BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00033928
         (365 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EEY33107.1 RNA polymerase sigma factor RpoD [Brucella suis bv. 3...   211   2e-67
ODT08647.1 RNA polymerase sigma factor RpoD, partial [Mesorhizob...   211   2e-67
ODN68977.1 RNA polymerase sigma factor RpoD [Methylobrevis pamuk...   211   3e-67
WP_069308000.1 RNA polymerase sigma factor RpoD, partial [Methyl...   211   7e-67
CEG07185.1 Sigma-70 [Afipia felis]                                    216   1e-66
CCE11966.1 sigma D (sigma 70) factor of RNA polymerase (fragment...   216   1e-66
KIZ37301.1 RNA polymerase sigma factor RpoD, partial [Rhodopseud...   216   2e-66
CEP27985.1 RNA polymerase sigma factor, partial [Agrobacterium v...   211   2e-66
CEP27984.1 RNA polymerase sigma factor, partial [Rhizobium skier...   211   2e-66
CEP27982.1 RNA polymerase sigma factor, partial [Rhizobium pusense]   211   2e-66
CEP27979.1 RNA polymerase sigma factor, partial [Agrobacterium t...   211   2e-66
CEP27978.1 RNA polymerase sigma factor, partial [Agrobacterium s...   211   2e-66
CEP27966.1 RNA polymerase sigma factor, partial [Pararhizobium s...   211   2e-66
CEP27964.1 RNA polymerase sigma factor, partial [Pararhizobium s...   211   2e-66
CEP27962.1 RNA polymerase sigma factor, partial [Agrobacterium s...   211   2e-66
CEP27958.1 RNA polymerase sigma factor, partial [Agrobacterium r...   211   2e-66
CEP27957.1 RNA polymerase sigma factor, partial [Pararhizobium s...   211   2e-66
CEP27953.1 RNA polymerase sigma factor, partial [Agrobacterium r...   211   2e-66
CEP27952.1 RNA polymerase sigma factor, partial [Agrobacterium s...   211   2e-66
CEP27951.1 RNA polymerase sigma factor, partial [Pararhizobium s...   211   2e-66

>EEY33107.1 RNA polymerase sigma factor RpoD [Brucella suis bv. 3 str. 686]
          Length = 235

 Score =  211 bits (538), Expect = 2e-67
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 2   VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 61

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 62  TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 121

Query: 5   I 3
           I
Sbjct: 122 I 122


>ODT08647.1 RNA polymerase sigma factor RpoD, partial [Mesorhizobium sp. SCN
           65-20]
          Length = 236

 Score =  211 bits (538), Expect = 2e-67
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 3   VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 62

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 63  TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 122

Query: 5   I 3
           I
Sbjct: 123 I 123


>ODN68977.1 RNA polymerase sigma factor RpoD [Methylobrevis pamukkalensis]
          Length = 249

 Score =  211 bits (538), Expect = 3e-67
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 16  VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 75

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 76  TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 135

Query: 5   I 3
           I
Sbjct: 136 I 136


>WP_069308000.1 RNA polymerase sigma factor RpoD, partial [Methylobrevis
           pamukkalensis]
          Length = 272

 Score =  211 bits (538), Expect = 7e-67
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 39  VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 98

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 99  TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 158

Query: 5   I 3
           I
Sbjct: 159 I 159


>CEG07185.1 Sigma-70 [Afipia felis]
          Length = 421

 Score =  216 bits (549), Expect = 1e-66
 Identities = 104/121 (85%), Positives = 117/121 (96%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 188 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 247

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK
Sbjct: 248 TRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 307

Query: 5   I 3
           I
Sbjct: 308 I 308


>CCE11966.1 sigma D (sigma 70) factor of RNA polymerase (fragment)
           [Bradyrhizobium sp. STM 3843]
          Length = 430

 Score =  216 bits (549), Expect = 1e-66
 Identities = 104/121 (85%), Positives = 117/121 (96%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 197 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 256

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK
Sbjct: 257 TRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 316

Query: 5   I 3
           I
Sbjct: 317 I 317


>KIZ37301.1 RNA polymerase sigma factor RpoD, partial [Rhodopseudomonas
           palustris]
          Length = 446

 Score =  216 bits (549), Expect = 2e-66
 Identities = 104/121 (85%), Positives = 117/121 (96%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 213 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 272

