Positives = 81/94 (86%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FEK+RR VLGAGM+G+ G+IQREGEVVH+VA L DL
Sbjct: 35 KGVMFITIEDETGIANLVVWLKTFEKYRRVVLGAGMVGVYGRIQREGEVVHLVAHRLTDL 94
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
S ELAS+G RD FPLPHGRGDEFH GSP PDPR
Sbjct: 95 SGELASVGDRDAVFPLPHGRGDEFHHGSPVPDPR 128
>KYB45737.1 hypothetical protein AB664_34400, partial [Ochrobactrum anthropi]
Length = 120
Score = 152 bits (384), Expect = 1e-45
Identities = 73/114 (64%), Positives = 89/114 (78%), Gaps = 3/114 (2%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDET VAN+VIW K FEKF R +LGA M+G+RG++QREGEVVH+V + L DL
Sbjct: 1 KGVMFVTIEDETAVANLVIWTKTFEKFPRIILGANMMGVRGRVQREGEVVHIVVQHLTDL 60
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR---EPANLAHRPGHFSDLTV 3
S ELASIG+R+ FPLPHGRGDEFH GSP PDPR +P N+ H ++T+
Sbjct: 61 SHELASIGSRECRFPLPHGRGDEFHHGSPTPDPRGLPKPRNMPDPYLHLDEITM 114
>WP_045682797.1 DNA polymerase [Martelella endophytica] AJY46868.1 DNA polymerase
[Martelella endophytica]
Length = 1086
Score = 166 bits (421), Expect = 1e-45
Identities = 74/114 (64%), Positives = 98/114 (85%), Gaps = 3/114 (2%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+T+EDETGV+N+V+W K+FEK+RRTVLG+GM+G++G++QREGEVVH+VAR+L DL
Sbjct: 967 KGVMFITLEDETGVSNLVVWAKVFEKYRRTVLGSGMLGVKGRVQREGEVVHIVARELSDL 1026
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR---EPANLAHRPGHFSDLTV 3
S+ELAS+G+RDT FPLPHGRGDEFH G+P PDPR +P ++ GH ++ V
Sbjct: 1027 SSELASVGSRDTVFPLPHGRGDEFHHGTPGPDPRGMPKPRDMLDPYGHIDEIKV 1080
>WP_035027846.1 DNA polymerase [Aquamicrobium defluvii] EXL04864.1 DNA polymerase
[Aquamicrobium defluvii] EZQ14581.1 DNA polymerase
[Pseudomonas bauzanensis]
Length = 1086
Score = 165 bits (418), Expect = 3e-45
Identities = 79/114 (69%), Positives = 91/114 (79%), Gaps = 3/114 (2%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMFMTIEDETGVAN+VIW+K+FE+ RR VLG+GMIG+ GQ+QREGEV+H+VA L DL
Sbjct: 967 KGVMFMTIEDETGVANIVIWQKVFERHRRIVLGSGMIGVSGQVQREGEVIHIVAHRLTDL 1026
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR---EPANLAHRPGHFSDLTV 3
SA+LASIGARD FPLPHGRGD FH GSPAPDPR P NL H ++ V
Sbjct: 1027 SADLASIGARDAAFPLPHGRGDNFHHGSPAPDPRALPRPRNLVDPYDHTGEIRV 1080
>GAJ97129.1 hypothetical protein RRH01S_34_00050 [Rhizobium rhizogenes NBRC
13257]
Length = 182
Score = 152 bits (385), Expect = 5e-45
Identities = 71/94 (75%), Positives = 81/94 (86%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FEK+RR VLGAGMIG+ G+IQREG+VVH+VA L DL
Sbjct: 60 KGVMFITIEDETGIANLVVWLKTFEKYRRVVLGAGMIGVYGRIQREGDVVHLVAHRLTDL 119
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
SAELAS+G RD FPLPHGRGDEFH GSP DPR
Sbjct: 120 SAELASVGDRDAAFPLPHGRGDEFHHGSPVADPR 153
>WP_042477777.1 DNA polymerase-like protein [Agrobacterium rhizogenes]
Length = 210
Score = 152 bits (385), Expect = 1e-44
Identities = 71/94 (75%), Positives = 81/94 (86%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FEK+RR VLGAGMIG+ G+IQREG+VVH+VA L DL
Sbjct: 88 KGVMFITIEDETGIANLVVWLKTFEKYRRVVLGAGMIGVYGRIQREGDVVHLVAHRLTDL 147
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
SAELAS+G RD FPLPHGRGDEFH GSP DPR
