BLASTX nr result

ID: Glycyrrhiza28_contig00033610 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00033610
         (357 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU10986.1 hypothetical protein TSUD_112790 [Trifolium subterran...    69   2e-11
XP_014500456.1 PREDICTED: pentatricopeptide repeat-containing pr...    67   2e-10
XP_003546945.2 PREDICTED: pentatricopeptide repeat-containing pr...    66   3e-10
KHN32627.1 Golgin candidate 5 [Glycine soja]                           62   1e-08
BAT91610.1 hypothetical protein VIGAN_07021800 [Vigna angularis ...    61   2e-08
XP_017423925.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   2e-08
XP_003597735.1 PPR containing plant protein [Medicago truncatula...    58   2e-07
XP_007150636.1 hypothetical protein PHAVU_005G169000g [Phaseolus...    54   7e-06

>GAU10986.1 hypothetical protein TSUD_112790 [Trifolium subterraneum]
          Length = 275

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 38/77 (49%), Positives = 43/77 (55%)
 Frame = -3

Query: 232 MSFYSIKKTQEXXXXXXXXXXXXXXXXLYHSFATQQIPQHNPFPSKDQVDPFPPSPTSYC 53
           MSFYSI+KT++                 YHS ATQQ P          V  F PSPT+YC
Sbjct: 1   MSFYSIQKTRQTSTISFLFNLFSISESSYHSLATQQTPF---------VHSFSPSPTTYC 51

Query: 52  YTSLLQSCIAAKALRPG 2
           YTSLLQSCI +KAL PG
Sbjct: 52  YTSLLQSCIDSKALNPG 68


>XP_014500456.1 PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vigna radiata var. radiata]
          Length = 652

 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 44/96 (45%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
 Frame = -3

Query: 253 VFFLRNQMSFYSIKKTQEXXXXXXXXXXXXXXXXL----------YHSFATQQIPQHNPF 104
           +F   NQMSF SI+KTQE                +          Y SFA QQIPQH PF
Sbjct: 3   LFHFINQMSFCSIRKTQETSRILSTFSFSFKILPVSPSYLQPRLLYCSFAAQQIPQHYPF 62

Query: 103 PSKD-QVDPFPPSPTS-YCYTSLLQSCIAAKALRPG 2
            S+  QV  FP SP++ Y Y SLL+SCI+ KAL PG
Sbjct: 63  TSRHAQVQSFPLSPSNHYYYASLLESCISVKALGPG 98


>XP_003546945.2 PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max] KRH09887.1 hypothetical
           protein GLYMA_15G016600 [Glycine max]
          Length = 640

 Score = 66.2 bits (160), Expect = 3e-10
 Identities = 43/90 (47%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
 Frame = -3

Query: 250 FFLRNQMSFYSIKKTQEXXXXXXXXXXXXXXXXL------YHSFATQQIPQHNPFPSKDQ 89
           F LRNQMSF SI+KTQE                +      + SFATQ IPQH       +
Sbjct: 4   FSLRNQMSFSSIRKTQETSRILSILSFSLNLFPVSPYYFLHQSFATQLIPQH-------K 56

Query: 88  VDPFPPSPTS-YCYTSLLQSCIAAKALRPG 2
           VD FP SP++ Y Y SLL+SCI+AKAL PG
Sbjct: 57  VDSFPSSPSNHYYYASLLESCISAKALEPG 86


>KHN32627.1 Golgin candidate 5 [Glycine soja]
          Length = 1396

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 42/90 (46%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
 Frame = -3

Query: 232 MSFYSIKKTQEXXXXXXXXXXXXXXXXL------------YHSFATQQIPQHNPFPSKDQ 89
           MSF SI+KTQE                +            YHSFATQQIP HN       
Sbjct: 1   MSFSSIRKTQETSRILSILSFSLNLFPVSPPYFLPQPQVSYHSFATQQIPWHN------- 53

Query: 88  VDPFPPSPTS-YCYTSLLQSCIAAKALRPG 2
           VD FP SP++ Y Y SLL SCIAAKAL PG
Sbjct: 54  VDSFPSSPSNHYHYASLLDSCIAAKALEPG 83


>BAT91610.1 hypothetical protein VIGAN_07021800 [Vigna angularis var.
           angularis]
          Length = 318

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
 Frame = -3

Query: 148 YHSFATQQIPQHNPFPSKD-QVDPFPPSPTS-YCYTSLLQSCIAAKALRPG 2
           Y SFAT QIPQH PF S+  QV  FP SP++ YCY  LL+SCI+ KAL PG
Sbjct: 33  YCSFATPQIPQHYPFTSRHAQVQSFPLSPSNHYCYALLLESCISVKALGPG 83


>XP_017423925.1 PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vigna angularis] KOM44511.1 hypothetical
           protein LR48_Vigan05g211600 [Vigna angularis]
          Length = 637

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
 Frame = -3

Query: 148 YHSFATQQIPQHNPFPSKD-QVDPFPPSPTS-YCYTSLLQSCIAAKALRPG 2
           Y SFAT QIPQH PF S+  QV  FP SP++ YCY  LL+SCI+ KAL PG
Sbjct: 33  YCSFATPQIPQHYPFTSRHAQVQSFPLSPSNHYCYALLLESCISVKALGPG 83


>XP_003597735.1 PPR containing plant protein [Medicago truncatula] ABD32288.1
           Tetratricopeptide-like helical [Medicago truncatula]
           AES67986.1 PPR containing plant protein [Medicago
           truncatula]
          Length = 620

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 38/78 (48%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -3

Query: 232 MSFYSIKKTQEXXXXXXXXXXXXXXXXLYHSFATQQIPQHNPFPSKDQVDPFPPSPTS-Y 56
           MSFYSIKKTQ                  YHS AT Q            VD FPP PT+ Y
Sbjct: 1   MSFYSIKKTQHTSFIFNLFPFSQSF---YHSLATHQTAS---------VDSFPPQPTTHY 48

Query: 55  CYTSLLQSCIAAKALRPG 2
            YTSLLQSCI +KAL PG
Sbjct: 49  GYTSLLQSCIDSKALNPG 66


>XP_007150636.1 hypothetical protein PHAVU_005G169000g [Phaseolus vulgaris]
           ESW22630.1 hypothetical protein PHAVU_005G169000g
           [Phaseolus vulgaris]
          Length = 631

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
 Frame = -3

Query: 250 FFLRNQMSFYSIKKTQEXXXXXXXXXXXXXXXXL---YHSFATQQIPQHNPFPSKDQVDP 80
           F+L N MSF SI+KTQE                    YHS   Q             V  
Sbjct: 4   FYLMNVMSFCSIRKTQETSRILSTLSFSFKIFQPRLLYHSLHAQ-------------VQS 50

Query: 79  FPPSPTS-YCYTSLLQSCIAAKALRPG 2
           FP SP++ YCY SLL+SCI+ KALRPG
Sbjct: 51  FPSSPSNHYCYASLLESCISLKALRPG 77


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