BLASTX nr result
ID: Glycyrrhiza28_contig00033113
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00033113
(279 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERF82250.1 FdhD protein [Bradyrhizobium sp. DFCI-1] 171 3e-50
OCX25925.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016] 171 5e-50
WP_036045106.1 integrase [Bradyrhizobium yuanmingense] 168 5e-49
KIU54449.1 integrase, partial [Bradyrhizobium elkanii] 162 9e-49
WP_043855073.1 integrase [Bradyrhizobium elkanii] KIU52644.1 int... 164 1e-47
ABE65096.1 phage integrase (plasmid) [Nitrobacter hamburgensis X14] 165 2e-47
WP_024584213.1 integrase [Bradyrhizobium sp. OHSU_III] 164 2e-47
WP_035697115.1 integrase [Bradyrhizobium liaoningense] 163 3e-47
BAR63251.1 integrase/recombinase protein (plasmid) [Bradyrhizobi... 162 4e-47
WP_012564771.1 integrase [Oligotropha carboxidovorans] ACI94747.... 163 4e-47
OCX26010.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016] 162 5e-47
WP_002719015.1 hypothetical protein [Afipia felis] EKS26839.1 hy... 163 5e-47
WP_024584968.1 integrase [Bradyrhizobium sp. OHSU_III] 162 6e-47
WP_015822435.1 integrase [Methylobacterium extorquens] CAX24244.... 161 2e-46
WP_019200229.1 MULTISPECIES: integrase [Bradyrhizobiaceae] 159 2e-45
SDF01826.1 Site-specific recombinase XerD [Bradyrhizobium sp. R5] 159 2e-45
WP_044414607.1 MULTISPECIES: integrase [Bradyrhizobiaceae] KIZ39... 157 5e-45
WP_048758122.1 integrase [Afipia felis] CEG10450.1 site-specific... 157 1e-44
EKS32932.1 hypothetical protein HMPREF9695_04947 [Afipia broomea... 153 4e-44
WP_061979180.1 MULTISPECIES: integrase [Bradyrhizobium] 155 4e-44
>ERF82250.1 FdhD protein [Bradyrhizobium sp. DFCI-1]
Length = 390
Score = 171 bits (433), Expect = 3e-50
Identities = 85/92 (92%), Positives = 88/92 (95%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADI +GPIFRAIDRWEAVEERALTPQSINLIVKRRCA
Sbjct: 268 ADEAGRVLLVGPPVEALREWLERADISRGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA
Sbjct: 328 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 359
>OCX25925.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]
Length = 390
Score = 171 bits (432), Expect = 5e-50
Identities = 84/92 (91%), Positives = 88/92 (95%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADIGKGPIFRAIDRWEA+EERALTPQSINLIVKRRCA
Sbjct: 268 ADETGRVLLVGPPVEALREWLERADIGKGPIFRAIDRWEAIEERALTPQSINLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ REFSAHGLRSGYLTEAAQRGVSLPEA
Sbjct: 328 MAGLEPREFSAHGLRSGYLTEAAQRGVSLPEA 359
>WP_036045106.1 integrase [Bradyrhizobium yuanmingense]
Length = 390
Score = 168 bits (425), Expect = 5e-49
Identities = 82/92 (89%), Positives = 88/92 (95%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
A DEGRVFLVG PVEALREWL RADI KGP+FRAIDRWEA+EERALTPQSINLIVKRRCA
Sbjct: 268 ASDEGRVFLVGPPVEALREWLHRADITKGPVFRAIDRWEAIEERALTPQSINLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+AREFSAHGLR+GYLTEAA+RGV+LPEA
Sbjct: 328 MAGLEAREFSAHGLRAGYLTEAARRGVALPEA 359
>KIU54449.1 integrase, partial [Bradyrhizobium elkanii]
Length = 224
Score = 162 bits (411), Expect = 9e-49
Identities = 79/92 (85%), Positives = 86/92 (93%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADI KGPIFRAIDRWEA EERALTPQSINLI+KRRCA
Sbjct: 102 ADEAGRVLLVGPPVEALREWLERADIAKGPIFRAIDRWEATEERALTPQSINLIIKRRCA 161
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ REFSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 162 MAGLEPREFSAHGLRSGYLTEAARQGVALPEA 193
>WP_043855073.1 integrase [Bradyrhizobium elkanii] KIU52644.1 integrase
[Bradyrhizobium elkanii]
Length = 390
Score = 164 bits (416), Expect = 1e-47
Identities = 81/92 (88%), Positives = 87/92 (94%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADI KGPIFRAIDRWEAVEERALTPQSINLIVKRRCA
Sbjct: 268 ADEAGRVLLVGPPVEALREWLERADIAKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ REFSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 328 MAGLEPREFSAHGLRSGYLTEAARQGVALPEA 359
