BLASTX nr result
ID: Glycyrrhiza28_contig00035341
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00035341
(244 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_061979852.1 MULTISPECIES: P-type DNA transfer ATPase VirB11 [... 71 9e-13
SCB50236.1 type IV secretion system protein VirB11 [Rhizobium mu... 70 3e-12
WP_040427722.1 P-type DNA transfer ATPase VirB11 [Afipia birgiae] 68 1e-11
WP_043854862.1 P-type DNA transfer ATPase VirB11, partial [Brady... 62 8e-10
WP_044407311.1 MULTISPECIES: P-type DNA transfer ATPase VirB11 [... 61 4e-09
WP_043854998.1 P-type DNA transfer ATPase VirB11 [Bradyrhizobium... 61 4e-09
ABE65021.1 type II secretion system protein E (plasmid) [Nitroba... 60 9e-09
WP_012564826.1 P-type DNA transfer ATPase VirB11 [Oligotropha ca... 60 9e-09
SDR63787.1 type IV secretion system protein VirB11 [Rhizobiales ... 60 9e-09
OCX32505.1 P-type DNA transfer ATPase VirB11 [Bradyrhizobium sp.... 60 9e-09
WP_041359641.1 P-type DNA transfer ATPase VirB11 [Nitrobacter ha... 60 9e-09
WP_061979853.1 MULTISPECIES: conjugal transfer protein [Bradyrhi... 60 9e-09
WP_006023725.1 MULTISPECIES: P-type DNA transfer ATPase VirB11 [... 59 2e-08
WP_038357821.1 P-type DNA transfer ATPase VirB11 [Bosea sp. UNC4... 58 4e-08
ETR79436.1 type VI secretion protein [Afipia sp. P52-10] 58 6e-08
WP_034462686.1 P-type DNA transfer ATPase VirB11 [Afipia sp. P52... 58 6e-08
BAV52652.1 type II secretion system protein E (plasmid) [Mesorhi... 57 1e-07
SCB50232.1 type IV secretion system protein VirB10 [Rhizobium mu... 57 1e-07
WP_069694316.1 P-type DNA transfer ATPase VirB11 [Bosea vavilovi... 54 2e-06
BAV52651.1 conjugation TrbI-like protein (plasmid) [Mesorhizobiu... 53 4e-06
>WP_061979852.1 MULTISPECIES: P-type DNA transfer ATPase VirB11 [Bradyrhizobium]
Length = 351
Score = 71.2 bits (173), Expect = 9e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE
Sbjct: 35 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 67
Score = 60.8 bits (146), Expect = 5e-09
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 VNAPARSLTVFIDRALEPVRPWLEDDQVV 2
+NAPARSLTVFIDRALEPVRPWLEDDQVV
Sbjct: 1 MNAPARSLTVFIDRALEPVRPWLEDDQVV 29
>SCB50236.1 type IV secretion system protein VirB11 [Rhizobium multihospitium]
Length = 352
Score = 69.7 bits (169), Expect = 3e-12
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQAAMERHVV+QLTEQAIRHLAE
Sbjct: 35 GPGEVWVERFGQAAMERHVVEQLTEQAIRHLAE 67
Score = 58.2 bits (139), Expect = 4e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -1
Query: 88 VNAPARSLTVFIDRALEPVRPWLEDDQVV 2
+NAPARSLTVFIDRALEPVRPWL DDQVV
Sbjct: 1 MNAPARSLTVFIDRALEPVRPWLVDDQVV 29
>WP_040427722.1 P-type DNA transfer ATPase VirB11 [Afipia birgiae]
Length = 351
Score = 68.2 bits (165), Expect = 1e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQAAMERH V+QLTEQAIRHLAE
Sbjct: 35 GPGEVWVERFGQAAMERHAVEQLTEQAIRHLAE 67
Score = 57.0 bits (136), Expect = 1e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 88 VNAPARSLTVFIDRALEPVRPWLEDDQVV 2
+NAPARSLTVFIDRALEPVR WLEDDQ+V
Sbjct: 1 MNAPARSLTVFIDRALEPVRRWLEDDQIV 29
>WP_043854862.1 P-type DNA transfer ATPase VirB11, partial [Bradyrhizobium elkanii]
KIU54412.1 type VI secretion protein, partial
[Bradyrhizobium elkanii]
Length = 242
Score = 62.4 bits (150), Expect = 8e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQAAMERH V LTE AIRHLAE