Sbjct: 148 SAELASVGDRDAAFPLPHGRGDEFHHGSPVADPR 181
>WP_015918101.1 MULTISPECIES: DNA polymerase-like protein [Rhizobium/Agrobacterium
group] ACM30846.1 DNA polymerase-related protein
[Agrobacterium radiobacter K84] KEA04545.1 DNA
polymerase-like protein [Agrobacterium rhizogenes]
OCJ00001.1 DNA polymerase-like protein [Agrobacterium
sp. 13-626] OCJ20480.1 DNA polymerase-like protein
[Agrobacterium sp. B131/95]
Length = 210
Score = 152 bits (385), Expect = 1e-44
Identities = 71/94 (75%), Positives = 81/94 (86%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FEK+RR VLGAGMIG+ G+IQREG+VVH+VA L DL
Sbjct: 88 KGVMFITIEDETGIANLVVWLKTFEKYRRVVLGAGMIGVYGRIQREGDVVHLVAHRLTDL 147
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
SAELAS+G RD FPLPHGRGDEFH GSP DPR
Sbjct: 148 SAELASVGDRDAAFPLPHGRGDEFHHGSPVADPR 181
>WP_049731485.1 DNA polymerase-like protein [Rhizobium ecuadorense]
Length = 213
Score = 152 bits (383), Expect = 2e-44
Identities = 68/94 (72%), Positives = 82/94 (87%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGV+F+TIEDETG+AN+V+W K+FEK+RR VLGAGM+G+ G+IQREG+VVH+VA L DL
Sbjct: 91 KGVLFVTIEDETGIANLVVWAKVFEKYRRVVLGAGMLGVYGRIQREGDVVHLVAHRLADL 150
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
S ELAS+G RD FPLPHGRGDEFH G+P PDPR
Sbjct: 151 SGELASVGERDGTFPLPHGRGDEFHHGAPRPDPR 184
>KSV78137.1 hypothetical protein N182_20875 [Sinorhizobium sp. GL2]
Length = 133
Score = 149 bits (376), Expect = 3e-44
Identities = 68/94 (72%), Positives = 79/94 (84%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FE +RR VLGAGM+G+ G+IQREGEVVH+VA L DL
Sbjct: 11 KGVMFITIEDETGIANLVVWAKTFENYRRVVLGAGMLGVYGRIQREGEVVHLVAHRLTDL 70
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
S LA +G RD FPLPHGRGDEFH G+PAPDPR
Sbjct: 71 SDALARVGERDVSFPLPHGRGDEFHHGAPAPDPR 104
>SCB48407.1 OB-fold nucleic acid binding domain-containing protein [Rhizobium
miluonense]
Length = 335
Score = 155 bits (392), Expect = 3e-44
Identities = 72/94 (76%), Positives = 83/94 (88%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FE++RR VLGAGMIG+ G+IQREG+VVH+VA L DL
Sbjct: 213 KGVMFITIEDETGIANLVVWLKTFEQYRRVVLGAGMIGVYGRIQREGDVVHLVAHRLIDL 272
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
SAELAS+G RD FPLPHGRGDEFH GSPAPDPR
Sbjct: 273 SAELASVGDRDAVFPLPHGRGDEFHHGSPAPDPR 306
>KUO51846.1 hypothetical protein APF82_10600, partial [Sphingomonadales
bacterium BRH_c42]
Length = 140
Score = 149 bits (376), Expect = 3e-44
Identities = 67/94 (71%), Positives = 81/94 (86%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+T+EDE+G+AN+V+W ++FEK RR +L AGM +RG+IQREGEVVH+VA+ L DL
Sbjct: 17 KGVMFITLEDESGIANLVVWPQVFEKNRRIILSAGMFAVRGRIQREGEVVHLVAQRLTDL 76
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
SAELAS+G RD FPLPHGRGDEFH GSP PDPR
Sbjct: 77 SAELASVGDRDAAFPLPHGRGDEFHHGSPTPDPR 110
>WP_065696042.1 DNA polymerase-like protein [Agrobacterium sp. B133/95] OCJ24204.1
DNA polymerase-like protein [Agrobacterium sp. B133/95]
Length = 210
Score = 150 bits (378), Expect = 1e-43
Identities = 70/94 (74%), Positives = 80/94 (85%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FEK+RR VLGAGMIG+ G+IQREG+VVH+VA DL