>ABE65096.1 phage integrase (plasmid) [Nitrobacter hamburgensis X14]
Length = 422
Score = 165 bits (417), Expect = 2e-47
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADIGKGPIFRAIDRWEA+EERALTPQSINLIVKRRC
Sbjct: 268 ADEAGRVLLVGPPVEALREWLERADIGKGPIFRAIDRWEAIEERALTPQSINLIVKRRCV 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ REFSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 328 MAGLEPREFSAHGLRSGYLTEAARQGVALPEA 359
>WP_024584213.1 integrase [Bradyrhizobium sp. OHSU_III]
Length = 390
Score = 164 bits (414), Expect = 2e-47
Identities = 80/92 (86%), Positives = 86/92 (93%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADI +GPIFRAIDRWEAVEE+ALTPQSINLIVKRRC
Sbjct: 268 ADEAGRVLLVGPPVEALREWLERADIARGPIFRAIDRWEAVEEKALTPQSINLIVKRRCV 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
+AGL+ REFSAHGLRSGYLTEAAQRGVSLPEA
Sbjct: 328 LAGLEPREFSAHGLRSGYLTEAAQRGVSLPEA 359
>WP_035697115.1 integrase [Bradyrhizobium liaoningense]
Length = 390
Score = 163 bits (413), Expect = 3e-47
Identities = 80/92 (86%), Positives = 86/92 (93%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
A DEGRV LVG PVEAL EWL RADI +GPIFRAIDRWEA+EERALTPQSINLIVKRRCA
Sbjct: 268 ASDEGRVLLVGPPVEALHEWLLRADISQGPIFRAIDRWEAIEERALTPQSINLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGLDAREFSAHGLR+GYLTEAA+RG++LPEA
Sbjct: 328 MAGLDAREFSAHGLRAGYLTEAARRGIALPEA 359
>BAR63251.1 integrase/recombinase protein (plasmid) [Bradyrhizobium
diazoefficiens]
Length = 335
Score = 162 bits (409), Expect = 4e-47
Identities = 79/92 (85%), Positives = 86/92 (93%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
A DEGRVFLVG PVEAL EWL RADI KGP+FRAID+WEA+EERALTPQSINLIVKRRCA
Sbjct: 213 ASDEGRVFLVGPPVEALLEWLHRADIMKGPVFRAIDQWEAIEERALTPQSINLIVKRRCA 272
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAG +AREFSAHGLR+GYLTEAA+RGV+LPEA
Sbjct: 273 MAGFEAREFSAHGLRAGYLTEAARRGVALPEA 304
>WP_012564771.1 integrase [Oligotropha carboxidovorans] ACI94747.1 phage integrase
[Oligotropha carboxidovorans OM5] AEI04734.1 phage
integrase (plasmid) [Oligotropha carboxidovorans OM4]
AEI08363.1 phage integrase (plasmid) [Oligotropha
carboxidovorans OM5]
Length = 390
Score = 163 bits (412), Expect = 4e-47
Identities = 79/92 (85%), Positives = 87/92 (94%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADI KGP+FRAIDRWEA+EERALTPQSINLIVKRRCA
Sbjct: 268 ADEAGRVLLVGPPVEALREWLERADISKGPVFRAIDRWEALEERALTPQSINLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ REFSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 328 MAGLEPREFSAHGLRSGYLTEAARQGVALPEA 359
>OCX26010.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]
Length = 376
Score = 162 bits (411), Expect = 5e-47
Identities = 79/92 (85%), Positives = 86/92 (93%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADI KGPIFRAIDRWEA EERALTPQSINLI+KRRCA
Sbjct: 268 ADEAGRVLLVGPPVEALREWLERADISKGPIFRAIDRWEATEERALTPQSINLIIKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ REFSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 328 MAGLEPREFSAHGLRSGYLTEAARQGVALPEA 359
>WP_002719015.1 hypothetical protein [Afipia felis] EKS26839.1 hypothetical protein
HMPREF9697_03955 [Afipia felis ATCC 53690]
Length = 393
Score = 163 bits (412), Expect = 5e-47
Identities = 79/92 (85%), Positives = 88/92 (95%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRVFLVG PVEALREWL+RADIGKGPIFRAIDRWEA+EERALTPQS+NLIVKRRCA
Sbjct: 268 ADEAGRVFLVGPPVEALREWLERADIGKGPIFRAIDRWEALEERALTPQSVNLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
+AGL+ REFSAHGLRSGYLTEAA++GV+L EA
Sbjct: 328 IAGLEPREFSAHGLRSGYLTEAARQGVALQEA 359
>WP_024584968.1 integrase [Bradyrhizobium sp. OHSU_III]
Length = 390
Score = 162 bits (411), Expect = 6e-47
Identities = 79/92 (85%), Positives = 86/92 (93%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RADI KGPIFRAIDRWEA EERALTPQSINLI+KRRCA