Sbjct: 35 GPGEVWVERFGQAAMERHEVPSLTEHAIRHLAE 67
>WP_044407311.1 MULTISPECIES: P-type DNA transfer ATPase VirB11 [Bradyrhizobiaceae]
KIZ46689.1 type VI secretion protein [Rhodopseudomonas
palustris] KQW18073.1 type VI secretion protein [Afipia
sp. Root123D2]
Length = 352
Score = 61.2 bits (147), Expect = 4e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQ+AMERH V LTE AIRHLAE
Sbjct: 35 GPGEVWVERFGQSAMERHEVPSLTEHAIRHLAE 67
Score = 55.8 bits (133), Expect = 3e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 88 VNAPARSLTVFIDRALEPVRPWLEDDQVV 2
+NA ARSLTVFIDRAL+PVRPWLEDDQVV
Sbjct: 1 MNALARSLTVFIDRALDPVRPWLEDDQVV 29
>WP_043854998.1 P-type DNA transfer ATPase VirB11 [Bradyrhizobium elkanii]
KIU53308.1 type VI secretion protein [Bradyrhizobium
elkanii] OJV00523.1 P-type DNA transfer ATPase VirB11
[Nitrobacter sp. 62-23]
Length = 352
Score = 61.2 bits (147), Expect = 4e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQ+AMERH V LTE AIRHLAE
Sbjct: 35 GPGEVWVERFGQSAMERHEVPSLTEHAIRHLAE 67
Score = 54.3 bits (129), Expect = 1e-06
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = -1
Query: 88 VNAPARSLTVFIDRALEPVRPWLEDDQVV 2
+NA ARSLTVFIDRAL+PVRPWLEDD+VV
Sbjct: 1 MNALARSLTVFIDRALDPVRPWLEDDRVV 29
>ABE65021.1 type II secretion system protein E (plasmid) [Nitrobacter
hamburgensis X14]
Length = 349
Score = 60.1 bits (144), Expect = 9e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQ+AMERH V LTE A+RHLAE
Sbjct: 32 GPGEVWVERFGQSAMERHDVPHLTEHALRHLAE 64
Score = 52.0 bits (123), Expect = 7e-06
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = -1
Query: 76 ARSLTVFIDRALEPVRPWLEDDQVV 2
ARSLTVFIDRALEP+RPWL+DDQVV
Sbjct: 2 ARSLTVFIDRALEPIRPWLKDDQVV 26
>WP_012564826.1 P-type DNA transfer ATPase VirB11 [Oligotropha carboxidovorans]
ACI94802.1 P-type DNA transfer ATPase VirB11
[Oligotropha carboxidovorans OM5] AEI04679.1 type IV
secretion protein VirB11 (plasmid) [Oligotropha
carboxidovorans OM4] AEI08308.1 type IV secretion
protein VirB11 (plasmid) [Oligotropha carboxidovorans
OM5]
Length = 352
Score = 60.1 bits (144), Expect = 9e-09
Identities = 28/33 (84%), Positives = 28/33 (84%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GP EVWVERFGQAAMERH V LTE AIRHLAE
Sbjct: 35 GPAEVWVERFGQAAMERHEVPSLTEHAIRHLAE 67
>SDR63787.1 type IV secretion system protein VirB11 [Rhizobiales bacterium
GAS113]
Length = 352
Score = 60.1 bits (144), Expect = 9e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQ+AMERH V LTE AIRHLAE
Sbjct: 35 GPGEVWVERFGQSAMERHDVPALTETAIRHLAE 67
>OCX32505.1 P-type DNA transfer ATPase VirB11 [Bradyrhizobium sp. UASWS1016]
Length = 352
Score = 60.1 bits (144), Expect = 9e-09
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFG++AMERH V +LTE AIRHLAE
Sbjct: 35 GPGEVWVERFGRSAMERHEVPRLTEHAIRHLAE 67
Score = 56.2 bits (134), Expect = 2e-07
Identities = 22/29 (75%), Positives = 29/29 (100%)
Frame = -1
Query: 88 VNAPARSLTVFIDRALEPVRPWLEDDQVV 2
+NAPARS+TVF+DRAL+P+RPWL+DDQ+V
Sbjct: 1 MNAPARSVTVFVDRALDPIRPWLDDDQIV 29
>WP_041359641.1 P-type DNA transfer ATPase VirB11 [Nitrobacter hamburgensis]
Length = 352
Score = 60.1 bits (144), Expect = 9e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQ+AMERH V LTE A+RHLAE
Sbjct: 35 GPGEVWVERFGQSAMERHDVPHLTEHALRHLAE 67
Score = 55.1 bits (131), Expect = 5e-07
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = -1
Query: 88 VNAPARSLTVFIDRALEPVRPWLEDDQVV 2