Sbjct: 88 KGVMFITIEDETGIANLVVWLKTFEKYRRVVLGAGMIGVYGRIQREGDVVHLVAHRPTDL 147
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
SAELAS+G RD FPLPHGRGDEFH GSP DPR
Sbjct: 148 SAELASVGDRDAAFPLPHGRGDEFHHGSPVADPR 181
>WP_011665434.1 nucleic acid binding, OB-fold, tRNA/helicase-type [Rhodopseudomonas
palustris] ABJ07974.1 nucleic acid binding, OB-fold,
tRNA/helicase-type [Rhodopseudomonas palustris BisA53]
Length = 128
Score = 147 bits (370), Expect = 2e-43
Identities = 65/94 (69%), Positives = 82/94 (87%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGV+F+TIEDETG+AN+V+W ++FE+ RR +LGAGMIG++G+IQREGEV+H+VAR L DL
Sbjct: 6 KGVLFVTIEDETGIANLVVWPQLFERQRRVILGAGMIGVQGRIQREGEVMHLVARQLSDL 65
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
S ELA +G RD FP+PHGRGDEFH GSP+ DPR
Sbjct: 66 SPELAGVGDRDVAFPVPHGRGDEFHHGSPSLDPR 99
>WP_052025798.1 DNA-binding protein, partial [Agrobacterium tumefaciens]
Length = 113
Score = 146 bits (368), Expect = 2e-43
Identities = 69/107 (64%), Positives = 85/107 (79%), Gaps = 3/107 (2%)
Frame = -2
Query: 314 IEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDLSAELASI 135
+EDET VAN+V+W K+FEK+RR VLGAGMIG++G++QREGEVVH+VA L DLSAELAS+
Sbjct: 1 LEDETAVANLVVWTKVFEKYRRIVLGAGMIGVKGRVQREGEVVHIVAHHLTDLSAELASV 60
Query: 134 GARDTGFPLPHGRGDEFHRGSPAPDPR---EPANLAHRPGHFSDLTV 3
G+RD GFPLPHGRGDEFH GSPA D R +P N+ H ++ V
Sbjct: 61 GSRDAGFPLPHGRGDEFHHGSPALDTRGLPKPRNMPDPYLHLDEIRV 107
>EMS94834.1 DNA polymerase-like protein [Agrobacterium tumefaciens str. Cherry
2E-2-2]
Length = 113
Score = 145 bits (367), Expect = 3e-43
Identities = 69/107 (64%), Positives = 85/107 (79%), Gaps = 3/107 (2%)
Frame = -2
Query: 314 IEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDLSAELASI 135
+EDET VAN+V+W K+FEK+RR VLGAGMIG++G++QREGEVVH+VA L DLSAELAS+
Sbjct: 1 MEDETAVANLVVWTKVFEKYRRIVLGAGMIGVKGRVQREGEVVHIVAHHLTDLSAELASV 60
Query: 134 GARDTGFPLPHGRGDEFHRGSPAPDPR---EPANLAHRPGHFSDLTV 3
G+RD GFPLPHGRGDEFH GSPA D R +P N+ H ++ V
Sbjct: 61 GSRDAGFPLPHGRGDEFHHGSPALDTRGLPKPRNMPDPYLHLDEIRV 107
>WP_058323834.1 DNA polymerase [Sinorhizobium sp. GL28] KSV88527.1 DNA polymerase
[Sinorhizobium sp. GL28]
Length = 1088
Score = 159 bits (403), Expect = 3e-43
Identities = 73/94 (77%), Positives = 84/94 (89%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FEK+RR VLGAGM+G+ G+IQREGEVVH+VA L DL
Sbjct: 966 KGVMFITIEDETGIANLVVWAKTFEKYRRVVLGAGMLGVYGRIQREGEVVHLVAHRLTDL 1025
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
SAELAS+G RD GFP+PHGRGDEFH GSPAPDPR
Sbjct: 1026 SAELASVGDRDAGFPVPHGRGDEFHHGSPAPDPR 1059
>WP_065377385.1 error-prone DNA polymerase [Ensifer adhaerens]
Length = 1088
Score = 158 bits (400), Expect = 9e-43
Identities = 73/94 (77%), Positives = 83/94 (88%)
Frame = -2
Query: 335 KGVMFMTIEDETGVANVVIWEKIFEKFRRTVLGAGMIGIRGQIQREGEVVHVVARDLFDL 156
KGVMF+TIEDETG+AN+V+W K FEK+RR VL AGM+G+ G+IQREGEVVH+VA L DL
Sbjct: 966 KGVMFITIEDETGIANLVVWAKTFEKYRRVVLSAGMLGVYGRIQREGEVVHLVAHRLTDL 1025
Query: 155 SAELASIGARDTGFPLPHGRGDEFHRGSPAPDPR 54
SAELAS+G RD GFPLPHGRGDEFH GSPAPDPR
Sbjct: 1026 SAELASVGDRDAGFPLPHGRGDEFHHGSPAPDPR 1059