Sbjct: 268 ADEAGRVLLVGPPVEALREWLERADISKGPIFRAIDRWEATEERALTPQSINLIIKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ REFSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 328 MAGLEPREFSAHGLRSGYLTEAARQGVALPEA 359
>WP_015822435.1 integrase [Methylobacterium extorquens] CAX24244.1
integrase/recombinase protein [Methylobacterium
extorquens DM4]
Length = 390
Score = 161 bits (408), Expect = 2e-46
Identities = 78/92 (84%), Positives = 87/92 (94%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+RAD+ KGPIFRAIDRWEA+EERALTPQSINLIVKRRCA
Sbjct: 268 ADEAGRVLLVGPPVEALREWLERADVAKGPIFRAIDRWEALEERALTPQSINLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ R+FSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 328 MAGLEPRKFSAHGLRSGYLTEAARQGVALPEA 359
>WP_019200229.1 MULTISPECIES: integrase [Bradyrhizobiaceae]
Length = 389
Score = 159 bits (401), Expect = 2e-45
Identities = 77/92 (83%), Positives = 85/92 (92%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
ADDEGRVF+VG PVEALREWL RADI GP+FRAIDRWEA+EERALTPQSINLIVKRRCA
Sbjct: 267 ADDEGRVFVVGPPVEALREWLFRADIQTGPVFRAIDRWEAIEERALTPQSINLIVKRRCA 326
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MA LD REF+AHGLRSG+LTEAA++G+ LPEA
Sbjct: 327 MAELDPREFTAHGLRSGFLTEAARQGIGLPEA 358
>SDF01826.1 Site-specific recombinase XerD [Bradyrhizobium sp. R5]
Length = 409
Score = 159 bits (402), Expect = 2e-45
Identities = 78/92 (84%), Positives = 85/92 (92%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
ADD GRV LVG PV ALREWL+RADI GP+FRAIDRWEAVE+RALTPQSINLIVKRRC
Sbjct: 268 ADDAGRVLLVGPPVVALREWLERADITTGPVFRAIDRWEAVEDRALTPQSINLIVKRRCT 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+AREFSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 328 MAGLEAREFSAHGLRSGYLTEAARQGVALPEA 359
>WP_044414607.1 MULTISPECIES: integrase [Bradyrhizobiaceae] KIZ39782.1 integrase
[Rhodopseudomonas palustris] KQW18148.1 integrase
[Afipia sp. Root123D2]
Length = 390
Score = 157 bits (398), Expect = 5e-45
Identities = 75/92 (81%), Positives = 85/92 (92%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ G V L+G PV+ALREWL+RADI KGP+FRAIDRWEA+EER LTPQSINLIVKRRCA
Sbjct: 268 ADEGGGVLLIGPPVDALREWLERADIAKGPVFRAIDRWEAIEERTLTPQSINLIVKRRCA 327
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL+ REFSAHGLRSGYLTEAA++GV+LPEA
Sbjct: 328 MAGLEPREFSAHGLRSGYLTEAARQGVALPEA 359
>WP_048758122.1 integrase [Afipia felis] CEG10450.1 site-specific tyrosine
recombinase XerD [Afipia felis]
Length = 394
Score = 157 bits (396), Expect = 1e-44
Identities = 77/92 (83%), Positives = 84/92 (91%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRV LVG PVEALREWL+R DI KGPIFRAIDRWEA+EERALTPQSINLI+KRRCA
Sbjct: 269 ADEAGRVLLVGPPVEALREWLERGDISKGPIFRAIDRWEALEERALTPQSINLILKRRCA 328
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
MAGL REFSAHGLRSGYLTEAA++GV+ PEA
Sbjct: 329 MAGLGPREFSAHGLRSGYLTEAARQGVAPPEA 360
>EKS32932.1 hypothetical protein HMPREF9695_04947 [Afipia broomeae ATCC 49717]
Length = 308
Score = 153 bits (387), Expect = 4e-44
Identities = 73/92 (79%), Positives = 85/92 (92%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
AD+ GRVFLVG PVEALREWL+RADI +GPIFRAIDRWEA++ERALTPQSINLIVKRRC
Sbjct: 186 ADEAGRVFLVGPPVEALREWLERADIRRGPIFRAIDRWEALDERALTPQSINLIVKRRCE 245
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
+A LD +EF+AHGLR+GYLTEAA++G+ LPEA
Sbjct: 246 IAELDPKEFTAHGLRAGYLTEAARQGIGLPEA 277
>WP_061979180.1 MULTISPECIES: integrase [Bradyrhizobium]
Length = 389
Score = 155 bits (392), Expect = 4e-44
Identities = 75/92 (81%), Positives = 85/92 (92%)
Frame = -2
Query: 278 ADDEGRVFLVGLPVEALREWLDRADIGKGPIFRAIDRWEAVEERALTPQSINLIVKRRCA 99
ADDEGRVFLVG PV+ALREWL RADI KGPIFRAIDRWEA+EERALTPQSINLIVKRRC
Sbjct: 267 ADDEGRVFLVGPPVDALREWLTRADIHKGPIFRAIDRWEALEERALTPQSINLIVKRRCG 326
Query: 98 MAGLDAREFSAHGLRSGYLTEAAQRGVSLPEA 3
+A LD REF+AHGLR+GYLTEA+++G++L EA
Sbjct: 327 LAELDPREFAAHGLRAGYLTEASRQGIALQEA 358