+NA ARSLTVFIDRALEP+RPWL+DDQVV
Sbjct: 1 MNALARSLTVFIDRALEPIRPWLKDDQVV 29
>WP_061979853.1 MULTISPECIES: conjugal transfer protein [Bradyrhizobium]
Length = 449
Score = 60.1 bits (144), Expect = 9e-09
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -3
Query: 152 RRADFSAFYPDPVKEALQEIRRERAGQKPD 63
R DFSAFYPDPVKEALQEIRRERAGQKPD
Sbjct: 417 RDLDFSAFYPDPVKEALQEIRRERAGQKPD 446
>WP_006023725.1 MULTISPECIES: P-type DNA transfer ATPase VirB11 [Afipia] EKS33005.1
P-type DNA transfer ATPase VirB11 [Afipia broomeae ATCC
49717] CEG10520.1 Type IV secretion system protein
VirB11 [Afipia felis]
Length = 345
Score = 59.3 bits (142), Expect = 2e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVWVERFGQ+AMERH V L+E AIRHLAE
Sbjct: 35 GPGEVWVERFGQSAMERHEVPALSEHAIRHLAE 67
Score = 53.5 bits (127), Expect = 2e-06
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 76 ARSLTVFIDRALEPVRPWLEDDQVV 2
ARSLTVFIDRALEP+RPWLEDDQVV
Sbjct: 5 ARSLTVFIDRALEPIRPWLEDDQVV 29
>WP_038357821.1 P-type DNA transfer ATPase VirB11 [Bosea sp. UNC402CLCol]
Length = 352
Score = 58.2 bits (139), Expect = 4e-08
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPG VWVERFGQ+ MERH + +LTEQAIRHLAE
Sbjct: 35 GPGMVWVERFGQSEMERHELPELTEQAIRHLAE 67
>ETR79436.1 type VI secretion protein [Afipia sp. P52-10]
Length = 342
Score = 57.8 bits (138), Expect = 6e-08
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVW+ERFGQ+AMER+ V LTE AIRHLAE
Sbjct: 32 GPGEVWIERFGQSAMERYDVPALTEHAIRHLAE 64
Score = 53.5 bits (127), Expect = 2e-06
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 76 ARSLTVFIDRALEPVRPWLEDDQVV 2
ARSLTVFIDRALEP+RPWLEDDQVV
Sbjct: 2 ARSLTVFIDRALEPIRPWLEDDQVV 26
>WP_034462686.1 P-type DNA transfer ATPase VirB11 [Afipia sp. P52-10]
Length = 345
Score = 57.8 bits (138), Expect = 6e-08
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGEVW+ERFGQ+AMER+ V LTE AIRHLAE
Sbjct: 35 GPGEVWIERFGQSAMERYDVPALTEHAIRHLAE 67
Score = 53.5 bits (127), Expect = 2e-06
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -1
Query: 76 ARSLTVFIDRALEPVRPWLEDDQVV 2
ARSLTVFIDRALEP+RPWLEDDQVV
Sbjct: 5 ARSLTVFIDRALEPIRPWLEDDQVV 29
>BAV52652.1 type II secretion system protein E (plasmid) [Mesorhizobium loti]
Length = 352
Score = 57.0 bits (136), Expect = 1e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPG VWVERFGQ+AME H V +LTE AIRHLAE
Sbjct: 35 GPGAVWVERFGQSAMEHHDVPELTETAIRHLAE 67
>SCB50232.1 type IV secretion system protein VirB10 [Rhizobium multihospitium]
Length = 449
Score = 57.0 bits (136), Expect = 1e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 152 RRADFSAFYPDPVKEALQEIRRERAGQKPD 63
R DFSAFYPDPVKEALQEI+RERAGQKP+
Sbjct: 417 RDLDFSAFYPDPVKEALQEIKRERAGQKPN 446
>WP_069694316.1 P-type DNA transfer ATPase VirB11 [Bosea vaviloviae] AOO85133.1
P-type DNA transfer ATPase VirB11 (plasmid) [Bosea
vaviloviae]
Length = 352
Score = 53.5 bits (127), Expect = 2e-06
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = -1
Query: 244 GPGEVWVERFGQAAMERHVVDQLTEQAIRHLAE 146
GPGE++VERFGQAAMERH + +LT AIRHL E
Sbjct: 35 GPGEIFVERFGQAAMERHALPELTAAAIRHLNE 67
>BAV52651.1 conjugation TrbI-like protein (plasmid) [Mesorhizobium loti]
Length = 452
Score = 52.8 bits (125), Expect = 4e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -3
Query: 152 RRADFSAFYPDPVKEALQEIRRERAGQKPD 63
R DFSA YPDPVKEALQE++RER+G KPD
Sbjct: 419 RDLDFSALYPDPVKEALQELKRERSGSKPD 448