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK
Sbjct: 273 TRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 332

Query: 5   I 3
           I
Sbjct: 333 I 333


>CEP27985.1 RNA polymerase sigma factor, partial [Agrobacterium vitis]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27984.1 RNA polymerase sigma factor, partial [Rhizobium skierniewicense
           Ch11]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27982.1 RNA polymerase sigma factor, partial [Rhizobium pusense]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27979.1 RNA polymerase sigma factor, partial [Agrobacterium tumefaciens]
           CEP27981.1 RNA polymerase sigma factor, partial
           [Agrobacterium tumefaciens]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27978.1 RNA polymerase sigma factor, partial [Agrobacterium sp. G9.8]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27966.1 RNA polymerase sigma factor, partial [Pararhizobium sp. CP12.3]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27964.1 RNA polymerase sigma factor, partial [Pararhizobium sp. C16.3]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27962.1 RNA polymerase sigma factor, partial [Agrobacterium sp. C1.6]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27958.1 RNA polymerase sigma factor, partial [Agrobacterium rhizogenes]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27957.1 RNA polymerase sigma factor, partial [Pararhizobium sp. AL31.8]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27953.1 RNA polymerase sigma factor, partial [Agrobacterium rhizogenes]
           CEP27954.1 RNA polymerase sigma factor, partial
           [Agrobacterium rhizogenes] CEP27955.1 RNA polymerase
           sigma factor, partial [Agrobacterium rhizogenes]
           CEP27977.1 RNA polymerase sigma factor, partial
           [Agrobacterium rhizogenes]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27952.1 RNA polymerase sigma factor, partial [Agrobacterium sp. AL20.5]
           CEP27959.1 RNA polymerase sigma factor, partial
           [Agrobacterium arsenijevicii] CEP27960.1 RNA polymerase
           sigma factor, partial [Agrobacterium sp. AL51.5]
           CEP27961.1 RNA polymerase sigma factor, partial
           [Agrobacterium sp. AL59.6] CEP27963.1 RNA polymerase
           sigma factor, partial [Agrobacterium sp. C10.2]
           CEP27965.1 RNA polymerase sigma factor, partial
           [Rhizobium nepotum] CEP27968.1 RNA polymerase sigma
           factor, partial [Rhizobium nepotum] CEP27974.1 RNA
           polymerase sigma factor, partial [Rhizobium nepotum]
           CEP27980.1 RNA polymerase sigma factor, partial
           [Agrobacterium sp. G10.1] CEP27983.1 RNA polymerase
           sigma factor, partial [Rhizobium nepotum 39/7]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264


>CEP27951.1 RNA polymerase sigma factor, partial [Pararhizobium sp. A4.1]
           CEP27956.1 RNA polymerase sigma factor, partial
           [Pararhizobium polonicum] CEP27967.1 RNA polymerase
           sigma factor, partial [Pararhizobium polonicum]
           CEP27969.1 RNA polymerase sigma factor, partial
           [Pararhizobium sp. CP18.4] CEP27970.1 RNA polymerase
           sigma factor, partial [Pararhizobium sp. CP19.6]
           CEP27971.1 RNA polymerase sigma factor, partial
           [Pararhizobium polonicum] CEP27972.1 RNA polymerase
           sigma factor, partial [Pararhizobium sp. CP4.7]
           CEP27973.1 RNA polymerase sigma factor, partial
           [Pararhizobium sp. CP13.7] CEP27975.1 RNA polymerase
           sigma factor, partial [Pararhizobium polonicum]
           CEP27976.1 RNA polymerase sigma factor, partial
           [Pararhizobium polonicum]
          Length = 313

 Score =  211 bits (538), Expect = 2e-66
 Identities = 102/121 (84%), Positives = 116/121 (95%)
 Frame = -1

Query: 365 LEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI 186
           +EANLRLV+S+AK+YT RG+  LDLIQEGN+GL++AV+KF+Y +GYKFSTYATWWIRQAI
Sbjct: 144 VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAI 203

Query: 185 TRAMADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLK 6
           TR++ADQARTIRIPVHMIETINKIVRTSRQML+EIGREPTPEELAEKL MPLEKVRKVLK
Sbjct: 204 TRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLK 263

Query: 5   I 3
           I
Sbjct: 264 I 264